RNA–Protein interactions for RNA: ENST00000458646.1

RARB-204, Transcript of retinoic acid receptor beta, humanhuman

TSL 1 (best) BASIC

Gene RARB, Length 2,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-204ENST00000458646 NISCHQ9Y2I1 1504 aa13.41□□□□□ -0.26
RARB-204ENST00000458646 AEBP2Q6ZN18 517 aaPredicted RBP11.58□□□□□ -0.56
RARB-204ENST00000458646 SHROOM4Q9ULL8 1493 aa11.48□□□□□ -0.57
RARB-204ENST00000458646 ZCCHC6Q5VYS8 1495 aaKnown RBP11.42□□□□□ -0.58
RARB-204ENST00000458646 CHIC1Q5VXU3 224 aa11.38□□□□□ -0.59
RARB-204ENST00000458646 CCDC180Q9P1Z9 1646 aa11.37□□□□□ -0.59
RARB-204ENST00000458646 SUPT5HO00267 1087 aaKnown RBP11.28□□□□□ -0.6
RARB-204ENST00000458646 MYO15BQ96JP2 1530 aa11.24□□□□□ -0.61
RARB-204ENST00000458646 HRCP23327 699 aa11.09□□□□□ -0.63
RARB-204ENST00000458646 DCAF1Q9Y4B6 1507 aa11.02□□□□□ -0.64
RARB-204ENST00000458646 PCGF6Q9BYE7 350 aa10.9□□□□□ -0.66
RARB-204ENST00000458646 DCAF8L2P0C7V8 631 aa10.86□□□□□ -0.67
RARB-204ENST00000458646 ABCC9O60706 1549 aa10.84□□□□□ -0.67
RARB-204ENST00000458646 PPARGC1BQ86YN6 1023 aaKnown RBP10.82□□□□□ -0.68
RARB-204ENST00000458646 LOC105371045A0A1W2PR82 267 aa10.76□□□□□ -0.69
RARB-204ENST00000458646 RSF1Q96T23 1441 aaPredicted RBP10.66□□□□□ -0.7
RARB-204ENST00000458646 TRIM26Q12899 539 aaPredicted RBP10.66□□□□□ -0.7
RARB-204ENST00000458646 SCRIBQ14160 1630 aa10.65□□□□□ -0.7
RARB-204ENST00000458646 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.7
RARB-204ENST00000458646 TRIM41Q8WV44 630 aa10.49□□□□□ -0.73
RARB-204ENST00000458646 ZEB1P37275 1124 aaPredicted RBP10.47□□□□□ -0.73
RARB-204ENST00000458646 EIF4G1Q04637 1599 aaKnown RBP10.45□□□□□ -0.74
RARB-204ENST00000458646 CECR2Q9BXF3 1484 aa10.45□□□□□ -0.74
RARB-204ENST00000458646 MROH2BQ7Z745 1585 aa10.45□□□□□ -0.74
RARB-204ENST00000458646 WIZO95785 1651 aa10.41□□□□□ -0.74
RARB-204ENST00000458646 NACADO15069 1562 aa10.41□□□□□ -0.74
RARB-204ENST00000458646 FAM9AQ8IZU1 332 aaPredicted RBP10.41□□□□□ -0.74
RARB-204ENST00000458646 BAZ1AQ9NRL2 1556 aaPredicted RBP10.39□□□□□ -0.75
RARB-204ENST00000458646 SCAF1Q9H7N4 1312 aaKnown RBP10.34□□□□□ -0.75
RARB-204ENST00000458646 EHMT2Q96KQ7 1210 aa10.3□□□□□ -0.76
RARB-204ENST00000458646 PELP1Q8IZL8 1130 aaKnown RBP10.26□□□□□ -0.77
RARB-204ENST00000458646 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
RARB-204ENST00000458646 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.771e-7■■■■■ 66.8
RARB-204ENST00000458646 ABCC8Q09428 1581 aa10.23□□□□□ -0.77
RARB-204ENST00000458646 CCDC88BA6NC98 1476 aa10.21□□□□□ -0.77
RARB-204ENST00000458646 SMARCA2P51531 1590 aa10.21□□□□□ -0.78
RARB-204ENST00000458646 SMARCA4P51532 1647 aa10.21□□□□□ -0.78
RARB-204ENST00000458646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.21□□□□□ -0.78
RARB-204ENST00000458646 CEP162Q5TB80 1403 aa10.18□□□□□ -0.78
RARB-204ENST00000458646 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
RARB-204ENST00000458646 CCER1Q8TC90 406 aaPredicted RBP10.16□□□□□ -0.78
RARB-204ENST00000458646 ACIN1Q9UKV3 1341 aaKnown RBP10.14□□□□□ -0.79
RARB-204ENST00000458646 SOGA1O94964 1423 aa10.14□□□□□ -0.79
RARB-204ENST00000458646 NEUROD1Q13562 356 aa10.13□□□□□ -0.79
RARB-204ENST00000458646 TNIKQ9UKE5 1360 aa10.12□□□□□ -0.79
RARB-204ENST00000458646 EEA1Q15075 1411 aa10.1□□□□□ -0.79
RARB-204ENST00000458646 RUSC2Q8N2Y8 1516 aa10.09□□□□□ -0.79
RARB-204ENST00000458646 PHF23Q9BUL5 403 aaPredicted RBP10.09□□□□□ -0.79
RARB-204ENST00000458646 DIEXFQ68CQ4 756 aaKnown RBP10.08□□□□□ -0.8
RARB-204ENST00000458646 GOLGA3Q08378 1498 aa10.05□□□□□ -0.8
RARB-204ENST00000458646 TTBK1Q5TCY1 1321 aaPredicted RBP10.04□□□□□ -0.8
RARB-204ENST00000458646 KIF21BO75037 1637 aa10.03□□□□□ -0.8
RARB-204ENST00000458646 PEG3Q9GZU2 1588 aa10.02□□□□□ -0.81
RARB-204ENST00000458646 SYNJ1O43426 1573 aa10.01□□□□□ -0.81
RARB-204ENST00000458646 GTF3C3Q9Y5Q9 886 aa10.01□□□□□ -0.81
RARB-204ENST00000458646 CSRNP3Q8WYN3 585 aa10.01□□□□□ -0.81
RARB-204ENST00000458646 CENPBP07199 599 aaPredicted RBP10□□□□□ -0.81
RARB-204ENST00000458646 BICRAQ9NZM4 1560 aa9.98□□□□□ -0.81
RARB-204ENST00000458646 CEP164Q9UPV0 1460 aa9.98□□□□□ -0.81
RARB-204ENST00000458646 ZNF316A6NFI3 1004 aaPredicted RBP9.96□□□□□ -0.82
RARB-204ENST00000458646 UBTFP17480 764 aaKnown RBP9.95□□□□□ -0.82
RARB-204ENST00000458646 VPS8Q8N3P4 1428 aa9.93□□□□□ -0.82
RARB-204ENST00000458646 BAZ1BQ9UIG0 1483 aaKnown RBP9.93□□□□□ -0.82
RARB-204ENST00000458646 CLIP1P30622 1438 aa9.93□□□□□ -0.82
RARB-204ENST00000458646 RAPGEF2Q9Y4G8 1499 aa9.9□□□□□ -0.83
RARB-204ENST00000458646 TOP2BQ02880 1626 aa9.86□□□□□ -0.83
RARB-204ENST00000458646 MIER1Q8N108 512 aa9.86□□□□□ -0.83
RARB-204ENST00000458646 ATAD2BQ9ULI0 1458 aa9.86□□□□□ -0.83
RARB-204ENST00000458646 HNRNPUL2Q1KMD3 747 aaKnown RBP9.85□□□□□ -0.83
RARB-204ENST00000458646 BIVM-ERCC5R4GMW8 1640 aa9.84□□□□□ -0.83
RARB-204ENST00000458646 YTHDC1Q96MU7 727 aaKnown RBP9.84□□□□□ -0.83
RARB-204ENST00000458646 PABPN1Q86U42 306 aaKnown RBP eCLIP9.82□□□□□ -0.84
RARB-204ENST00000458646 ERICH3Q5RHP9 1530 aa9.82□□□□□ -0.84
RARB-204ENST00000458646 ARAP1Q96P48 1450 aa9.81□□□□□ -0.84
RARB-204ENST00000458646 PRXQ9BXM0 1461 aa9.79□□□□□ -0.84
RARB-204ENST00000458646 DHX57Q6P158 1386 aaKnown RBP9.78□□□□□ -0.84
RARB-204ENST00000458646 MYT1Q01538 1121 aa9.76□□□□□ -0.85
RARB-204ENST00000458646 CLSPNQ9HAW4 1339 aa9.76□□□□□ -0.85
RARB-204ENST00000458646 CUX2O14529 1486 aa9.75□□□□□ -0.85
RARB-204ENST00000458646 RRBP1Q9P2E9 1410 aaKnown RBP9.74□□□□□ -0.85
RARB-204ENST00000458646 APLP2Q06481 763 aa9.72□□□□□ -0.85
RARB-204ENST00000458646 CUX1P39880 1505 aa9.72□□□□□ -0.85
RARB-204ENST00000458646 SENP3Q9H4L4 574 aaPredicted RBP9.71□□□□□ -0.86
RARB-204ENST00000458646 RANGAP1P46060 587 aaPredicted RBP9.69□□□□□ -0.86
RARB-204ENST00000458646 KANK4Q5T7N3 995 aaPredicted RBP9.69□□□□□ -0.86
RARB-204ENST00000458646 HMGXB3Q12766 1538 aa9.69□□□□□ -0.86
RARB-204ENST00000458646 ARHGAP35Q9NRY4 1499 aa9.67□□□□□ -0.86
RARB-204ENST00000458646 MAPKBP1O60336 1514 aa9.66□□□□□ -0.86
RARB-204ENST00000458646 CCNB3Q8WWL7 1395 aa9.64□□□□□ -0.87
RARB-204ENST00000458646 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
RARB-204ENST00000458646 SUPT16HQ9Y5B9 1047 aaKnown RBP9.64□□□□□ -0.87
RARB-204ENST00000458646 PRDM2Q13029 1718 aa9.63□□□□□ -0.87
RARB-204ENST00000458646 TIAM1Q13009 1591 aa9.62□□□□□ -0.87
RARB-204ENST00000458646 NCAPD3P42695 1498 aa9.62□□□□□ -0.87
RARB-204ENST00000458646 CFTRP13569 1480 aa9.61□□□□□ -0.87
RARB-204ENST00000458646 MAP3K1Q13233 1512 aa9.6□□□□□ -0.87
RARB-204ENST00000458646 CFAP43Q8NDM7 1665 aa9.59□□□□□ -0.87
RARB-204ENST00000458646 RAB3GAP2Q9H2M9 1393 aa9.58□□□□□ -0.88
RARB-204ENST00000458646 WDR97A6NE52 1622 aa9.55□□□□□ -0.88
RARB-204ENST00000458646 LRRC9Q6ZRR7 1453 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms