RNA–Protein interactions for RNA: ENST00000455595.1

DHFRP3-201, Transcript of dihydrofolate reductase pseudogene 3, humanhuman

BASIC

Gene DHFRP3, Length 559 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP3-201ENST00000455595 AEBP2Q6ZN18 517 aaPredicted RBP23.18■■□□□ 1.3
DHFRP3-201ENST00000455595 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
DHFRP3-201ENST00000455595 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
DHFRP3-201ENST00000455595 PHF23Q9BUL5 403 aaPredicted RBP19.53■□□□□ 0.72
DHFRP3-201ENST00000455595 FOXD1Q16676 465 aa18.56■□□□□ 0.56
DHFRP3-201ENST00000455595 POTEDQ86YR6 584 aa17.98■□□□□ 0.47
DHFRP3-201ENST00000455595 MSH5O43196 834 aa17.6■□□□□ 0.41
DHFRP3-201ENST00000455595 PIAS4Q8N2W9 510 aaPredicted RBP17.24■□□□□ 0.35
DHFRP3-201ENST00000455595 PLPPR3Q6T4P5 718 aa17.01■□□□□ 0.31
DHFRP3-201ENST00000455595 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
DHFRP3-201ENST00000455595 ADRA2BP18089 450 aa16.88■□□□□ 0.29
DHFRP3-201ENST00000455595 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
DHFRP3-201ENST00000455595 MAPK8IP2Q13387 824 aaPredicted RBP15.64■□□□□ 0.09
DHFRP3-201ENST00000455595 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
DHFRP3-201ENST00000455595 CACNB1Q02641 598 aaPredicted RBP15.38■□□□□ 0.05
DHFRP3-201ENST00000455595 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
DHFRP3-201ENST00000455595 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
DHFRP3-201ENST00000455595 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
DHFRP3-201ENST00000455595 PPP4R3CPQ6ZMV5 832 aa14.83□□□□□ -0.04
DHFRP3-201ENST00000455595 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
DHFRP3-201ENST00000455595 CNKSR2Q8WXI2 1034 aa14.68□□□□□ -0.06
DHFRP3-201ENST00000455595 RNF216Q9NWF9 866 aaPredicted RBP14.68□□□□□ -0.06
DHFRP3-201ENST00000455595 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
DHFRP3-201ENST00000455595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.2□□□□□ -0.14
DHFRP3-201ENST00000455595 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
DHFRP3-201ENST00000455595 POTEHQ6S545 545 aa14.01□□□□□ -0.17
DHFRP3-201ENST00000455595 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
DHFRP3-201ENST00000455595 U3KPZ7 1027 aaPredicted RBP13.85□□□□□ -0.19
DHFRP3-201ENST00000455595 DSG3P32926 999 aa13.84□□□□□ -0.19
DHFRP3-201ENST00000455595 CAPN15O75808 1086 aa13.79□□□□□ -0.2
DHFRP3-201ENST00000455595 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
DHFRP3-201ENST00000455595 TRHP20396 242 aaPredicted RBP13.45□□□□□ -0.26
DHFRP3-201ENST00000455595 APLP2Q06481 763 aa13.45□□□□□ -0.26
DHFRP3-201ENST00000455595 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
DHFRP3-201ENST00000455595 ABCB7O75027 752 aa13.41□□□□□ -0.26
DHFRP3-201ENST00000455595 SLC4A2P04920 1241 aa13.4□□□□□ -0.26
DHFRP3-201ENST00000455595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
DHFRP3-201ENST00000455595 HNRNPUL2Q1KMD3 747 aaKnown RBP13.31□□□□□ -0.28
DHFRP3-201ENST00000455595 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
DHFRP3-201ENST00000455595 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
DHFRP3-201ENST00000455595 KCNA4P22459 653 aa13.19□□□□□ -0.3
DHFRP3-201ENST00000455595 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
DHFRP3-201ENST00000455595 POLA2Q14181 598 aa12.97□□□□□ -0.33
DHFRP3-201ENST00000455595 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
DHFRP3-201ENST00000455595 MYCNP04198 464 aaPredicted RBP12.89□□□□□ -0.35
DHFRP3-201ENST00000455595 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
DHFRP3-201ENST00000455595 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
DHFRP3-201ENST00000455595 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
DHFRP3-201ENST00000455595 REM2Q8IYK8 340 aaPredicted RBP12.69□□□□□ -0.38
DHFRP3-201ENST00000455595 HAX1O00165 279 aa12.6□□□□□ -0.39
DHFRP3-201ENST00000455595 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
DHFRP3-201ENST00000455595 OSCARQ8IYS5 282 aa12.58□□□□□ -0.4
DHFRP3-201ENST00000455595 PITPNM1O00562 1244 aa12.56□□□□□ -0.4
DHFRP3-201ENST00000455595 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.4
DHFRP3-201ENST00000455595 FOXD4L1Q9NU39 408 aa12.49□□□□□ -0.41
DHFRP3-201ENST00000455595 EVX2Q03828 476 aa12.38□□□□□ -0.43
DHFRP3-201ENST00000455595 SLC4A1APQ9BWU0 796 aaKnown RBP12.36□□□□□ -0.43
DHFRP3-201ENST00000455595 SPDYE2BA6NHP3 402 aa12.27□□□□□ -0.45
DHFRP3-201ENST00000455595 SPDYE6P0CI01 402 aa12.27□□□□□ -0.45
DHFRP3-201ENST00000455595 SPDYE2Q495Y8 402 aa12.27□□□□□ -0.45
DHFRP3-201ENST00000455595 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
DHFRP3-201ENST00000455595 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
DHFRP3-201ENST00000455595 FBLN2P98095 1184 aa12.18□□□□□ -0.46
DHFRP3-201ENST00000455595 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
DHFRP3-201ENST00000455595 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
DHFRP3-201ENST00000455595 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
DHFRP3-201ENST00000455595 ZBTB22O15209 634 aa12.1□□□□□ -0.47
DHFRP3-201ENST00000455595 GABBR2O75899 941 aa12.1□□□□□ -0.47
DHFRP3-201ENST00000455595 LHX8Q68G74 356 aa12.09□□□□□ -0.47
DHFRP3-201ENST00000455595 SSUH2Q9Y2M2 353 aa12.05□□□□□ -0.48
DHFRP3-201ENST00000455595 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.49
DHFRP3-201ENST00000455595 MKRN4PQ13434 485 aaPredicted RBP12□□□□□ -0.49
DHFRP3-201ENST00000455595 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
DHFRP3-201ENST00000455595 PRR29P0C7W0 189 aa11.9□□□□□ -0.5
DHFRP3-201ENST00000455595 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
DHFRP3-201ENST00000455595 PABPN1Q86U42 306 aaKnown RBP eCLIP11.83□□□□□ -0.52
DHFRP3-201ENST00000455595 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
DHFRP3-201ENST00000455595 CLCN6P51797 869 aa11.79□□□□□ -0.52
DHFRP3-201ENST00000455595 FARP1Q9Y4F1 1045 aaPredicted RBP11.76□□□□□ -0.53
DHFRP3-201ENST00000455595 PLSCR2Q9NRY7 297 aa11.7□□□□□ -0.54
DHFRP3-201ENST00000455595 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
DHFRP3-201ENST00000455595 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
DHFRP3-201ENST00000455595 ZRANB1Q9UGI0 708 aa11.56□□□□□ -0.56
DHFRP3-201ENST00000455595 OTUD5Q96G74 571 aa11.5□□□□□ -0.57
DHFRP3-201ENST00000455595 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
DHFRP3-201ENST00000455595 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
DHFRP3-201ENST00000455595 POTEB2H3BUK9 544 aa11.43□□□□□ -0.58
DHFRP3-201ENST00000455595 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
DHFRP3-201ENST00000455595 POTEMA6NI47 508 aa11.41□□□□□ -0.58
DHFRP3-201ENST00000455595 PAK3O75914 559 aaPredicted RBP11.38□□□□□ -0.59
DHFRP3-201ENST00000455595 POTEGQ6S5H5 508 aa11.35□□□□□ -0.59
DHFRP3-201ENST00000455595 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
DHFRP3-201ENST00000455595 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
DHFRP3-201ENST00000455595 PCDH10Q9P2E7 1040 aa11.29□□□□□ -0.6
DHFRP3-201ENST00000455595 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
DHFRP3-201ENST00000455595 ASTLQ6HA08 431 aaPredicted RBP11.24□□□□□ -0.61
DHFRP3-201ENST00000455595 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
DHFRP3-201ENST00000455595 SLC39A7Q92504 469 aa11.22□□□□□ -0.61
DHFRP3-201ENST00000455595 C7P10643 843 aa11.21□□□□□ -0.61
DHFRP3-201ENST00000455595 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms