RNA–Protein interactions for RNA: ENST00000455677.1

RAD50-206, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 5

Gene RAD50, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-206ENST00000455677 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
RAD50-206ENST00000455677 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
RAD50-206ENST00000455677 SENP3Q9H4L4 574 aaPredicted RBP21.91■■□□□ 1.1
RAD50-206ENST00000455677 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
RAD50-206ENST00000455677 FOXD1Q16676 465 aa20.57■□□□□ 0.88
RAD50-206ENST00000455677 POTEDQ86YR6 584 aa19.43■□□□□ 0.7
RAD50-206ENST00000455677 MSH5O43196 834 aa19.24■□□□□ 0.67
RAD50-206ENST00000455677 PIAS4Q8N2W9 510 aaPredicted RBP19.08■□□□□ 0.64
RAD50-206ENST00000455677 PLPPR3Q6T4P5 718 aa19.06■□□□□ 0.64
RAD50-206ENST00000455677 PPP6R1Q9UPN7 881 aa19.06■□□□□ 0.64
RAD50-206ENST00000455677 ADRA2BP18089 450 aa18.94■□□□□ 0.62
RAD50-206ENST00000455677 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
RAD50-206ENST00000455677 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
RAD50-206ENST00000455677 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
RAD50-206ENST00000455677 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
RAD50-206ENST00000455677 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
RAD50-206ENST00000455677 PPP4R3CPQ6ZMV5 832 aa16.73■□□□□ 0.27
RAD50-206ENST00000455677 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
RAD50-206ENST00000455677 HOXD11P31277 338 aaPredicted RBP16.6■□□□□ 0.25
RAD50-206ENST00000455677 RNF39Q9H2S5 420 aa16.46■□□□□ 0.23
RAD50-206ENST00000455677 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
RAD50-206ENST00000455677 RNF216Q9NWF9 866 aaPredicted RBP16.37■□□□□ 0.21
RAD50-206ENST00000455677 C1QBPQ07021 282 aaKnown RBP16.15■□□□□ 0.18
RAD50-206ENST00000455677 DNAJC5BQ9UF47 199 aa16.01■□□□□ 0.15
RAD50-206ENST00000455677 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
RAD50-206ENST00000455677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■■■■□ 22
RAD50-206ENST00000455677 NPM3O75607 178 aaKnown RBP15.78■□□□□ 0.12
RAD50-206ENST00000455677 U3KPZ7 1027 aaPredicted RBP15.48■□□□□ 0.07
RAD50-206ENST00000455677 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
RAD50-206ENST00000455677 DSG3P32926 999 aa15.32■□□□□ 0.04
RAD50-206ENST00000455677 CAPN15O75808 1086 aa15.3■□□□□ 0.04
RAD50-206ENST00000455677 KCNA4P22459 653 aa15.22■□□□□ 0.03
RAD50-206ENST00000455677 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
RAD50-206ENST00000455677 POTEHQ6S545 545 aa15.14■□□□□ 0.01
RAD50-206ENST00000455677 CCDC180Q9P1Z9 1646 aa15.08■□□□□ 0
RAD50-206ENST00000455677 ABCC9O60706 1549 aa15.06■□□□□ 0
RAD50-206ENST00000455677 TRHP20396 242 aaPredicted RBP15.01□□□□□ -0.01
RAD50-206ENST00000455677 ABCB7O75027 752 aa14.98□□□□□ -0.01
RAD50-206ENST00000455677 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
RAD50-206ENST00000455677 APLP2Q06481 763 aa14.83□□□□□ -0.04
RAD50-206ENST00000455677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.79□□□□□ -0.04
RAD50-206ENST00000455677 HNRNPUL2Q1KMD3 747 aaKnown RBP14.79□□□□□ -0.04
RAD50-206ENST00000455677 SAMD1Q6SPF0 538 aaPredicted RBP14.73□□□□□ -0.05
RAD50-206ENST00000455677 POLA2Q14181 598 aa14.54□□□□□ -0.08
RAD50-206ENST00000455677 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.09
RAD50-206ENST00000455677 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
RAD50-206ENST00000455677 CHRDL2Q6WN34 429 aa14.4□□□□□ -0.1
RAD50-206ENST00000455677 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
RAD50-206ENST00000455677 RB1CC1Q8TDY2 1594 aa14.31□□□□□ -0.12
RAD50-206ENST00000455677 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
RAD50-206ENST00000455677 NACADO15069 1562 aa14.24□□□□□ -0.13
RAD50-206ENST00000455677 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
RAD50-206ENST00000455677 AKT1S1Q96B36 256 aa14.16□□□□□ -0.14
RAD50-206ENST00000455677 DCAF8L2P0C7V8 631 aa14.15□□□□□ -0.14
RAD50-206ENST00000455677 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
RAD50-206ENST00000455677 REM2Q8IYK8 340 aaPredicted RBP14.09□□□□□ -0.15
RAD50-206ENST00000455677 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
RAD50-206ENST00000455677 MYO15BQ96JP2 1530 aa14.07□□□□□ -0.16
RAD50-206ENST00000455677 ZBTB22O15209 634 aa14.04□□□□□ -0.16
RAD50-206ENST00000455677 UNC13AQ9UPW8 1703 aa14.04□□□□□ -0.16
RAD50-206ENST00000455677 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
RAD50-206ENST00000455677 ZCCHC6Q5VYS8 1495 aaKnown RBP14.02□□□□□ -0.16
RAD50-206ENST00000455677 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
RAD50-206ENST00000455677 SP7Q8TDD2 431 aaPredicted RBP14.02□□□□□ -0.17
RAD50-206ENST00000455677 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.18
RAD50-206ENST00000455677 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
RAD50-206ENST00000455677 DCAF1Q9Y4B6 1507 aa13.92□□□□□ -0.18
RAD50-206ENST00000455677 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.191e-9■■■■□ 21.3
RAD50-206ENST00000455677 HAX1O00165 279 aa13.83□□□□□ -0.2
RAD50-206ENST00000455677 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
RAD50-206ENST00000455677 ATXN8OSP0DMR3 200 aa13.77□□□□□ -0.21
RAD50-206ENST00000455677 EVX2Q03828 476 aa13.76□□□□□ -0.21
RAD50-206ENST00000455677 SHROOM4Q9ULL8 1493 aa13.72□□□□□ -0.21
RAD50-206ENST00000455677 SPDYE2BA6NHP3 402 aa13.68□□□□□ -0.22
RAD50-206ENST00000455677 SPDYE6P0CI01 402 aa13.68□□□□□ -0.22
RAD50-206ENST00000455677 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
RAD50-206ENST00000455677 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
RAD50-206ENST00000455677 FBLN2P98095 1184 aa13.65□□□□□ -0.22
RAD50-206ENST00000455677 CC2D2AQ9P2K1 1620 aa13.6□□□□□ -0.23
RAD50-206ENST00000455677 EIF4G1Q04637 1599 aaKnown RBP13.59□□□□□ -0.23
RAD50-206ENST00000455677 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
RAD50-206ENST00000455677 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
RAD50-206ENST00000455677 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
RAD50-206ENST00000455677 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
RAD50-206ENST00000455677 SSUH2Q9Y2M2 353 aa13.52□□□□□ -0.25
RAD50-206ENST00000455677 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
RAD50-206ENST00000455677 C19orf67A6NJJ6 358 aa13.44□□□□□ -0.26
RAD50-206ENST00000455677 CHADLQ6NUI6 762 aa13.4□□□□□ -0.26
RAD50-206ENST00000455677 GABBR2O75899 941 aa13.34□□□□□ -0.27
RAD50-206ENST00000455677 PRR29P0C7W0 189 aa13.27□□□□□ -0.29
RAD50-206ENST00000455677 LHX8Q68G74 356 aa13.17□□□□□ -0.3
RAD50-206ENST00000455677 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
RAD50-206ENST00000455677 SMARCA4P51532 1647 aa13.15□□□□□ -0.3
RAD50-206ENST00000455677 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
RAD50-206ENST00000455677 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
RAD50-206ENST00000455677 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
RAD50-206ENST00000455677 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
RAD50-206ENST00000455677 SMARCA2P51531 1590 aa13.08□□□□□ -0.32
RAD50-206ENST00000455677 HMGXB3Q12766 1538 aa13.08□□□□□ -0.32
RAD50-206ENST00000455677 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms