RNA–Protein interactions for RNA: ENST00000450482.5

SS18L1-203, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-203ENST00000450482 NISCHQ9Y2I1 1504 aa29.33■■■□□ 2.29
SS18L1-203ENST00000450482 ABCC9O60706 1549 aa26.31■■□□□ 1.8
SS18L1-203ENST00000450482 CCDC180Q9P1Z9 1646 aa26.25■■□□□ 1.79
SS18L1-203ENST00000450482 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
SS18L1-203ENST00000450482 NACADO15069 1562 aa24.88■■□□□ 1.57
SS18L1-203ENST00000450482 DNAJC5BQ9UF47 199 aa24.75■■□□□ 1.55
SS18L1-203ENST00000450482 DCAF8L2P0C7V8 631 aa24.68■■□□□ 1.54
SS18L1-203ENST00000450482 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
SS18L1-203ENST00000450482 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
SS18L1-203ENST00000450482 ZCCHC6Q5VYS8 1495 aaKnown RBP24.32■■□□□ 1.48
SS18L1-203ENST00000450482 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
SS18L1-203ENST00000450482 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
SS18L1-203ENST00000450482 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
SS18L1-203ENST00000450482 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
SS18L1-203ENST00000450482 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
SS18L1-203ENST00000450482 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
SS18L1-203ENST00000450482 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
SS18L1-203ENST00000450482 EIF4G1Q04637 1599 aaKnown RBP23.72■■□□□ 1.39
SS18L1-203ENST00000450482 NCAPD3P42695 1498 aa23.03■■□□□ 1.28
SS18L1-203ENST00000450482 ATAD2BQ9ULI0 1458 aa22.93■■□□□ 1.26
SS18L1-203ENST00000450482 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
SS18L1-203ENST00000450482 SMARCA2P51531 1590 aa22.83■■□□□ 1.25
SS18L1-203ENST00000450482 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
SS18L1-203ENST00000450482 DNAJC5Q9H3Z4 198 aa22.75■■□□□ 1.23
SS18L1-203ENST00000450482 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
SS18L1-203ENST00000450482 CUX2O14529 1486 aa22.73■■□□□ 1.23
SS18L1-203ENST00000450482 ERCC6Q03468 1493 aa22.72■■□□□ 1.23
SS18L1-203ENST00000450482 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
SS18L1-203ENST00000450482 BAZ1BQ9UIG0 1483 aaKnown RBP22.67■■□□□ 1.22
SS18L1-203ENST00000450482 NESP48681 1621 aa22.6■■□□□ 1.21
SS18L1-203ENST00000450482 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
SS18L1-203ENST00000450482 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
SS18L1-203ENST00000450482 THOC2Q8NI27 1593 aaKnown RBP22.36■■□□□ 1.17
SS18L1-203ENST00000450482 PDS5BQ9NTI5 1447 aa22.35■■□□□ 1.17
SS18L1-203ENST00000450482 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
SS18L1-203ENST00000450482 WIZO95785 1651 aa22.23■■□□□ 1.15
SS18L1-203ENST00000450482 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.15
SS18L1-203ENST00000450482 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
SS18L1-203ENST00000450482 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
SS18L1-203ENST00000450482 WDR62O43379 1518 aa22.1■■□□□ 1.13
SS18L1-203ENST00000450482 CFTRP13569 1480 aa22.06■■□□□ 1.12
SS18L1-203ENST00000450482 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
SS18L1-203ENST00000450482 TOP2AP11388 1531 aaKnown RBP22.03■■□□□ 1.12
SS18L1-203ENST00000450482 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
SS18L1-203ENST00000450482 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
SS18L1-203ENST00000450482 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
SS18L1-203ENST00000450482 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
SS18L1-203ENST00000450482 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
SS18L1-203ENST00000450482 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
SS18L1-203ENST00000450482 PRDM2Q13029 1718 aa21.61■■□□□ 1.05
SS18L1-203ENST00000450482 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
SS18L1-203ENST00000450482 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.04
SS18L1-203ENST00000450482 ABCC8Q09428 1581 aa21.56■■□□□ 1.04
SS18L1-203ENST00000450482 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
SS18L1-203ENST00000450482 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
SS18L1-203ENST00000450482 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
SS18L1-203ENST00000450482 TARBP1Q13395 1621 aaKnown RBP21.39■■□□□ 1.01
SS18L1-203ENST00000450482 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.018e-9■■■■■ 28.6
SS18L1-203ENST00000450482 RIMBP3CA6NJZ7 1639 aa21.33■■□□□ 1
SS18L1-203ENST00000450482 RIMBP3BA6NNM3 1639 aa21.33■■□□□ 1
SS18L1-203ENST00000450482 RIMBP3Q9UFD9 1639 aa21.33■■□□□ 1
SS18L1-203ENST00000450482 ARHGEF11O15085 1522 aa21.32■■□□□ 1
SS18L1-203ENST00000450482 RAD54L2Q9Y4B4 1467 aa21.3■■□□□ 1
SS18L1-203ENST00000450482 SOGA1O94964 1423 aa21.29■■□□□ 1
SS18L1-203ENST00000450482 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
SS18L1-203ENST00000450482 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
SS18L1-203ENST00000450482 CUX1P39880 1505 aa21.22■□□□□ 0.99
SS18L1-203ENST00000450482 FBLN2P98095 1184 aa21.2■□□□□ 0.98
SS18L1-203ENST00000450482 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
SS18L1-203ENST00000450482 CHD1O14646 1710 aa21.16■□□□□ 0.98
SS18L1-203ENST00000450482 SNAPC4Q5SXM2 1469 aa21.16■□□□□ 0.98
SS18L1-203ENST00000450482 CYB5RLQ6IPT4 315 aa21.15■□□□□ 0.98
SS18L1-203ENST00000450482 GRIN2BQ13224 1484 aa21.12■□□□□ 0.97
SS18L1-203ENST00000450482 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
SS18L1-203ENST00000450482 MAGI1Q96QZ7 1491 aaPredicted RBP21.12■□□□□ 0.97
SS18L1-203ENST00000450482 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
SS18L1-203ENST00000450482 CHMP7Q8WUX9 453 aaPredicted RBP21.07■□□□□ 0.96
SS18L1-203ENST00000450482 CLASP1Q7Z460 1538 aa21.06■□□□□ 0.96
SS18L1-203ENST00000450482 SYNJ2O15056 1496 aa21.05■□□□□ 0.96
SS18L1-203ENST00000450482 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
SS18L1-203ENST00000450482 GAPVD1Q14C86 1478 aa21.02■□□□□ 0.96
SS18L1-203ENST00000450482 SYNJ1O43426 1573 aa21.01■□□□□ 0.95
SS18L1-203ENST00000450482 ABCA5Q8WWZ7 1642 aa20.95■□□□□ 0.94
SS18L1-203ENST00000450482 WRNQ14191 1432 aaPredicted RBP eCLIP20.94■□□□□ 0.94
SS18L1-203ENST00000450482 PBRM1Q86U86 1689 aa20.89■□□□□ 0.93
SS18L1-203ENST00000450482 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
SS18L1-203ENST00000450482 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
SS18L1-203ENST00000450482 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
SS18L1-203ENST00000450482 BIVM-ERCC5R4GMW8 1640 aa20.82■□□□□ 0.92
SS18L1-203ENST00000450482 NUP160Q12769 1436 aa20.81■□□□□ 0.92
SS18L1-203ENST00000450482 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
SS18L1-203ENST00000450482 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
SS18L1-203ENST00000450482 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
SS18L1-203ENST00000450482 CEP170Q5SW79 1584 aa20.73■□□□□ 0.91
SS18L1-203ENST00000450482 ERCC6L2Q5T890 1561 aa20.71■□□□□ 0.91
SS18L1-203ENST00000450482 SHROOM2Q13796 1616 aa20.65■□□□□ 0.9
SS18L1-203ENST00000450482 PRG4Q92954 1404 aaPredicted RBP20.57■□□□□ 0.88
SS18L1-203ENST00000450482 JPH4Q96JJ6 628 aa20.55■□□□□ 0.88
SS18L1-203ENST00000450482 IGF1RP08069 1367 aa20.51■□□□□ 0.87
SS18L1-203ENST00000450482 RUSC2Q8N2Y8 1516 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms