RNA–Protein interactions for RNA: ENST00000459588.1

RNU6-1208P-201, Transcript of RNA, U6 small nuclear 1208, pseudogene, humanhuman

BASIC

Gene RNU6-1208P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1208P-201ENST00000459588 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
RNU6-1208P-201ENST00000459588 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
RNU6-1208P-201ENST00000459588 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
RNU6-1208P-201ENST00000459588 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
RNU6-1208P-201ENST00000459588 FOXD1Q16676 465 aa17.37■□□□□ 0.37
RNU6-1208P-201ENST00000459588 POTEDQ86YR6 584 aa16.57■□□□□ 0.24
RNU6-1208P-201ENST00000459588 MSH5O43196 834 aa16.55■□□□□ 0.24
RNU6-1208P-201ENST00000459588 PIAS4Q8N2W9 510 aaPredicted RBP16.26■□□□□ 0.19
RNU6-1208P-201ENST00000459588 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
RNU6-1208P-201ENST00000459588 ADRA2BP18089 450 aa15.92■□□□□ 0.14
RNU6-1208P-201ENST00000459588 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
RNU6-1208P-201ENST00000459588 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
RNU6-1208P-201ENST00000459588 DMRT2Q9Y5R5 561 aa14.74□□□□□ -0.05
RNU6-1208P-201ENST00000459588 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
RNU6-1208P-201ENST00000459588 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
RNU6-1208P-201ENST00000459588 DCAF8L1A6NGE4 600 aa14.3□□□□□ -0.12
RNU6-1208P-201ENST00000459588 PPP4R3CPQ6ZMV5 832 aa14.12□□□□□ -0.15
RNU6-1208P-201ENST00000459588 HOXD11P31277 338 aaPredicted RBP14.04□□□□□ -0.16
RNU6-1208P-201ENST00000459588 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
RNU6-1208P-201ENST00000459588 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
RNU6-1208P-201ENST00000459588 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
RNU6-1208P-201ENST00000459588 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
RNU6-1208P-201ENST00000459588 DNAJC5BQ9UF47 199 aa13.68□□□□□ -0.22
RNU6-1208P-201ENST00000459588 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
RNU6-1208P-201ENST00000459588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.53□□□□□ -0.24
RNU6-1208P-201ENST00000459588 NPM3O75607 178 aaKnown RBP13.23□□□□□ -0.29
RNU6-1208P-201ENST00000459588 CAPN15O75808 1086 aa13.1□□□□□ -0.31
RNU6-1208P-201ENST00000459588 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
RNU6-1208P-201ENST00000459588 POTEHQ6S545 545 aa12.98□□□□□ -0.33
RNU6-1208P-201ENST00000459588 DSG3P32926 999 aa12.97□□□□□ -0.33
RNU6-1208P-201ENST00000459588 SPINK5Q9NQ38 1064 aaPredicted RBP12.95□□□□□ -0.34
RNU6-1208P-201ENST00000459588 APLP2Q06481 763 aa12.94□□□□□ -0.34
RNU6-1208P-201ENST00000459588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
RNU6-1208P-201ENST00000459588 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
RNU6-1208P-201ENST00000459588 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
RNU6-1208P-201ENST00000459588 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
RNU6-1208P-201ENST00000459588 ABCB7O75027 752 aa12.68□□□□□ -0.38
RNU6-1208P-201ENST00000459588 SLC4A2P04920 1241 aa12.66□□□□□ -0.38
RNU6-1208P-201ENST00000459588 KCNA4P22459 653 aa12.66□□□□□ -0.38
RNU6-1208P-201ENST00000459588 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
RNU6-1208P-201ENST00000459588 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
RNU6-1208P-201ENST00000459588 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
RNU6-1208P-201ENST00000459588 POLA2Q14181 598 aa12.33□□□□□ -0.44
RNU6-1208P-201ENST00000459588 CHRDL2Q6WN34 429 aa12.31□□□□□ -0.44
RNU6-1208P-201ENST00000459588 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
RNU6-1208P-201ENST00000459588 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
RNU6-1208P-201ENST00000459588 SP7Q8TDD2 431 aaPredicted RBP12.02□□□□□ -0.49
RNU6-1208P-201ENST00000459588 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
RNU6-1208P-201ENST00000459588 SLC4A1APQ9BWU0 796 aaKnown RBP12□□□□□ -0.49
RNU6-1208P-201ENST00000459588 REM2Q8IYK8 340 aaPredicted RBP11.96□□□□□ -0.49
RNU6-1208P-201ENST00000459588 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
RNU6-1208P-201ENST00000459588 HAX1O00165 279 aa11.9□□□□□ -0.5
RNU6-1208P-201ENST00000459588 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
RNU6-1208P-201ENST00000459588 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.5
RNU6-1208P-201ENST00000459588 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
RNU6-1208P-201ENST00000459588 FXR2P51116 673 aaKnown RBP eCLIP11.77□□□□□ -0.53
RNU6-1208P-201ENST00000459588 FBLN2P98095 1184 aa11.75□□□□□ -0.53
RNU6-1208P-201ENST00000459588 ATXN8OSP0DMR3 200 aa11.71□□□□□ -0.53
RNU6-1208P-201ENST00000459588 SPDYE2BA6NHP3 402 aa11.7□□□□□ -0.54
RNU6-1208P-201ENST00000459588 SPDYE6P0CI01 402 aa11.7□□□□□ -0.54
RNU6-1208P-201ENST00000459588 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
RNU6-1208P-201ENST00000459588 SPDYE1Q8NFV5 336 aaPredicted RBP11.62□□□□□ -0.55
RNU6-1208P-201ENST00000459588 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
RNU6-1208P-201ENST00000459588 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
RNU6-1208P-201ENST00000459588 ZBTB22O15209 634 aa11.53□□□□□ -0.56
RNU6-1208P-201ENST00000459588 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
RNU6-1208P-201ENST00000459588 EVX2Q03828 476 aa11.49□□□□□ -0.57
RNU6-1208P-201ENST00000459588 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
RNU6-1208P-201ENST00000459588 SSUH2Q9Y2M2 353 aa11.4□□□□□ -0.58
RNU6-1208P-201ENST00000459588 PRR29P0C7W0 189 aa11.38□□□□□ -0.59
RNU6-1208P-201ENST00000459588 MKRN4PQ13434 485 aaPredicted RBP11.35□□□□□ -0.59
RNU6-1208P-201ENST00000459588 GABBR2O75899 941 aa11.34□□□□□ -0.59
RNU6-1208P-201ENST00000459588 PABPN1Q86U42 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
RNU6-1208P-201ENST00000459588 LHX8Q68G74 356 aa11.29□□□□□ -0.6
RNU6-1208P-201ENST00000459588 CHADLQ6NUI6 762 aa11.29□□□□□ -0.6
RNU6-1208P-201ENST00000459588 CLCN6P51797 869 aa11.22□□□□□ -0.61
RNU6-1208P-201ENST00000459588 CD44P16070 742 aaKnown RBP11.19□□□□□ -0.62
RNU6-1208P-201ENST00000459588 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
RNU6-1208P-201ENST00000459588 DCBLD2Q96PD2 775 aa11.11□□□□□ -0.63
RNU6-1208P-201ENST00000459588 STAG3Q9UJ98 1225 aa11.04□□□□□ -0.64
RNU6-1208P-201ENST00000459588 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
RNU6-1208P-201ENST00000459588 PAK3O75914 559 aaPredicted RBP10.98□□□□□ -0.65
RNU6-1208P-201ENST00000459588 EHMT2Q96KQ7 1210 aa10.98□□□□□ -0.65
RNU6-1208P-201ENST00000459588 POTEIP0CG38 1075 aa10.97□□□□□ -0.65
RNU6-1208P-201ENST00000459588 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
RNU6-1208P-201ENST00000459588 PLSCR2Q9NRY7 297 aa10.91□□□□□ -0.66
RNU6-1208P-201ENST00000459588 CSRNP3Q8WYN3 585 aa10.88□□□□□ -0.67
RNU6-1208P-201ENST00000459588 CREBZFQ9NS37 354 aa10.87□□□□□ -0.67
RNU6-1208P-201ENST00000459588 NPM1P06748 294 aaKnown RBP eCLIP10.86□□□□□ -0.67
RNU6-1208P-201ENST00000459588 SPDYE4A6NLX3 237 aa10.81□□□□□ -0.68
RNU6-1208P-201ENST00000459588 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
RNU6-1208P-201ENST00000459588 PHF12Q96QT6 1004 aa10.73□□□□□ -0.69
RNU6-1208P-201ENST00000459588 OTUD5Q96G74 571 aa10.7□□□□□ -0.7
RNU6-1208P-201ENST00000459588 MAMSTRQ6ZN01 415 aa10.65□□□□□ -0.7
RNU6-1208P-201ENST00000459588 POTEMA6NI47 508 aa10.64□□□□□ -0.71
RNU6-1208P-201ENST00000459588 C7P10643 843 aa10.64□□□□□ -0.71
RNU6-1208P-201ENST00000459588 SLC39A7Q92504 469 aa10.64□□□□□ -0.71
RNU6-1208P-201ENST00000459588 METRNQ9UJH8 293 aa10.62□□□□□ -0.71
RNU6-1208P-201ENST00000459588 POTEB2H3BUK9 544 aa10.61□□□□□ -0.71
RNU6-1208P-201ENST00000459588 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms