RNA–Protein interactions for RNA: ENST00000453602.1

MTHFD1L-209, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

TSL 5

Gene MTHFD1L, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-209ENST00000453602 AEBP2Q6ZN18 517 aaPredicted RBP32.32■■■□□ 2.76
MTHFD1L-209ENST00000453602 CHIC1Q5VXU3 224 aa31.01■■■□□ 2.55
MTHFD1L-209ENST00000453602 SENP3Q9H4L4 574 aaPredicted RBP27.35■■□□□ 1.97
MTHFD1L-209ENST00000453602 PHF23Q9BUL5 403 aaPredicted RBP27.31■■□□□ 1.96
MTHFD1L-209ENST00000453602 FOXD1Q16676 465 aa25.54■■□□□ 1.68
MTHFD1L-209ENST00000453602 PLPPR3Q6T4P5 718 aa24.89■■□□□ 1.58
MTHFD1L-209ENST00000453602 PPP6R1Q9UPN7 881 aa24.26■■□□□ 1.47
MTHFD1L-209ENST00000453602 ADRA2BP18089 450 aa24.15■■□□□ 1.46
MTHFD1L-209ENST00000453602 PIAS4Q8N2W9 510 aaPredicted RBP23.89■■□□□ 1.41
MTHFD1L-209ENST00000453602 MSH5O43196 834 aa23.62■■□□□ 1.37
MTHFD1L-209ENST00000453602 POTEDQ86YR6 584 aa22.45■■□□□ 1.18
MTHFD1L-209ENST00000453602 MAPK8IP2Q13387 824 aaPredicted RBP22.09■■□□□ 1.13
MTHFD1L-209ENST00000453602 SCAF1Q9H7N4 1312 aaKnown RBP21.93■■□□□ 1.1
MTHFD1L-209ENST00000453602 PPP4R3CPQ6ZMV5 832 aa21.92■■□□□ 1.1
MTHFD1L-209ENST00000453602 DMRT2Q9Y5R5 561 aa21.8■■□□□ 1.08
MTHFD1L-209ENST00000453602 CNKSR2Q8WXI2 1034 aa21.38■■□□□ 1.01
MTHFD1L-209ENST00000453602 HOXD11P31277 338 aaPredicted RBP21.18■□□□□ 0.98
MTHFD1L-209ENST00000453602 NCBP3Q53F19 620 aaKnown RBP21.1■□□□□ 0.97
MTHFD1L-209ENST00000453602 RNF216Q9NWF9 866 aaPredicted RBP21.1■□□□□ 0.97
MTHFD1L-209ENST00000453602 NPM3O75607 178 aaKnown RBP20.92■□□□□ 0.94
MTHFD1L-209ENST00000453602 KCNA4P22459 653 aa20.91■□□□□ 0.94
MTHFD1L-209ENST00000453602 DCAF8L1A6NGE4 600 aa20.78■□□□□ 0.92
MTHFD1L-209ENST00000453602 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
MTHFD1L-209ENST00000453602 RNF39Q9H2S5 420 aa20.28■□□□□ 0.84
MTHFD1L-209ENST00000453602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.81
MTHFD1L-209ENST00000453602 CACNB1Q02641 598 aaPredicted RBP20.02■□□□□ 0.8
MTHFD1L-209ENST00000453602 C1QBPQ07021 282 aaKnown RBP19.94■□□□□ 0.78
MTHFD1L-209ENST00000453602 SLC4A2P04920 1241 aa19.93■□□□□ 0.78
MTHFD1L-209ENST00000453602 U3KPZ7 1027 aaPredicted RBP19.82■□□□□ 0.76
MTHFD1L-209ENST00000453602 SLC4A1APQ9BWU0 796 aaKnown RBP19.75■□□□□ 0.75
MTHFD1L-209ENST00000453602 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
MTHFD1L-209ENST00000453602 ZBTB22O15209 634 aa19.31■□□□□ 0.68
MTHFD1L-209ENST00000453602 FOXD4L1Q9NU39 408 aa19.31■□□□□ 0.68
MTHFD1L-209ENST00000453602 MYCNP04198 464 aaPredicted RBP19.27■□□□□ 0.68
MTHFD1L-209ENST00000453602 CAPN15O75808 1086 aa19.25■□□□□ 0.67
MTHFD1L-209ENST00000453602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
MTHFD1L-209ENST00000453602 HNRNPUL2Q1KMD3 747 aaKnown RBP19.24■□□□□ 0.67
MTHFD1L-209ENST00000453602 SAMD1Q6SPF0 538 aaPredicted RBP19.19■□□□□ 0.66
MTHFD1L-209ENST00000453602 DSG3P32926 999 aa19.13■□□□□ 0.65
MTHFD1L-209ENST00000453602 APLP2Q06481 763 aa19.1■□□□□ 0.65
MTHFD1L-209ENST00000453602 TRHP20396 242 aaPredicted RBP19.06■□□□□ 0.64
MTHFD1L-209ENST00000453602 ZNF219Q9P2Y4 722 aaPredicted RBP19.01■□□□□ 0.63
MTHFD1L-209ENST00000453602 ATF5Q9Y2D1 282 aaPredicted RBP18.93■□□□□ 0.62
MTHFD1L-209ENST00000453602 ABCB7O75027 752 aa18.9■□□□□ 0.62
MTHFD1L-209ENST00000453602 CSRNP3Q8WYN3 585 aa18.74■□□□□ 0.59
MTHFD1L-209ENST00000453602 POLA2Q14181 598 aa18.68■□□□□ 0.58
MTHFD1L-209ENST00000453602 ATXN8OSP0DMR3 200 aa18.66■□□□□ 0.58
MTHFD1L-209ENST00000453602 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
MTHFD1L-209ENST00000453602 ZBTB12Q9Y330 459 aaPredicted RBP18.23■□□□□ 0.51
MTHFD1L-209ENST00000453602 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
MTHFD1L-209ENST00000453602 MKRN4PQ13434 485 aaPredicted RBP18.08■□□□□ 0.48
MTHFD1L-209ENST00000453602 OSCARQ8IYS5 282 aa18.08■□□□□ 0.48
MTHFD1L-209ENST00000453602 FBLN2P98095 1184 aa17.97■□□□□ 0.47
MTHFD1L-209ENST00000453602 AKT1S1Q96B36 256 aa17.84■□□□□ 0.45
MTHFD1L-209ENST00000453602 SPDYE2BA6NHP3 402 aa17.76■□□□□ 0.43
MTHFD1L-209ENST00000453602 SPDYE6P0CI01 402 aa17.76■□□□□ 0.43
MTHFD1L-209ENST00000453602 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
MTHFD1L-209ENST00000453602 REM2Q8IYK8 340 aaPredicted RBP17.72■□□□□ 0.43
MTHFD1L-209ENST00000453602 POTEHQ6S545 545 aa17.64■□□□□ 0.41
MTHFD1L-209ENST00000453602 CHRDL2Q6WN34 429 aa17.64■□□□□ 0.41
MTHFD1L-209ENST00000453602 SSUH2Q9Y2M2 353 aa17.64■□□□□ 0.41
MTHFD1L-209ENST00000453602 ZNF692Q9BU19 519 aaPredicted RBP17.61■□□□□ 0.41
MTHFD1L-209ENST00000453602 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
MTHFD1L-209ENST00000453602 PABPN1Q86U42 306 aaKnown RBP eCLIP17.39■□□□□ 0.37
MTHFD1L-209ENST00000453602 PIP4P2Q8N4L2 257 aa17.35■□□□□ 0.37
MTHFD1L-209ENST00000453602 SPDYE1Q8NFV5 336 aaPredicted RBP17.33■□□□□ 0.36
MTHFD1L-209ENST00000453602 SPDYE4A6NLX3 237 aa17.32■□□□□ 0.36
MTHFD1L-209ENST00000453602 FXR2P51116 673 aaKnown RBP eCLIP17.31■□□□□ 0.363e-7■■■■■ 27.1
MTHFD1L-209ENST00000453602 CLEC11AQ9Y240 323 aa17.28■□□□□ 0.36
MTHFD1L-209ENST00000453602 PROM2Q8N271 834 aa17.07■□□□□ 0.32
MTHFD1L-209ENST00000453602 PRR29P0C7W0 189 aa17.05■□□□□ 0.32
MTHFD1L-209ENST00000453602 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
MTHFD1L-209ENST00000453602 CHADLQ6NUI6 762 aa16.98■□□□□ 0.31
MTHFD1L-209ENST00000453602 STAG3Q9UJ98 1225 aa16.92■□□□□ 0.3
MTHFD1L-209ENST00000453602 FKBP8Q14318 412 aa16.89■□□□□ 0.29
MTHFD1L-209ENST00000453602 HAX1O00165 279 aa16.83■□□□□ 0.28
MTHFD1L-209ENST00000453602 CREBZFQ9NS37 354 aa16.83■□□□□ 0.28
MTHFD1L-209ENST00000453602 EVX2Q03828 476 aa16.82■□□□□ 0.28
MTHFD1L-209ENST00000453602 FARP1Q9Y4F1 1045 aaPredicted RBP16.76■□□□□ 0.27
MTHFD1L-209ENST00000453602 C19orf67A6NJJ6 358 aa16.74■□□□□ 0.27
MTHFD1L-209ENST00000453602 SP7Q8TDD2 431 aaPredicted RBP16.72■□□□□ 0.27
MTHFD1L-209ENST00000453602 MNX1P50219 401 aaPredicted RBP16.65■□□□□ 0.26
MTHFD1L-209ENST00000453602 CD44P16070 742 aaKnown RBP16.52■□□□□ 0.24
MTHFD1L-209ENST00000453602 MIER1Q8N108 512 aa16.44■□□□□ 0.22
MTHFD1L-209ENST00000453602 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
MTHFD1L-209ENST00000453602 GABBR2O75899 941 aa16.38■□□□□ 0.21
MTHFD1L-209ENST00000453602 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
MTHFD1L-209ENST00000453602 PLCD3Q8N3E9 789 aa16.34■□□□□ 0.21
MTHFD1L-209ENST00000453602 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
MTHFD1L-209ENST00000453602 ZNF579Q8NAF0 562 aaKnown RBP16.31■□□□□ 0.2
MTHFD1L-209ENST00000453602 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
MTHFD1L-209ENST00000453602 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
MTHFD1L-209ENST00000453602 RASEFQ8IZ41 740 aa16.21■□□□□ 0.19
MTHFD1L-209ENST00000453602 PHF12Q96QT6 1004 aa16.21■□□□□ 0.19
MTHFD1L-209ENST00000453602 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
MTHFD1L-209ENST00000453602 NUBP1P53384 320 aa16.18■□□□□ 0.18
MTHFD1L-209ENST00000453602 TSPYL2Q9H2G4 693 aaPredicted RBP16.18■□□□□ 0.18
MTHFD1L-209ENST00000453602 CLCN6P51797 869 aa16.15■□□□□ 0.18
MTHFD1L-209ENST00000453602 ZBTB47Q9UFB7 747 aaPredicted RBP16.14■□□□□ 0.17
MTHFD1L-209ENST00000453602 CCDC61Q9Y6R9 512 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms