RNA–Protein interactions for RNA: ENST00000458511.6

TRAPPC2-204, Transcript of trafficking protein particle complex 2, humanhuman

TSL 5 BASIC

Gene TRAPPC2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-204ENST00000458511 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
TRAPPC2-204ENST00000458511 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
TRAPPC2-204ENST00000458511 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC2-204ENST00000458511 PHF23Q9BUL5 403 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC2-204ENST00000458511 FOXD1Q16676 465 aa16.89■□□□□ 0.29
TRAPPC2-204ENST00000458511 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
TRAPPC2-204ENST00000458511 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
TRAPPC2-204ENST00000458511 MSH5O43196 834 aa15.71■□□□□ 0.11
TRAPPC2-204ENST00000458511 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
TRAPPC2-204ENST00000458511 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC2-204ENST00000458511 ADRA2BP18089 450 aa15.64■□□□□ 0.09
TRAPPC2-204ENST00000458511 MAPK8IP2Q13387 824 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC2-204ENST00000458511 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
TRAPPC2-204ENST00000458511 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
TRAPPC2-204ENST00000458511 PPP4R3CPQ6ZMV5 832 aa13.8□□□□□ -0.2
TRAPPC2-204ENST00000458511 DCAF8L1A6NGE4 600 aa13.72□□□□□ -0.21
TRAPPC2-204ENST00000458511 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC2-204ENST00000458511 HOXD11P31277 338 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC2-204ENST00000458511 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
TRAPPC2-204ENST00000458511 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
TRAPPC2-204ENST00000458511 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC2-204ENST00000458511 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
TRAPPC2-204ENST00000458511 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
TRAPPC2-204ENST00000458511 NPM3O75607 178 aaKnown RBP13.05□□□□□ -0.32
TRAPPC2-204ENST00000458511 DNAJC5BQ9UF47 199 aa13.04□□□□□ -0.32
TRAPPC2-204ENST00000458511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAPPC2-204ENST00000458511 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC2-204ENST00000458511 SPINK5Q9NQ38 1064 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC2-204ENST00000458511 KCNA4P22459 653 aa12.66□□□□□ -0.38
TRAPPC2-204ENST00000458511 CAPN15O75808 1086 aa12.58□□□□□ -0.4
TRAPPC2-204ENST00000458511 DSG3P32926 999 aa12.58□□□□□ -0.4
TRAPPC2-204ENST00000458511 SLC4A2P04920 1241 aa12.56□□□□□ -0.4
TRAPPC2-204ENST00000458511 POTEHQ6S545 545 aa12.46□□□□□ -0.41
TRAPPC2-204ENST00000458511 ABCB7O75027 752 aa12.37□□□□□ -0.43
TRAPPC2-204ENST00000458511 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC2-204ENST00000458511 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC2-204ENST00000458511 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
TRAPPC2-204ENST00000458511 APLP2Q06481 763 aa12.1□□□□□ -0.47
TRAPPC2-204ENST00000458511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC2-204ENST00000458511 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
TRAPPC2-204ENST00000458511 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC2-204ENST00000458511 NISCHQ9Y2I1 1504 aa11.99□□□□□ -0.49
TRAPPC2-204ENST00000458511 POLA2Q14181 598 aa11.98□□□□□ -0.49
TRAPPC2-204ENST00000458511 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC2-204ENST00000458511 ATF5Q9Y2D1 282 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC2-204ENST00000458511 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
TRAPPC2-204ENST00000458511 SLC4A1APQ9BWU0 796 aaKnown RBP11.82□□□□□ -0.52
TRAPPC2-204ENST00000458511 CHRDL2Q6WN34 429 aa11.8□□□□□ -0.52
TRAPPC2-204ENST00000458511 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
TRAPPC2-204ENST00000458511 ZBTB22O15209 634 aa11.71□□□□□ -0.53
TRAPPC2-204ENST00000458511 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
TRAPPC2-204ENST00000458511 AKT1S1Q96B36 256 aa11.59□□□□□ -0.55
TRAPPC2-204ENST00000458511 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
TRAPPC2-204ENST00000458511 REM2Q8IYK8 340 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC2-204ENST00000458511 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
TRAPPC2-204ENST00000458511 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC2-204ENST00000458511 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
TRAPPC2-204ENST00000458511 SP7Q8TDD2 431 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC2-204ENST00000458511 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRAPPC2-204ENST00000458511 HAX1O00165 279 aa11.33□□□□□ -0.6
TRAPPC2-204ENST00000458511 ATXN8OSP0DMR3 200 aa11.33□□□□□ -0.6
TRAPPC2-204ENST00000458511 EVX2Q03828 476 aa11.33□□□□□ -0.6
TRAPPC2-204ENST00000458511 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC2-204ENST00000458511 SLC24A1O60721 1099 aa11.27□□□□□ -0.61
TRAPPC2-204ENST00000458511 SPDYE2BA6NHP3 402 aa11.23□□□□□ -0.61
TRAPPC2-204ENST00000458511 SPDYE6P0CI01 402 aa11.23□□□□□ -0.61
TRAPPC2-204ENST00000458511 SPDYE2Q495Y8 402 aa11.23□□□□□ -0.61
TRAPPC2-204ENST00000458511 FBLN2P98095 1184 aa11.22□□□□□ -0.61
TRAPPC2-204ENST00000458511 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
TRAPPC2-204ENST00000458511 PRKAR2AP13861 404 aaKnown RBP11.15□□□□□ -0.62
TRAPPC2-204ENST00000458511 ZNF692Q9BU19 519 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC2-204ENST00000458511 SSUH2Q9Y2M2 353 aa11.12□□□□□ -0.63
TRAPPC2-204ENST00000458511 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC2-204ENST00000458511 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
TRAPPC2-204ENST00000458511 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
TRAPPC2-204ENST00000458511 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
TRAPPC2-204ENST00000458511 PABPN1Q86U42 306 aaKnown RBP eCLIP10.99□□□□□ -0.65
TRAPPC2-204ENST00000458511 GABBR2O75899 941 aa10.94□□□□□ -0.66
TRAPPC2-204ENST00000458511 AMER1Q5JTC6 1135 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC2-204ENST00000458511 PRR29P0C7W0 189 aa10.9□□□□□ -0.66
TRAPPC2-204ENST00000458511 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
TRAPPC2-204ENST00000458511 FARP1Q9Y4F1 1045 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC2-204ENST00000458511 CD44P16070 742 aaKnown RBP10.76□□□□□ -0.69
TRAPPC2-204ENST00000458511 LHX8Q68G74 356 aa10.75□□□□□ -0.69
TRAPPC2-204ENST00000458511 PLSCR2Q9NRY7 297 aa10.73□□□□□ -0.69
TRAPPC2-204ENST00000458511 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
TRAPPC2-204ENST00000458511 CCDC180Q9P1Z9 1646 aa10.59□□□□□ -0.71
TRAPPC2-204ENST00000458511 ZRANB1Q9UGI0 708 aa10.59□□□□□ -0.71
TRAPPC2-204ENST00000458511 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
TRAPPC2-204ENST00000458511 ZNF579Q8NAF0 562 aaKnown RBP10.56□□□□□ -0.72
TRAPPC2-204ENST00000458511 GALR2O43603 387 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC2-204ENST00000458511 DCBLD2Q96PD2 775 aa10.52□□□□□ -0.73
TRAPPC2-204ENST00000458511 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
TRAPPC2-204ENST00000458511 MNX1P50219 401 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC2-204ENST00000458511 STAG3Q9UJ98 1225 aa10.48□□□□□ -0.73
TRAPPC2-204ENST00000458511 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
TRAPPC2-204ENST00000458511 FKBP8Q14318 412 aa10.44□□□□□ -0.74
TRAPPC2-204ENST00000458511 CLCN6P51797 869 aa10.43□□□□□ -0.74
TRAPPC2-204ENST00000458511 PELP1Q8IZL8 1130 aaKnown RBP10.42□□□□□ -0.74
TRAPPC2-204ENST00000458511 OTUD5Q96G74 571 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms