RNA–Protein interactions for RNA: ENST00000455399.1

PTCHD1-AS-201, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 3 BASIC

Gene PTCHD1-AS, Length 718 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-201ENST00000455399 AEBP2Q6ZN18 517 aaPredicted RBP17.93■□□□□ 0.46
PTCHD1-AS-201ENST00000455399 CHIC1Q5VXU3 224 aa17.14■□□□□ 0.33
PTCHD1-AS-201ENST00000455399 SENP3Q9H4L4 574 aaPredicted RBP15.23■□□□□ 0.03
PTCHD1-AS-201ENST00000455399 PHF23Q9BUL5 403 aaPredicted RBP15.06■□□□□ 0
PTCHD1-AS-201ENST00000455399 FOXD1Q16676 465 aa14.22□□□□□ -0.13
PTCHD1-AS-201ENST00000455399 PLPPR3Q6T4P5 718 aa13.73□□□□□ -0.21
PTCHD1-AS-201ENST00000455399 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.26
PTCHD1-AS-201ENST00000455399 ADRA2BP18089 450 aa13.34□□□□□ -0.27
PTCHD1-AS-201ENST00000455399 MSH5O43196 834 aa13.32□□□□□ -0.28
PTCHD1-AS-201ENST00000455399 POTEDQ86YR6 584 aa13.27□□□□□ -0.29
PTCHD1-AS-201ENST00000455399 PIAS4Q8N2W9 510 aaPredicted RBP13.27□□□□□ -0.29
PTCHD1-AS-201ENST00000455399 MAPK8IP2Q13387 824 aaPredicted RBP12.22□□□□□ -0.45
PTCHD1-AS-201ENST00000455399 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
PTCHD1-AS-201ENST00000455399 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
PTCHD1-AS-201ENST00000455399 PPP4R3CPQ6ZMV5 832 aa12.06□□□□□ -0.48
PTCHD1-AS-201ENST00000455399 NISCHQ9Y2I1 1504 aa12□□□□□ -0.49
PTCHD1-AS-201ENST00000455399 CNKSR2Q8WXI2 1034 aa11.8□□□□□ -0.52
PTCHD1-AS-201ENST00000455399 HOXD11P31277 338 aaPredicted RBP11.74□□□□□ -0.53
PTCHD1-AS-201ENST00000455399 RNF216Q9NWF9 866 aaPredicted RBP11.67□□□□□ -0.54
PTCHD1-AS-201ENST00000455399 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
PTCHD1-AS-201ENST00000455399 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
PTCHD1-AS-201ENST00000455399 CACNB1Q02641 598 aaPredicted RBP11.54□□□□□ -0.56
PTCHD1-AS-201ENST00000455399 NPM3O75607 178 aaKnown RBP11.49□□□□□ -0.57
PTCHD1-AS-201ENST00000455399 KCNA4P22459 653 aa11.39□□□□□ -0.59
PTCHD1-AS-201ENST00000455399 RNF39Q9H2S5 420 aa11.37□□□□□ -0.59
PTCHD1-AS-201ENST00000455399 DNAJC5BQ9UF47 199 aa11.31□□□□□ -0.6
PTCHD1-AS-201ENST00000455399 ABCC9O60706 1549 aa11.19□□□□□ -0.62
PTCHD1-AS-201ENST00000455399 C1QBPQ07021 282 aaKnown RBP11.17□□□□□ -0.62
PTCHD1-AS-201ENST00000455399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTCHD1-AS-201ENST00000455399 SLC4A2P04920 1241 aa10.96□□□□□ -0.65
PTCHD1-AS-201ENST00000455399 U3KPZ7 1027 aaPredicted RBP10.96□□□□□ -0.65
PTCHD1-AS-201ENST00000455399 CCDC180Q9P1Z9 1646 aa10.9□□□□□ -0.66
PTCHD1-AS-201ENST00000455399 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
PTCHD1-AS-201ENST00000455399 SLC4A1APQ9BWU0 796 aaKnown RBP10.74□□□□□ -0.69
PTCHD1-AS-201ENST00000455399 CAPN15O75808 1086 aa10.68□□□□□ -0.7
PTCHD1-AS-201ENST00000455399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.64□□□□□ -0.71
PTCHD1-AS-201ENST00000455399 HNRNPUL2Q1KMD3 747 aaKnown RBP10.64□□□□□ -0.71
PTCHD1-AS-201ENST00000455399 DSG3P32926 999 aa10.63□□□□□ -0.71
PTCHD1-AS-201ENST00000455399 MYCNP04198 464 aaPredicted RBP10.6□□□□□ -0.71
PTCHD1-AS-201ENST00000455399 APLP2Q06481 763 aa10.6□□□□□ -0.71
PTCHD1-AS-201ENST00000455399 SAMD1Q6SPF0 538 aaPredicted RBP10.59□□□□□ -0.71
PTCHD1-AS-201ENST00000455399 FOXD4L1Q9NU39 408 aa10.56□□□□□ -0.72
PTCHD1-AS-201ENST00000455399 TRHP20396 242 aaPredicted RBP10.55□□□□□ -0.72
PTCHD1-AS-201ENST00000455399 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
PTCHD1-AS-201ENST00000455399 RB1CC1Q8TDY2 1594 aa10.51□□□□□ -0.73
PTCHD1-AS-201ENST00000455399 ZBTB22O15209 634 aa10.5□□□□□ -0.73
PTCHD1-AS-201ENST00000455399 ABCB7O75027 752 aa10.46□□□□□ -0.73
PTCHD1-AS-201ENST00000455399 EHMT2Q96KQ7 1210 aa10.43□□□□□ -0.74
PTCHD1-AS-201ENST00000455399 ATF5Q9Y2D1 282 aaPredicted RBP10.38□□□□□ -0.75
PTCHD1-AS-201ENST00000455399 POTEHQ6S545 545 aa10.37□□□□□ -0.75
PTCHD1-AS-201ENST00000455399 PABPN1Q86U42 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
PTCHD1-AS-201ENST00000455399 DCAF8L2P0C7V8 631 aa10.34□□□□□ -0.75
PTCHD1-AS-201ENST00000455399 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
PTCHD1-AS-201ENST00000455399 NACADO15069 1562 aa10.34□□□□□ -0.75
PTCHD1-AS-201ENST00000455399 UNC13AQ9UPW8 1703 aa10.32□□□□□ -0.76
PTCHD1-AS-201ENST00000455399 POLA2Q14181 598 aa10.31□□□□□ -0.76
PTCHD1-AS-201ENST00000455399 ATXN8OSP0DMR3 200 aa10.23□□□□□ -0.77
PTCHD1-AS-201ENST00000455399 BICRAQ9NZM4 1560 aa10.18□□□□□ -0.78
PTCHD1-AS-201ENST00000455399 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
PTCHD1-AS-201ENST00000455399 ZBTB12Q9Y330 459 aaPredicted RBP10.09□□□□□ -0.79
PTCHD1-AS-201ENST00000455399 CECR2Q9BXF3 1484 aa10.08□□□□□ -0.8
PTCHD1-AS-201ENST00000455399 CC2D2AQ9P2K1 1620 aa10.07□□□□□ -0.8
PTCHD1-AS-201ENST00000455399 MYO15BQ96JP2 1530 aa10.04□□□□□ -0.8
PTCHD1-AS-201ENST00000455399 SCRIBQ14160 1630 aa9.98□□□□□ -0.81
PTCHD1-AS-201ENST00000455399 OSCARQ8IYS5 282 aa9.98□□□□□ -0.81
PTCHD1-AS-201ENST00000455399 SHROOM4Q9ULL8 1493 aa9.97□□□□□ -0.81
PTCHD1-AS-201ENST00000455399 EIF4G1Q04637 1599 aaKnown RBP9.97□□□□□ -0.81
PTCHD1-AS-201ENST00000455399 CHRDL2Q6WN34 429 aa9.96□□□□□ -0.82
PTCHD1-AS-201ENST00000455399 DNAJC5Q9H3Z4 198 aa9.95□□□□□ -0.82
PTCHD1-AS-201ENST00000455399 MKRN4PQ13434 485 aaPredicted RBP9.92□□□□□ -0.82
PTCHD1-AS-201ENST00000455399 AKT1S1Q96B36 256 aa9.92□□□□□ -0.82
PTCHD1-AS-201ENST00000455399 FBLN2P98095 1184 aa9.9□□□□□ -0.82
PTCHD1-AS-201ENST00000455399 ZCCHC6Q5VYS8 1495 aaKnown RBP9.89□□□□□ -0.83
PTCHD1-AS-201ENST00000455399 DCAF1Q9Y4B6 1507 aa9.84□□□□□ -0.83
PTCHD1-AS-201ENST00000455399 REM2Q8IYK8 340 aaPredicted RBP9.83□□□□□ -0.84
PTCHD1-AS-201ENST00000455399 SPDYE2BA6NHP3 402 aa9.81□□□□□ -0.84
PTCHD1-AS-201ENST00000455399 SPDYE6P0CI01 402 aa9.81□□□□□ -0.84
PTCHD1-AS-201ENST00000455399 SPDYE2Q495Y8 402 aa9.81□□□□□ -0.84
PTCHD1-AS-201ENST00000455399 PITPNM1O00562 1244 aa9.73□□□□□ -0.85
PTCHD1-AS-201ENST00000455399 SSUH2Q9Y2M2 353 aa9.73□□□□□ -0.85
PTCHD1-AS-201ENST00000455399 PIP4P2Q8N4L2 257 aa9.71□□□□□ -0.86
PTCHD1-AS-201ENST00000455399 ZNF692Q9BU19 519 aaPredicted RBP9.71□□□□□ -0.86
PTCHD1-AS-201ENST00000455399 CUX2O14529 1486 aa9.69□□□□□ -0.86
PTCHD1-AS-201ENST00000455399 ERCC6Q03468 1493 aa9.69□□□□□ -0.86
PTCHD1-AS-201ENST00000455399 SP7Q8TDD2 431 aaPredicted RBP9.65□□□□□ -0.86
PTCHD1-AS-201ENST00000455399 FXR2P51116 673 aaKnown RBP eCLIP9.64□□□□□ -0.87
PTCHD1-AS-201ENST00000455399 SPDYE1Q8NFV5 336 aaPredicted RBP9.6□□□□□ -0.87
PTCHD1-AS-201ENST00000455399 HAX1O00165 279 aa9.56□□□□□ -0.88
PTCHD1-AS-201ENST00000455399 CLEC11AQ9Y240 323 aa9.56□□□□□ -0.88
PTCHD1-AS-201ENST00000455399 TRIM41Q8WV44 630 aa9.53□□□□□ -0.88
PTCHD1-AS-201ENST00000455399 NESP48681 1621 aa9.53□□□□□ -0.88
PTCHD1-AS-201ENST00000455399 NCAPD3P42695 1498 aa9.51□□□□□ -0.89
PTCHD1-AS-201ENST00000455399 ATAD2BQ9ULI0 1458 aa9.48□□□□□ -0.89
PTCHD1-AS-201ENST00000455399 THOC2Q8NI27 1593 aaKnown RBP9.47□□□□□ -0.89
PTCHD1-AS-201ENST00000455399 SPDYE4A6NLX3 237 aa9.47□□□□□ -0.89
PTCHD1-AS-201ENST00000455399 SMARCA2P51531 1590 aa9.46□□□□□ -0.89
PTCHD1-AS-201ENST00000455399 PRKAR2AP13861 404 aaKnown RBP9.46□□□□□ -0.9
PTCHD1-AS-201ENST00000455399 EVX2Q03828 476 aa9.45□□□□□ -0.9
PTCHD1-AS-201ENST00000455399 HMGXB3Q12766 1538 aa9.45□□□□□ -0.9
PTCHD1-AS-201ENST00000455399 SMARCA4P51532 1647 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms