RNA–Protein interactions for RNA: ENST00000450482.5

SS18L1-203, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 781 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-203ENST00000450482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■■■■■ 93.9
SS18L1-203ENST00000450482 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.5□□□□□ -0.735e-7■■■■■ 65.9
SS18L1-203ENST00000450482 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.85□□□□□ -0.675e-6■■■■■ 55.7
SS18L1-203ENST00000450482 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.06□□□□□ -0.82e-8■■■■■ 49.1
SS18L1-203ENST00000450482 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.05□□□□□ -0.162e-6■■■■■ 39.2
SS18L1-203ENST00000450482 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.92□□□□□ -0.341e-6■■■■■ 37.1
SS18L1-203ENST00000450482 GTF2F1P35269 517 aaKnown RBP eCLIP13.25□□□□□ -0.291e-7■■■■■ 36.6
SS18L1-203ENST00000450482 SF3B1O75533 1304 aaKnown RBP eCLIP12.88□□□□□ -0.351e-6■■■■■ 36.6
SS18L1-203ENST00000450482 PRPF4O43172 522 aaKnown RBP eCLIP11.07□□□□□ -0.641e-7■■■■■ 34.7
SS18L1-203ENST00000450482 ZRANB2O95218 330 aaKnown RBP eCLIP11.34□□□□□ -0.594e-7■■■■■ 31
SS18L1-203ENST00000450482 FTOQ9C0B1 505 aaKnown RBP eCLIP13.56□□□□□ -0.243e-9■■■■■ 30.4
SS18L1-203ENST00000450482 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.25□□□□□ -0.614e-6■■■■■ 30.2
SS18L1-203ENST00000450482 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.42□□□□□ -0.583e-8■■■■■ 29.4
SS18L1-203ENST00000450482 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.64e-7■■■■■ 29.4
SS18L1-203ENST00000450482 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.92□□□□□ -0.56e-11■■■■■ 29
SS18L1-203ENST00000450482 RBFOX2O43251 390 aaKnown RBP eCLIP8.7□□□□□ -1.027e-16■■■■■ 28.8
SS18L1-203ENST00000450482 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.018e-9■■■■■ 28.6
SS18L1-203ENST00000450482 HNRNPKP61978 463 aaKnown RBP eCLIP11.86□□□□□ -0.516e-7■■■■■ 28.1
SS18L1-203ENST00000450482 AARSP49588 968 aaKnown RBP eCLIP12.71□□□□□ -0.375e-7■■■■■ 27.5
SS18L1-203ENST00000450482 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.92□□□□□ -0.184e-6■■■■□ 26.3
SS18L1-203ENST00000450482 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.88□□□□□ -0.355e-8■■■■□ 25.9
SS18L1-203ENST00000450482 EIF4G2P78344 907 aaKnown RBP eCLIP16.05■□□□□ 0.166e-6■■■■□ 25.1
SS18L1-203ENST00000450482 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.17□□□□□ -0.462e-7■■■■□ 24.8
SS18L1-203ENST00000450482 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.23□□□□□ -0.135e-8■■■■□ 24.6
SS18L1-203ENST00000450482 SF3B4Q15427 424 aaKnown RBP eCLIP10.64□□□□□ -0.711e-8■■■■□ 23.6
SS18L1-203ENST00000450482 EWSR1Q01844 656 aaKnown RBP eCLIP8.65□□□□□ -1.021e-6■■■■□ 23.1
SS18L1-203ENST00000450482 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.37□□□□□ -0.917e-7■■■■□ 22.9
SS18L1-203ENST00000450482 PCBP2Q15366 365 aaKnown RBP eCLIP10.67□□□□□ -0.79e-7■■■■□ 22.8
SS18L1-203ENST00000450482 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.273e-6■■■■□ 22.5
SS18L1-203ENST00000450482 MATR3P43243 847 aaKnown RBP eCLIP12.65□□□□□ -0.388e-7■■■■□ 22.2
SS18L1-203ENST00000450482 EFTUD2Q15029 972 aaKnown RBP eCLIP10.8□□□□□ -0.681e-6■■■■□ 21.6
SS18L1-203ENST00000450482 NONOQ15233 471 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■■■■□ 20.6
SS18L1-203ENST00000450482 FKBP4Q02790 459 aaKnown RBP eCLIP15.41■□□□□ 0.061e-6■■■■□ 20.3
SS18L1-203ENST00000450482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■■□ 20.1
SS18L1-203ENST00000450482 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.02□□□□□ -0.651e-7■■■■□ 19.7
SS18L1-203ENST00000450482 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.85□□□□□ -0.191e-6■■■□□ 19.1
SS18L1-203ENST00000450482 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.37■□□□□ 0.695e-7■■■□□ 18.6
SS18L1-203ENST00000450482 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.35□□□□□ -0.758e-7■■■□□ 18.2
SS18L1-203ENST00000450482 FUSP35637 526 aaKnown RBP eCLIP7.91□□□□□ -1.147e-7■■■□□ 17.1
SS18L1-203ENST00000450482 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.02□□□□□ -0.499e-7■■■□□ 17
SS18L1-203ENST00000450482 CDC40O60508 579 aaKnown RBP eCLIP10.82□□□□□ -0.685e-7■■■□□ 16.9
SS18L1-203ENST00000450482 NKRFO15226 690 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■□□ 16.7
SS18L1-203ENST00000450482 SFPQP23246 707 aaKnown RBP eCLIP13.09□□□□□ -0.313e-7■■■□□ 16.6
SS18L1-203ENST00000450482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.34□□□□□ -0.116e-8■■■□□ 16.3
SS18L1-203ENST00000450482 DDX3XO00571 662 aaKnown RBP eCLIP11.63□□□□□ -0.553e-6■■■□□ 15.8
SS18L1-203ENST00000450482 RBM22Q9NW64 420 aaKnown RBP eCLIP11.54□□□□□ -0.561e-6■■■□□ 15.1
SS18L1-203ENST00000450482 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.83□□□□□ -0.24e-6■■■□□ 14.8
SS18L1-203ENST00000450482 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.78□□□□□ -0.22e-8■■■□□ 14.8
SS18L1-203ENST00000450482 SMNDC1O75940 238 aaKnown RBP eCLIP10.5□□□□□ -0.733e-7■■■□□ 14.7
SS18L1-203ENST00000450482 U2AF2P26368 475 aaKnown RBP eCLIP12.8□□□□□ -0.363e-17■■□□□ 14.2
SS18L1-203ENST00000450482 DDX6P26196 483 aaKnown RBP eCLIP12.55□□□□□ -0.44e-6■■□□□ 13.7
SS18L1-203ENST00000450482 GPKOWQ92917 476 aaPredicted RBP eCLIP13.49□□□□□ -0.258e-6■■□□□ 13.6
SS18L1-203ENST00000450482 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.21□□□□□ -0.943e-6■■□□□ 13.5
SS18L1-203ENST00000450482 SF3A3Q12874 501 aaKnown RBP eCLIP10.13□□□□□ -0.791e-12■■□□□ 12.8
SS18L1-203ENST00000450482 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.61□□□□□ -0.715e-6■■□□□ 12.2
SS18L1-203ENST00000450482 NCBP2P52298 156 aaKnown RBP eCLIP10.48□□□□□ -0.733e-11■■□□□ 11.8
SS18L1-203ENST00000450482 EIF3DO15371 548 aaKnown RBP eCLIP12.45□□□□□ -0.422e-6■■□□□ 11.5
SS18L1-203ENST00000450482 PPIGQ13427 754 aaKnown RBP eCLIP13.77□□□□□ -0.211e-8■□□□□ 10.7
SS18L1-203ENST00000450482 RBM5P52756 815 aaKnown RBP eCLIP14.68□□□□□ -0.063e-11■□□□□ 10.3
SS18L1-203ENST00000450482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.56■□□□□ 0.242e-6■□□□□ 10.1
SS18L1-203ENST00000450482 TROVE2P10155 538 aaKnown RBP eCLIP10.09□□□□□ -0.791e-7■□□□□ 9.3
SS18L1-203ENST00000450482 TIA1P31483 386 aaKnown RBP eCLIP10.51□□□□□ -0.734e-6■□□□□ 8.5
SS18L1-203ENST00000450482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.53e-9■□□□□ 8.4
SS18L1-203ENST00000450482 TAF15Q92804 592 aaKnown RBP eCLIP9.72□□□□□ -0.855e-6■□□□□ 8.3
Retrieved 64 of 64 RNA–protein pairs in 13.4 ms