RNA–Protein interactions for RNA: ENST00000460604.1

HIVEP3-203, Transcript of human immunodeficiency virus type I enhancer binding protein 3, humanhuman

TSL 2

Gene HIVEP3, Length 2,369 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIVEP3-203ENST00000460604 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
HIVEP3-203ENST00000460604 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.66
HIVEP3-203ENST00000460604 ZCCHC6Q5VYS8 1495 aaKnown RBP30.54■■■□□ 2.48
HIVEP3-203ENST00000460604 SHROOM4Q9ULL8 1493 aa30.22■■■□□ 2.43
HIVEP3-203ENST00000460604 DCAF8L2P0C7V8 631 aa30.04■■■□□ 2.4
HIVEP3-203ENST00000460604 DCAF1Q9Y4B6 1507 aa30.01■■■□□ 2.4
HIVEP3-203ENST00000460604 ABCC9O60706 1549 aa29.95■■■□□ 2.38
HIVEP3-203ENST00000460604 MYO15BQ96JP2 1530 aa29.64■■■□□ 2.33
HIVEP3-203ENST00000460604 NACADO15069 1562 aa29.47■■■□□ 2.31
HIVEP3-203ENST00000460604 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
HIVEP3-203ENST00000460604 RB1CC1Q8TDY2 1594 aa29.21■■■□□ 2.27
HIVEP3-203ENST00000460604 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
HIVEP3-203ENST00000460604 UNC13AQ9UPW8 1703 aa28.64■■■□□ 2.18
HIVEP3-203ENST00000460604 CHIC1Q5VXU3 224 aa28.55■■■□□ 2.16
HIVEP3-203ENST00000460604 RSF1Q96T23 1441 aaPredicted RBP28.41■■■□□ 2.14
HIVEP3-203ENST00000460604 BICRAQ9NZM4 1560 aa28.35■■■□□ 2.13
HIVEP3-203ENST00000460604 CECR2Q9BXF3 1484 aa28.26■■■□□ 2.11
HIVEP3-203ENST00000460604 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
HIVEP3-203ENST00000460604 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
HIVEP3-203ENST00000460604 BAZ1AQ9NRL2 1556 aaPredicted RBP28.05■■■□□ 2.08
HIVEP3-203ENST00000460604 SMARCA4P51532 1647 aa27.93■■■□□ 2.06
HIVEP3-203ENST00000460604 WIZO95785 1651 aa27.87■■■□□ 2.05
HIVEP3-203ENST00000460604 LOC105371045A0A1W2PR82 267 aa27.58■■■□□ 2.01
HIVEP3-203ENST00000460604 PEG3Q9GZU2 1588 aa27.57■■■□□ 2
HIVEP3-203ENST00000460604 TOP2AP11388 1531 aaKnown RBP27.56■■■□□ 2
HIVEP3-203ENST00000460604 TRIM41Q8WV44 630 aa27.53■■■□□ 2
HIVEP3-203ENST00000460604 EIF4G1Q04637 1599 aaKnown RBP27.5■■□□□ 1.99
HIVEP3-203ENST00000460604 HRCP23327 699 aa27.49■■□□□ 1.99
HIVEP3-203ENST00000460604 ATAD2BQ9ULI0 1458 aa27.46■■□□□ 1.99
HIVEP3-203ENST00000460604 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
HIVEP3-203ENST00000460604 PCGF6Q9BYE7 350 aa27.34■■□□□ 1.97
HIVEP3-203ENST00000460604 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
HIVEP3-203ENST00000460604 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
HIVEP3-203ENST00000460604 NCAPD3P42695 1498 aa27.2■■□□□ 1.95
HIVEP3-203ENST00000460604 HMGXB3Q12766 1538 aa27.17■■□□□ 1.94
HIVEP3-203ENST00000460604 FAM9AQ8IZU1 332 aaPredicted RBP27.16■■□□□ 1.94
HIVEP3-203ENST00000460604 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
HIVEP3-203ENST00000460604 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
HIVEP3-203ENST00000460604 PPARGC1BQ86YN6 1023 aaKnown RBP26.87■■□□□ 1.89
HIVEP3-203ENST00000460604 EHMT2Q96KQ7 1210 aa26.83■■□□□ 1.88
HIVEP3-203ENST00000460604 TRIM26Q12899 539 aaPredicted RBP26.81■■□□□ 1.88
HIVEP3-203ENST00000460604 SOGA1O94964 1423 aa26.68■■□□□ 1.86
HIVEP3-203ENST00000460604 WRNQ14191 1432 aaPredicted RBP eCLIP26.67■■□□□ 1.86
HIVEP3-203ENST00000460604 CFTRP13569 1480 aa26.62■■□□□ 1.85
HIVEP3-203ENST00000460604 EEA1Q15075 1411 aa26.61■■□□□ 1.85
HIVEP3-203ENST00000460604 SYNJ1O43426 1573 aa26.57■■□□□ 1.84
HIVEP3-203ENST00000460604 RUSC2Q8N2Y8 1516 aa26.57■■□□□ 1.84
HIVEP3-203ENST00000460604 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
HIVEP3-203ENST00000460604 CSRNP3Q8WYN3 585 aa26.5■■□□□ 1.83
HIVEP3-203ENST00000460604 PRDM2Q13029 1718 aa26.47■■□□□ 1.83
HIVEP3-203ENST00000460604 DNAJC5BQ9UF47 199 aa26.43■■□□□ 1.82
HIVEP3-203ENST00000460604 TNIKQ9UKE5 1360 aa26.43■■□□□ 1.82
HIVEP3-203ENST00000460604 CEP162Q5TB80 1403 aa26.38■■□□□ 1.81
HIVEP3-203ENST00000460604 GOLGA3Q08378 1498 aa26.34■■□□□ 1.81
HIVEP3-203ENST00000460604 TOP2BQ02880 1626 aa26.34■■□□□ 1.81
HIVEP3-203ENST00000460604 NESP48681 1621 aa26.31■■□□□ 1.8
HIVEP3-203ENST00000460604 ZEB1P37275 1124 aaPredicted RBP26.3■■□□□ 1.8
HIVEP3-203ENST00000460604 BIVM-ERCC5R4GMW8 1640 aa26.29■■□□□ 1.8
HIVEP3-203ENST00000460604 LAMC3Q9Y6N6 1575 aa26.27■■□□□ 1.8
HIVEP3-203ENST00000460604 KIF21BO75037 1637 aa26.27■■□□□ 1.8
HIVEP3-203ENST00000460604 CUX1P39880 1505 aa26.27■■□□□ 1.8
HIVEP3-203ENST00000460604 CEP164Q9UPV0 1460 aa26.26■■□□□ 1.79
HIVEP3-203ENST00000460604 UBTFP17480 764 aaKnown RBP26.25■■□□□ 1.79
HIVEP3-203ENST00000460604 FANCD2Q9BXW9 1451 aa26.24■■□□□ 1.79
HIVEP3-203ENST00000460604 RAPGEF2Q9Y4G8 1499 aa26.08■■□□□ 1.77
HIVEP3-203ENST00000460604 PDS5BQ9NTI5 1447 aa26.07■■□□□ 1.76
HIVEP3-203ENST00000460604 DNMBPQ6XZF7 1577 aa26■■□□□ 1.75
HIVEP3-203ENST00000460604 CLIP1P30622 1438 aa25.99■■□□□ 1.75
HIVEP3-203ENST00000460604 KIF21AQ7Z4S6 1674 aa25.97■■□□□ 1.75
HIVEP3-203ENST00000460604 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
HIVEP3-203ENST00000460604 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
HIVEP3-203ENST00000460604 PRXQ9BXM0 1461 aa25.96■■□□□ 1.75
HIVEP3-203ENST00000460604 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
HIVEP3-203ENST00000460604 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
HIVEP3-203ENST00000460604 KIF27Q86VH2 1401 aa25.9■■□□□ 1.74
HIVEP3-203ENST00000460604 TTBK1Q5TCY1 1321 aaPredicted RBP25.87■■□□□ 1.73
HIVEP3-203ENST00000460604 VPS8Q8N3P4 1428 aa25.86■■□□□ 1.73
HIVEP3-203ENST00000460604 POLA1P09884 1462 aaPredicted RBP25.84■■□□□ 1.73
HIVEP3-203ENST00000460604 CUX2O14529 1486 aa25.82■■□□□ 1.72
HIVEP3-203ENST00000460604 RAD54L2Q9Y4B4 1467 aa25.77■■□□□ 1.72
HIVEP3-203ENST00000460604 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
HIVEP3-203ENST00000460604 ABCA10Q8WWZ4 1543 aa25.73■■□□□ 1.71
HIVEP3-203ENST00000460604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.72■■□□□ 1.71
HIVEP3-203ENST00000460604 RANGAP1P46060 587 aaPredicted RBP25.7■■□□□ 1.71
HIVEP3-203ENST00000460604 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
HIVEP3-203ENST00000460604 IGF1RP08069 1367 aa25.66■■□□□ 1.7
HIVEP3-203ENST00000460604 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
HIVEP3-203ENST00000460604 WDR97A6NE52 1622 aa25.64■■□□□ 1.7
HIVEP3-203ENST00000460604 CCER1Q8TC90 406 aaPredicted RBP25.64■■□□□ 1.7
HIVEP3-203ENST00000460604 WDR62O43379 1518 aa25.61■■□□□ 1.69
HIVEP3-203ENST00000460604 APLP2Q06481 763 aa25.58■■□□□ 1.68
HIVEP3-203ENST00000460604 TARBP1Q13395 1621 aaKnown RBP25.56■■□□□ 1.68
HIVEP3-203ENST00000460604 THOC2Q8NI27 1593 aaKnown RBP25.53■■□□□ 1.68
HIVEP3-203ENST00000460604 ABCA5Q8WWZ7 1642 aa25.52■■□□□ 1.68
HIVEP3-203ENST00000460604 CARMIL1Q5VZK9 1371 aa25.52■■□□□ 1.68
HIVEP3-203ENST00000460604 TDRD9Q8NDG6 1382 aaKnown RBP25.52■■□□□ 1.68
HIVEP3-203ENST00000460604 ARHGAP35Q9NRY4 1499 aa25.51■■□□□ 1.67
HIVEP3-203ENST00000460604 GAPVD1Q14C86 1478 aa25.47■■□□□ 1.67
HIVEP3-203ENST00000460604 IFT140Q96RY7 1462 aa25.43■■□□□ 1.66
HIVEP3-203ENST00000460604 CUL7Q14999 1698 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms