RNA–Protein interactions for RNA: ENST00000453841.1

CBX1P2-201, Transcript of chromobox 1 pseudogene 2, humanhuman

BASIC

Gene CBX1P2, Length 458 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P2-201ENST00000453841 AEBP2Q6ZN18 517 aaPredicted RBP16.36■□□□□ 0.21
CBX1P2-201ENST00000453841 CHIC1Q5VXU3 224 aa16.09■□□□□ 0.17
CBX1P2-201ENST00000453841 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.13
CBX1P2-201ENST00000453841 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
CBX1P2-201ENST00000453841 PLPPR3Q6T4P5 718 aa13.12□□□□□ -0.31
CBX1P2-201ENST00000453841 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
CBX1P2-201ENST00000453841 NISCHQ9Y2I1 1504 aa12.97□□□□□ -0.33
CBX1P2-201ENST00000453841 ABCC9O60706 1549 aa12.93□□□□□ -0.34
CBX1P2-201ENST00000453841 FOXD1Q16676 465 aa12.84□□□□□ -0.35
CBX1P2-201ENST00000453841 ADRA2BP18089 450 aa12.52□□□□□ -0.41
CBX1P2-201ENST00000453841 PPP6R1Q9UPN7 881 aa12.51□□□□□ -0.41
CBX1P2-201ENST00000453841 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
CBX1P2-201ENST00000453841 PIAS4Q8N2W9 510 aaPredicted RBP12.15□□□□□ -0.46
CBX1P2-201ENST00000453841 CCDC180Q9P1Z9 1646 aa11.99□□□□□ -0.49
CBX1P2-201ENST00000453841 PABPN1Q86U42 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
CBX1P2-201ENST00000453841 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
CBX1P2-201ENST00000453841 MSH5O43196 834 aa11.84□□□□□ -0.51
CBX1P2-201ENST00000453841 CECR2Q9BXF3 1484 aa11.71□□□□□ -0.53
CBX1P2-201ENST00000453841 POTEDQ86YR6 584 aa11.65□□□□□ -0.54
CBX1P2-201ENST00000453841 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
CBX1P2-201ENST00000453841 PPP4R3CPQ6ZMV5 832 aa11.63□□□□□ -0.55
CBX1P2-201ENST00000453841 CC2D2AQ9P2K1 1620 aa11.62□□□□□ -0.55
CBX1P2-201ENST00000453841 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
CBX1P2-201ENST00000453841 BICRAQ9NZM4 1560 aa11.61□□□□□ -0.55
CBX1P2-201ENST00000453841 KCNA4P22459 653 aa11.56□□□□□ -0.56
CBX1P2-201ENST00000453841 NACADO15069 1562 aa11.54□□□□□ -0.56
CBX1P2-201ENST00000453841 CUX2O14529 1486 aa11.44□□□□□ -0.58
CBX1P2-201ENST00000453841 EIF4G1Q04637 1599 aaKnown RBP11.37□□□□□ -0.59
CBX1P2-201ENST00000453841 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
CBX1P2-201ENST00000453841 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
CBX1P2-201ENST00000453841 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
CBX1P2-201ENST00000453841 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
CBX1P2-201ENST00000453841 SHROOM4Q9ULL8 1493 aa11.24□□□□□ -0.61
CBX1P2-201ENST00000453841 CNKSR2Q8WXI2 1034 aa11.22□□□□□ -0.61
CBX1P2-201ENST00000453841 NPM3O75607 178 aaKnown RBP11.2□□□□□ -0.62
CBX1P2-201ENST00000453841 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
CBX1P2-201ENST00000453841 MYO15BQ96JP2 1530 aa11.05□□□□□ -0.64
CBX1P2-201ENST00000453841 DMRT2Q9Y5R5 561 aa11.04□□□□□ -0.64
CBX1P2-201ENST00000453841 SLC4A1APQ9BWU0 796 aaKnown RBP11.02□□□□□ -0.65
CBX1P2-201ENST00000453841 EHMT2Q96KQ7 1210 aa10.96□□□□□ -0.65
CBX1P2-201ENST00000453841 RNF216Q9NWF9 866 aaPredicted RBP10.95□□□□□ -0.66
CBX1P2-201ENST00000453841 SCRIBQ14160 1630 aa10.95□□□□□ -0.66
CBX1P2-201ENST00000453841 THOC2Q8NI27 1593 aaKnown RBP10.91□□□□□ -0.66
CBX1P2-201ENST00000453841 ILDR1Q86SU0 546 aaPredicted RBP10.89□□□□□ -0.67
CBX1P2-201ENST00000453841 NESP48681 1621 aa10.87□□□□□ -0.67
CBX1P2-201ENST00000453841 HOXD11P31277 338 aaPredicted RBP10.86□□□□□ -0.67
CBX1P2-201ENST00000453841 BAZ1AQ9NRL2 1556 aaPredicted RBP10.79□□□□□ -0.68
CBX1P2-201ENST00000453841 TRHP20396 242 aaPredicted RBP10.79□□□□□ -0.68
CBX1P2-201ENST00000453841 RIMBP3CA6NJZ7 1639 aa10.79□□□□□ -0.68
CBX1P2-201ENST00000453841 RIMBP3BA6NNM3 1639 aa10.79□□□□□ -0.68
CBX1P2-201ENST00000453841 RIMBP3Q9UFD9 1639 aa10.79□□□□□ -0.68
CBX1P2-201ENST00000453841 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
CBX1P2-201ENST00000453841 SMARCA2P51531 1590 aa10.77□□□□□ -0.69
CBX1P2-201ENST00000453841 CSRNP3Q8WYN3 585 aa10.71□□□□□ -0.69
CBX1P2-201ENST00000453841 KIF21AQ7Z4S6 1674 aa10.69□□□□□ -0.7
CBX1P2-201ENST00000453841 NCAPD3P42695 1498 aa10.68□□□□□ -0.7
CBX1P2-201ENST00000453841 DCAF8L1A6NGE4 600 aa10.66□□□□□ -0.7
CBX1P2-201ENST00000453841 ZBTB22O15209 634 aa10.65□□□□□ -0.7
CBX1P2-201ENST00000453841 ARHGEF11O15085 1522 aa10.64□□□□□ -0.71
CBX1P2-201ENST00000453841 CYB5RLQ6IPT4 315 aa10.63□□□□□ -0.71
CBX1P2-201ENST00000453841 DCAF1Q9Y4B6 1507 aa10.6□□□□□ -0.71
CBX1P2-201ENST00000453841 LAMC3Q9Y6N6 1575 aa10.57□□□□□ -0.72
CBX1P2-201ENST00000453841 FOXD4L1Q9NU39 408 aa10.55□□□□□ -0.72
CBX1P2-201ENST00000453841 ZCCHC6Q5VYS8 1495 aaKnown RBP10.55□□□□□ -0.72
CBX1P2-201ENST00000453841 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
CBX1P2-201ENST00000453841 SLC4A2P04920 1241 aa10.54□□□□□ -0.72
CBX1P2-201ENST00000453841 PDS5BQ9NTI5 1447 aa10.53□□□□□ -0.72
CBX1P2-201ENST00000453841 WDR62O43379 1518 aa10.53□□□□□ -0.72
CBX1P2-201ENST00000453841 MRC2Q9UBG0 1479 aa10.52□□□□□ -0.73
CBX1P2-201ENST00000453841 HMGXB3Q12766 1538 aa10.52□□□□□ -0.73
CBX1P2-201ENST00000453841 ARAP1Q96P48 1450 aa10.5□□□□□ -0.73
CBX1P2-201ENST00000453841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.42□□□□□ -0.74
CBX1P2-201ENST00000453841 BAZ1BQ9UIG0 1483 aaKnown RBP10.38□□□□□ -0.75
CBX1P2-201ENST00000453841 CADPSQ9ULU8 1353 aa10.31□□□□□ -0.76
CBX1P2-201ENST00000453841 MYCNP04198 464 aaPredicted RBP10.31□□□□□ -0.76
CBX1P2-201ENST00000453841 SMARCA4P51532 1647 aa10.31□□□□□ -0.76
CBX1P2-201ENST00000453841 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
CBX1P2-201ENST00000453841 KDM4FA0A1W2PPD8 638 aa10.29□□□□□ -0.76
CBX1P2-201ENST00000453841 ZNF608Q9ULD9 1512 aaPredicted RBP10.26□□□□□ -0.77
CBX1P2-201ENST00000453841 RSF1Q96T23 1441 aaPredicted RBP10.25□□□□□ -0.77
CBX1P2-201ENST00000453841 U3KPZ7 1027 aaPredicted RBP10.25□□□□□ -0.77
CBX1P2-201ENST00000453841 LMTK3Q96Q04 1460 aa10.23□□□□□ -0.77
CBX1P2-201ENST00000453841 CHD1O14646 1710 aa10.23□□□□□ -0.77
CBX1P2-201ENST00000453841 URB2Q14146 1524 aaKnown RBP10.23□□□□□ -0.77
CBX1P2-201ENST00000453841 FANCD2Q9BXW9 1451 aa10.22□□□□□ -0.77
CBX1P2-201ENST00000453841 FBXO41Q8TF61 875 aa10.21□□□□□ -0.77
CBX1P2-201ENST00000453841 SOCS7O14512 581 aa10.19□□□□□ -0.78
CBX1P2-201ENST00000453841 CACNB1Q02641 598 aaPredicted RBP10.19□□□□□ -0.78
CBX1P2-201ENST00000453841 PEG3Q9GZU2 1588 aa10.18□□□□□ -0.78
CBX1P2-201ENST00000453841 ILDR2Q71H61 639 aa10.17□□□□□ -0.78
CBX1P2-201ENST00000453841 ERCC6L2Q5T890 1561 aa10.17□□□□□ -0.78
CBX1P2-201ENST00000453841 FBLN2P98095 1184 aa10.13□□□□□ -0.79
CBX1P2-201ENST00000453841 EIF4G3O43432 1585 aaKnown RBP10.13□□□□□ -0.79
CBX1P2-201ENST00000453841 HECW2Q9P2P5 1572 aa10.13□□□□□ -0.79
CBX1P2-201ENST00000453841 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
CBX1P2-201ENST00000453841 RNF39Q9H2S5 420 aa10.11□□□□□ -0.79
CBX1P2-201ENST00000453841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
CBX1P2-201ENST00000453841 ATXN8OSP0DMR3 200 aa10.1□□□□□ -0.79
CBX1P2-201ENST00000453841 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
CBX1P2-201ENST00000453841 SAMD1Q6SPF0 538 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms