RNA–Protein interactions for RNA: ENST00000457805.6

PTP4A2-201, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2 BASIC

Gene PTP4A2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-201ENST00000457805 AEBP2Q6ZN18 517 aaPredicted RBP35.29■■■■□ 3.24
PTP4A2-201ENST00000457805 CHIC1Q5VXU3 224 aa32.9■■■□□ 2.86
PTP4A2-201ENST00000457805 SENP3Q9H4L4 574 aaPredicted RBP30.14■■■□□ 2.42
PTP4A2-201ENST00000457805 PHF23Q9BUL5 403 aaPredicted RBP29.68■■■□□ 2.34
PTP4A2-201ENST00000457805 FOXD1Q16676 465 aa28.2■■■□□ 2.1
PTP4A2-201ENST00000457805 POTEDQ86YR6 584 aa27.03■■□□□ 1.92
PTP4A2-201ENST00000457805 MSH5O43196 834 aa26.59■■□□□ 1.85
PTP4A2-201ENST00000457805 PIAS4Q8N2W9 510 aaPredicted RBP26.17■■□□□ 1.78
PTP4A2-201ENST00000457805 PLPPR3Q6T4P5 718 aa25.96■■□□□ 1.75
PTP4A2-201ENST00000457805 PPP6R1Q9UPN7 881 aa25.92■■□□□ 1.74
PTP4A2-201ENST00000457805 ADRA2BP18089 450 aa25.77■■□□□ 1.72
PTP4A2-201ENST00000457805 MAPK8IP2Q13387 824 aaPredicted RBP23.87■■□□□ 1.41
PTP4A2-201ENST00000457805 DMRT2Q9Y5R5 561 aa23.83■■□□□ 1.41
PTP4A2-201ENST00000457805 SCAF1Q9H7N4 1312 aaKnown RBP23.52■■□□□ 1.36
PTP4A2-201ENST00000457805 CACNB1Q02641 598 aaPredicted RBP23.18■■□□□ 1.3
PTP4A2-201ENST00000457805 DCAF8L1A6NGE4 600 aa22.83■■□□□ 1.25
PTP4A2-201ENST00000457805 HOXD11P31277 338 aaPredicted RBP22.71■■□□□ 1.23
PTP4A2-201ENST00000457805 PPP4R3CPQ6ZMV5 832 aa22.7■■□□□ 1.22
PTP4A2-201ENST00000457805 RNF39Q9H2S5 420 aa22.66■■□□□ 1.22
PTP4A2-201ENST00000457805 CNKSR2Q8WXI2 1034 aa22.4■■□□□ 1.18
PTP4A2-201ENST00000457805 RNF216Q9NWF9 866 aaPredicted RBP22.36■■□□□ 1.17
PTP4A2-201ENST00000457805 C1QBPQ07021 282 aaKnown RBP22.27■■□□□ 1.16
PTP4A2-201ENST00000457805 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
PTP4A2-201ENST00000457805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.6■■□□□ 1.05
PTP4A2-201ENST00000457805 NCBP3Q53F19 620 aaKnown RBP21.59■■□□□ 1.05
PTP4A2-201ENST00000457805 NPM3O75607 178 aaKnown RBP21.34■■□□□ 1.01
PTP4A2-201ENST00000457805 U3KPZ7 1027 aaPredicted RBP21.13■□□□□ 0.97
PTP4A2-201ENST00000457805 POTEHQ6S545 545 aa21.04■□□□□ 0.96
PTP4A2-201ENST00000457805 DSG3P32926 999 aa21.01■□□□□ 0.95
PTP4A2-201ENST00000457805 SPINK5Q9NQ38 1064 aaPredicted RBP21■□□□□ 0.95
PTP4A2-201ENST00000457805 CAPN15O75808 1086 aa20.95■□□□□ 0.94
PTP4A2-201ENST00000457805 SLC4A2P04920 1241 aa20.56■□□□□ 0.88
PTP4A2-201ENST00000457805 TRHP20396 242 aaPredicted RBP20.48■□□□□ 0.87
PTP4A2-201ENST00000457805 ABCB7O75027 752 aa20.44■□□□□ 0.86
PTP4A2-201ENST00000457805 ZNF219Q9P2Y4 722 aaPredicted RBP20.4■□□□□ 0.86
PTP4A2-201ENST00000457805 KCNA4P22459 653 aa20.39■□□□□ 0.85
PTP4A2-201ENST00000457805 APLP2Q06481 763 aa20.39■□□□□ 0.85
PTP4A2-201ENST00000457805 NISCHQ9Y2I1 1504 aa20.32■□□□□ 0.84
PTP4A2-201ENST00000457805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.24■□□□□ 0.83
PTP4A2-201ENST00000457805 HNRNPUL2Q1KMD3 747 aaKnown RBP20.24■□□□□ 0.83
PTP4A2-201ENST00000457805 SAMD1Q6SPF0 538 aaPredicted RBP20.12■□□□□ 0.81
PTP4A2-201ENST00000457805 RBM42Q9BTD8 480 aaKnown RBP20.02■□□□□ 0.8
PTP4A2-201ENST00000457805 CHRDL2Q6WN34 429 aa19.85■□□□□ 0.77
PTP4A2-201ENST00000457805 POLA2Q14181 598 aa19.8■□□□□ 0.76
PTP4A2-201ENST00000457805 MYCNP04198 464 aaPredicted RBP19.72■□□□□ 0.75
PTP4A2-201ENST00000457805 AKT1S1Q96B36 256 aa19.45■□□□□ 0.7
PTP4A2-201ENST00000457805 SP7Q8TDD2 431 aaPredicted RBP19.44■□□□□ 0.7
PTP4A2-201ENST00000457805 ATF5Q9Y2D1 282 aaPredicted RBP19.37■□□□□ 0.69
PTP4A2-201ENST00000457805 ZBTB12Q9Y330 459 aaPredicted RBP19.31■□□□□ 0.68
PTP4A2-201ENST00000457805 REM2Q8IYK8 340 aaPredicted RBP19.28■□□□□ 0.68
PTP4A2-201ENST00000457805 PIP4P2Q8N4L2 257 aa19.27■□□□□ 0.68
PTP4A2-201ENST00000457805 OSCARQ8IYS5 282 aa19.2■□□□□ 0.66
PTP4A2-201ENST00000457805 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
PTP4A2-201ENST00000457805 PITPNM1O00562 1244 aa19.1■□□□□ 0.65
PTP4A2-201ENST00000457805 SLC4A1APQ9BWU0 796 aaKnown RBP19.09■□□□□ 0.65
PTP4A2-201ENST00000457805 FXR2P51116 673 aaKnown RBP eCLIP19.06■□□□□ 0.64
PTP4A2-201ENST00000457805 HAX1O00165 279 aa19.05■□□□□ 0.64
PTP4A2-201ENST00000457805 EVX2Q03828 476 aa18.83■□□□□ 0.6
PTP4A2-201ENST00000457805 ZBTB22O15209 634 aa18.77■□□□□ 0.6
PTP4A2-201ENST00000457805 SPDYE2BA6NHP3 402 aa18.69■□□□□ 0.58
PTP4A2-201ENST00000457805 SPDYE6P0CI01 402 aa18.69■□□□□ 0.58
PTP4A2-201ENST00000457805 SPDYE2Q495Y8 402 aa18.69■□□□□ 0.58
PTP4A2-201ENST00000457805 ATXN8OSP0DMR3 200 aa18.66■□□□□ 0.58
PTP4A2-201ENST00000457805 PRKAR2AP13861 404 aaKnown RBP18.58■□□□□ 0.56
PTP4A2-201ENST00000457805 FBLN2P98095 1184 aa18.58■□□□□ 0.56
PTP4A2-201ENST00000457805 SPDYE1Q8NFV5 336 aaPredicted RBP18.51■□□□□ 0.55
PTP4A2-201ENST00000457805 CLEC11AQ9Y240 323 aa18.5■□□□□ 0.55
PTP4A2-201ENST00000457805 C19orf67A6NJJ6 358 aa18.47■□□□□ 0.55
PTP4A2-201ENST00000457805 MKRN4PQ13434 485 aaPredicted RBP18.44■□□□□ 0.54
PTP4A2-201ENST00000457805 SSUH2Q9Y2M2 353 aa18.41■□□□□ 0.54
PTP4A2-201ENST00000457805 ZNF692Q9BU19 519 aaPredicted RBP18.36■□□□□ 0.53
PTP4A2-201ENST00000457805 GABBR2O75899 941 aa18.34■□□□□ 0.53
PTP4A2-201ENST00000457805 CHADLQ6NUI6 762 aa18.25■□□□□ 0.51
PTP4A2-201ENST00000457805 LHX8Q68G74 356 aa18.22■□□□□ 0.51
PTP4A2-201ENST00000457805 PRR29P0C7W0 189 aa18.11■□□□□ 0.49
PTP4A2-201ENST00000457805 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
PTP4A2-201ENST00000457805 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
PTP4A2-201ENST00000457805 POTEIP0CG38 1075 aa17.98■□□□□ 0.47
PTP4A2-201ENST00000457805 ABCC9O60706 1549 aa17.95■□□□□ 0.46
PTP4A2-201ENST00000457805 CD44P16070 742 aaKnown RBP17.95■□□□□ 0.46
PTP4A2-201ENST00000457805 FARP1Q9Y4F1 1045 aaPredicted RBP17.91■□□□□ 0.46
PTP4A2-201ENST00000457805 CLCN6P51797 869 aa17.79■□□□□ 0.44
PTP4A2-201ENST00000457805 DCBLD2Q96PD2 775 aa17.68■□□□□ 0.42
PTP4A2-201ENST00000457805 ZNF579Q8NAF0 562 aaKnown RBP17.66■□□□□ 0.42
PTP4A2-201ENST00000457805 ZRANB1Q9UGI0 708 aa17.6■□□□□ 0.41
PTP4A2-201ENST00000457805 CREBZFQ9NS37 354 aa17.56■□□□□ 0.4
PTP4A2-201ENST00000457805 PLSCR2Q9NRY7 297 aa17.54■□□□□ 0.4
PTP4A2-201ENST00000457805 GALR2O43603 387 aaPredicted RBP17.5■□□□□ 0.39
PTP4A2-201ENST00000457805 STAG3Q9UJ98 1225 aa17.43■□□□□ 0.38
PTP4A2-201ENST00000457805 OTUD5Q96G74 571 aa17.42■□□□□ 0.38
PTP4A2-201ENST00000457805 POTEB2H3BUK9 544 aa17.37■□□□□ 0.37
PTP4A2-201ENST00000457805 PHF12Q96QT6 1004 aa17.33■□□□□ 0.36
PTP4A2-201ENST00000457805 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
PTP4A2-201ENST00000457805 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
PTP4A2-201ENST00000457805 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
PTP4A2-201ENST00000457805 SPDYE4A6NLX3 237 aa17.22■□□□□ 0.35
PTP4A2-201ENST00000457805 MNX1P50219 401 aaPredicted RBP17.2■□□□□ 0.34
PTP4A2-201ENST00000457805 POTEMA6NI47 508 aa17.18■□□□□ 0.34
PTP4A2-201ENST00000457805 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
PTP4A2-201ENST00000457805 NPM1P06748 294 aaKnown RBP eCLIP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms