RNA–Protein interactions for RNA: ENST00000456658.1

CDC42P1-201, Transcript of cell division cycle 42 pseudogene 1, humanhuman

BASIC

Gene CDC42P1, Length 548 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P1-201ENST00000456658 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
CDC42P1-201ENST00000456658 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
CDC42P1-201ENST00000456658 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
CDC42P1-201ENST00000456658 PHF23Q9BUL5 403 aaPredicted RBP19.4■□□□□ 0.7
CDC42P1-201ENST00000456658 FOXD1Q16676 465 aa18.23■□□□□ 0.51
CDC42P1-201ENST00000456658 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
CDC42P1-201ENST00000456658 PPP6R1Q9UPN7 881 aa17.22■□□□□ 0.35
CDC42P1-201ENST00000456658 ADRA2BP18089 450 aa17.2■□□□□ 0.34
CDC42P1-201ENST00000456658 PIAS4Q8N2W9 510 aaPredicted RBP17.13■□□□□ 0.33
CDC42P1-201ENST00000456658 MSH5O43196 834 aa17.03■□□□□ 0.32
CDC42P1-201ENST00000456658 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
CDC42P1-201ENST00000456658 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
CDC42P1-201ENST00000456658 MAPK8IP2Q13387 824 aaPredicted RBP15.69■□□□□ 0.1
CDC42P1-201ENST00000456658 PPP4R3CPQ6ZMV5 832 aa15.66■□□□□ 0.1
CDC42P1-201ENST00000456658 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
CDC42P1-201ENST00000456658 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
CDC42P1-201ENST00000456658 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
CDC42P1-201ENST00000456658 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
CDC42P1-201ENST00000456658 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
CDC42P1-201ENST00000456658 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
CDC42P1-201ENST00000456658 NPM3O75607 178 aaKnown RBP14.91□□□□□ -0.02
CDC42P1-201ENST00000456658 KCNA4P22459 653 aa14.85□□□□□ -0.03
CDC42P1-201ENST00000456658 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
CDC42P1-201ENST00000456658 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
CDC42P1-201ENST00000456658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.1
CDC42P1-201ENST00000456658 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
CDC42P1-201ENST00000456658 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
CDC42P1-201ENST00000456658 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
CDC42P1-201ENST00000456658 U3KPZ7 1027 aaPredicted RBP14.14□□□□□ -0.15
CDC42P1-201ENST00000456658 SLC4A1APQ9BWU0 796 aaKnown RBP14.12□□□□□ -0.15
CDC42P1-201ENST00000456658 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
CDC42P1-201ENST00000456658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
CDC42P1-201ENST00000456658 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
CDC42P1-201ENST00000456658 APLP2Q06481 763 aa13.89□□□□□ -0.19
CDC42P1-201ENST00000456658 SAMD1Q6SPF0 538 aaPredicted RBP13.84□□□□□ -0.19
CDC42P1-201ENST00000456658 CAPN15O75808 1086 aa13.83□□□□□ -0.2
CDC42P1-201ENST00000456658 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
CDC42P1-201ENST00000456658 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
CDC42P1-201ENST00000456658 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
CDC42P1-201ENST00000456658 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
CDC42P1-201ENST00000456658 DSG3P32926 999 aa13.67□□□□□ -0.22
CDC42P1-201ENST00000456658 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
CDC42P1-201ENST00000456658 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
CDC42P1-201ENST00000456658 ZBTB22O15209 634 aa13.63□□□□□ -0.23
CDC42P1-201ENST00000456658 ABCB7O75027 752 aa13.5□□□□□ -0.25
CDC42P1-201ENST00000456658 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
CDC42P1-201ENST00000456658 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
CDC42P1-201ENST00000456658 POLA2Q14181 598 aa13.37□□□□□ -0.27
CDC42P1-201ENST00000456658 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
CDC42P1-201ENST00000456658 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
CDC42P1-201ENST00000456658 FBLN2P98095 1184 aa12.97□□□□□ -0.33
CDC42P1-201ENST00000456658 OSCARQ8IYS5 282 aa12.91□□□□□ -0.34
CDC42P1-201ENST00000456658 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
CDC42P1-201ENST00000456658 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
CDC42P1-201ENST00000456658 SPDYE2BA6NHP3 402 aa12.78□□□□□ -0.36
CDC42P1-201ENST00000456658 SPDYE6P0CI01 402 aa12.78□□□□□ -0.36
CDC42P1-201ENST00000456658 SPDYE2Q495Y8 402 aa12.78□□□□□ -0.36
CDC42P1-201ENST00000456658 REM2Q8IYK8 340 aaPredicted RBP12.69□□□□□ -0.38
CDC42P1-201ENST00000456658 POTEHQ6S545 545 aa12.67□□□□□ -0.38
CDC42P1-201ENST00000456658 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
CDC42P1-201ENST00000456658 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
CDC42P1-201ENST00000456658 SSUH2Q9Y2M2 353 aa12.61□□□□□ -0.39
CDC42P1-201ENST00000456658 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
CDC42P1-201ENST00000456658 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
CDC42P1-201ENST00000456658 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
CDC42P1-201ENST00000456658 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
CDC42P1-201ENST00000456658 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
CDC42P1-201ENST00000456658 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
CDC42P1-201ENST00000456658 FXR2P51116 673 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDC42P1-201ENST00000456658 FKBP8Q14318 412 aa12.35□□□□□ -0.43
CDC42P1-201ENST00000456658 PRR29P0C7W0 189 aa12.27□□□□□ -0.45
CDC42P1-201ENST00000456658 STAG3Q9UJ98 1225 aa12.24□□□□□ -0.45
CDC42P1-201ENST00000456658 PRKAR2AP13861 404 aaKnown RBP12.23□□□□□ -0.45
CDC42P1-201ENST00000456658 PROM2Q8N271 834 aa12.14□□□□□ -0.47
CDC42P1-201ENST00000456658 HAX1O00165 279 aa12.12□□□□□ -0.47
CDC42P1-201ENST00000456658 CHADLQ6NUI6 762 aa12.1□□□□□ -0.47
CDC42P1-201ENST00000456658 SP7Q8TDD2 431 aaPredicted RBP12.02□□□□□ -0.49
CDC42P1-201ENST00000456658 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
CDC42P1-201ENST00000456658 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
CDC42P1-201ENST00000456658 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
CDC42P1-201ENST00000456658 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
CDC42P1-201ENST00000456658 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
CDC42P1-201ENST00000456658 EVX2Q03828 476 aa11.92□□□□□ -0.5
CDC42P1-201ENST00000456658 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
CDC42P1-201ENST00000456658 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDC42P1-201ENST00000456658 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
CDC42P1-201ENST00000456658 MNX1P50219 401 aaPredicted RBP11.82□□□□□ -0.52
CDC42P1-201ENST00000456658 MIER1Q8N108 512 aa11.81□□□□□ -0.52
CDC42P1-201ENST00000456658 FBXO3Q9UK99 471 aa11.8□□□□□ -0.52
CDC42P1-201ENST00000456658 PAK3O75914 559 aaPredicted RBP11.77□□□□□ -0.53
CDC42P1-201ENST00000456658 PLCD3Q8N3E9 789 aa11.76□□□□□ -0.53
CDC42P1-201ENST00000456658 CLCN6P51797 869 aa11.75□□□□□ -0.53
CDC42P1-201ENST00000456658 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
CDC42P1-201ENST00000456658 GABBR2O75899 941 aa11.72□□□□□ -0.53
CDC42P1-201ENST00000456658 ZBTB47Q9UFB7 747 aaPredicted RBP11.72□□□□□ -0.53
CDC42P1-201ENST00000456658 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
CDC42P1-201ENST00000456658 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
CDC42P1-201ENST00000456658 TSPYL2Q9H2G4 693 aaPredicted RBP11.58□□□□□ -0.56
CDC42P1-201ENST00000456658 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
CDC42P1-201ENST00000456658 PHF12Q96QT6 1004 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms