RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
KARSP1-201ENST00000451871 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
KARSP1-201ENST00000451871 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
KARSP1-201ENST00000451871 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
KARSP1-201ENST00000451871 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
KARSP1-201ENST00000451871 FOXD1Q16676 465 aa15.8■□□□□ 0.12
KARSP1-201ENST00000451871 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
KARSP1-201ENST00000451871 ADRA2BP18089 450 aa15.57■□□□□ 0.08
KARSP1-201ENST00000451871 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
KARSP1-201ENST00000451871 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
KARSP1-201ENST00000451871 KCNA4P22459 653 aa14.82□□□□□ -0.04
KARSP1-201ENST00000451871 PPP4R3CPQ6ZMV5 832 aa14.61□□□□□ -0.07
KARSP1-201ENST00000451871 ABCC9O60706 1549 aa14.53□□□□□ -0.08
KARSP1-201ENST00000451871 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
KARSP1-201ENST00000451871 MSH5O43196 834 aa14.3□□□□□ -0.12
KARSP1-201ENST00000451871 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
KARSP1-201ENST00000451871 EHMT2Q96KQ7 1210 aa14.27□□□□□ -0.12
KARSP1-201ENST00000451871 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
KARSP1-201ENST00000451871 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
KARSP1-201ENST00000451871 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
KARSP1-201ENST00000451871 CNKSR2Q8WXI2 1034 aa14.08□□□□□ -0.16
KARSP1-201ENST00000451871 MAPK8IP2Q13387 824 aaPredicted RBP14.02□□□□□ -0.16
KARSP1-201ENST00000451871 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
KARSP1-201ENST00000451871 CCDC180Q9P1Z9 1646 aa13.91□□□□□ -0.18
KARSP1-201ENST00000451871 DNAJC5Q9H3Z4 198 aa13.9□□□□□ -0.18
KARSP1-201ENST00000451871 RNF216Q9NWF9 866 aaPredicted RBP13.71□□□□□ -0.22
KARSP1-201ENST00000451871 ZBTB22O15209 634 aa13.68□□□□□ -0.22
KARSP1-201ENST00000451871 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
KARSP1-201ENST00000451871 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
KARSP1-201ENST00000451871 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
KARSP1-201ENST00000451871 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
KARSP1-201ENST00000451871 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
KARSP1-201ENST00000451871 SLC4A2P04920 1241 aa13.3□□□□□ -0.28
KARSP1-201ENST00000451871 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
KARSP1-201ENST00000451871 NACADO15069 1562 aa13.28□□□□□ -0.28
KARSP1-201ENST00000451871 CECR2Q9BXF3 1484 aa13.18□□□□□ -0.3
KARSP1-201ENST00000451871 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
KARSP1-201ENST00000451871 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
KARSP1-201ENST00000451871 BICRAQ9NZM4 1560 aa13.13□□□□□ -0.31
KARSP1-201ENST00000451871 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
KARSP1-201ENST00000451871 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
KARSP1-201ENST00000451871 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
KARSP1-201ENST00000451871 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
KARSP1-201ENST00000451871 CUX2O14529 1486 aa12.93□□□□□ -0.34
KARSP1-201ENST00000451871 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
KARSP1-201ENST00000451871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
KARSP1-201ENST00000451871 SHROOM4Q9ULL8 1493 aa12.87□□□□□ -0.35
KARSP1-201ENST00000451871 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
KARSP1-201ENST00000451871 U3KPZ7 1027 aaPredicted RBP12.79□□□□□ -0.36
KARSP1-201ENST00000451871 ATF5Q9Y2D1 282 aaPredicted RBP12.76□□□□□ -0.37
KARSP1-201ENST00000451871 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
KARSP1-201ENST00000451871 RTN4Q9NQC3 1192 aaKnown RBP12.66□□□□□ -0.38
KARSP1-201ENST00000451871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
KARSP1-201ENST00000451871 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
KARSP1-201ENST00000451871 SAMD1Q6SPF0 538 aaPredicted RBP12.66□□□□□ -0.38
KARSP1-201ENST00000451871 SCRIBQ14160 1630 aa12.65□□□□□ -0.38
KARSP1-201ENST00000451871 ERCC6Q03468 1493 aa12.63□□□□□ -0.39
KARSP1-201ENST00000451871 DCAF1Q9Y4B6 1507 aa12.59□□□□□ -0.39
KARSP1-201ENST00000451871 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
KARSP1-201ENST00000451871 FKBP8Q14318 412 aa12.52□□□□□ -0.41
KARSP1-201ENST00000451871 AMER1Q5JTC6 1135 aaPredicted RBP12.5□□□□□ -0.41
KARSP1-201ENST00000451871 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
KARSP1-201ENST00000451871 APLP2Q06481 763 aa12.37□□□□□ -0.43
KARSP1-201ENST00000451871 THOC2Q8NI27 1593 aaKnown RBP12.36□□□□□ -0.43
KARSP1-201ENST00000451871 RNF39Q9H2S5 420 aa12.36□□□□□ -0.43
KARSP1-201ENST00000451871 POTEDQ86YR6 584 aa12.35□□□□□ -0.43
KARSP1-201ENST00000451871 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
KARSP1-201ENST00000451871 NCAPD3P42695 1498 aa12.28□□□□□ -0.44
KARSP1-201ENST00000451871 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
KARSP1-201ENST00000451871 NESP48681 1621 aa12.25□□□□□ -0.45
KARSP1-201ENST00000451871 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
KARSP1-201ENST00000451871 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
KARSP1-201ENST00000451871 CAPN15O75808 1086 aa12.19□□□□□ -0.46
KARSP1-201ENST00000451871 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
KARSP1-201ENST00000451871 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
KARSP1-201ENST00000451871 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
KARSP1-201ENST00000451871 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
KARSP1-201ENST00000451871 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
KARSP1-201ENST00000451871 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
KARSP1-201ENST00000451871 POLA2Q14181 598 aa12.17□□□□□ -0.46
KARSP1-201ENST00000451871 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
KARSP1-201ENST00000451871 HMGXB3Q12766 1538 aa12.12□□□□□ -0.47
KARSP1-201ENST00000451871 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
KARSP1-201ENST00000451871 ILDR1Q86SU0 546 aaPredicted RBP12.08□□□□□ -0.48
KARSP1-201ENST00000451871 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
KARSP1-201ENST00000451871 LAMC3Q9Y6N6 1575 aa12.07□□□□□ -0.48
KARSP1-201ENST00000451871 FBLN2P98095 1184 aa12.05□□□□□ -0.48
KARSP1-201ENST00000451871 ABCB7O75027 752 aa12.04□□□□□ -0.48
KARSP1-201ENST00000451871 PDS5BQ9NTI5 1447 aa12.03□□□□□ -0.48
KARSP1-201ENST00000451871 SMARCA4P51532 1647 aa12.02□□□□□ -0.48
KARSP1-201ENST00000451871 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
KARSP1-201ENST00000451871 ARHGEF11O15085 1522 aa11.99□□□□□ -0.49
KARSP1-201ENST00000451871 PROM2Q8N271 834 aa11.97□□□□□ -0.49
KARSP1-201ENST00000451871 MRC2Q9UBG0 1479 aa11.93□□□□□ -0.5
KARSP1-201ENST00000451871 WDR62O43379 1518 aa11.93□□□□□ -0.5
KARSP1-201ENST00000451871 DSG3P32926 999 aa11.92□□□□□ -0.5
KARSP1-201ENST00000451871 PEG3Q9GZU2 1588 aa11.91□□□□□ -0.5
KARSP1-201ENST00000451871 CADPSQ9ULU8 1353 aa11.89□□□□□ -0.51
KARSP1-201ENST00000451871 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
KARSP1-201ENST00000451871 CYB5RLQ6IPT4 315 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms