RNA–Protein interactions for RNA: ENST00000450482.5

SS18L1-203, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 781 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-203ENST00000450482 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
SS18L1-203ENST00000450482 K7ERS5 55 aa4.35□□□□□ -1.71
SS18L1-203ENST00000450482 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
SS18L1-203ENST00000450482 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
SS18L1-203ENST00000450482 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
SS18L1-203ENST00000450482 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
SS18L1-203ENST00000450482 MT1GP13640 62 aa4.23□□□□□ -1.73
SS18L1-203ENST00000450482 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
SS18L1-203ENST00000450482 HMCN1Q96RW7 5635 aa4.22□□□□□ -1.73
SS18L1-203ENST00000450482 ROMO1P60602 79 aa4.21□□□□□ -1.74
SS18L1-203ENST00000450482 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
SS18L1-203ENST00000450482 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
SS18L1-203ENST00000450482 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
SS18L1-203ENST00000450482 MT4P47944 62 aa4.16□□□□□ -1.74
SS18L1-203ENST00000450482 MT1MQ8N339 61 aa4.16□□□□□ -1.74
SS18L1-203ENST00000450482 MT1LQ93083 61 aa4.13□□□□□ -1.75
SS18L1-203ENST00000450482 TNP1P09430 55 aa4.12□□□□□ -1.75
SS18L1-203ENST00000450482 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
SS18L1-203ENST00000450482 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
SS18L1-203ENST00000450482 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
SS18L1-203ENST00000450482 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
SS18L1-203ENST00000450482 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
SS18L1-203ENST00000450482 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
SS18L1-203ENST00000450482 LCE3AQ5TA76 89 aa4.02□□□□□ -1.77
SS18L1-203ENST00000450482 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
SS18L1-203ENST00000450482 PRAC1Q96KF2 57 aa4.02□□□□□ -1.77
SS18L1-203ENST00000450482 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
SS18L1-203ENST00000450482 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
SS18L1-203ENST00000450482 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
SS18L1-203ENST00000450482 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
SS18L1-203ENST00000450482 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
SS18L1-203ENST00000450482 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
SS18L1-203ENST00000450482 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
SS18L1-203ENST00000450482 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
SS18L1-203ENST00000450482 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
SS18L1-203ENST00000450482 SVIPQ8NHG7 77 aa3.76□□□□□ -1.81
SS18L1-203ENST00000450482 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
SS18L1-203ENST00000450482 LOC100996750A0A140TA64 210 aa3.71□□□□□ -1.82
SS18L1-203ENST00000450482 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
SS18L1-203ENST00000450482 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
SS18L1-203ENST00000450482 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
SS18L1-203ENST00000450482 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
SS18L1-203ENST00000450482 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
SS18L1-203ENST00000450482 MT1AP04731 61 aa3.51□□□□□ -1.85
SS18L1-203ENST00000450482 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
SS18L1-203ENST00000450482 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
SS18L1-203ENST00000450482 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
SS18L1-203ENST00000450482 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
SS18L1-203ENST00000450482 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
SS18L1-203ENST00000450482 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
SS18L1-203ENST00000450482 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
SS18L1-203ENST00000450482 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
SS18L1-203ENST00000450482 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
SS18L1-203ENST00000450482 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
SS18L1-203ENST00000450482 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
SS18L1-203ENST00000450482 MT3P25713 68 aa3.21□□□□□ -1.9
SS18L1-203ENST00000450482 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
SS18L1-203ENST00000450482 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
SS18L1-203ENST00000450482 H3BS24 57 aa3.08□□□□□ -1.92
SS18L1-203ENST00000450482 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
SS18L1-203ENST00000450482 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
SS18L1-203ENST00000450482 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
SS18L1-203ENST00000450482 A0A0A0MQY5 61 aa2.81□□□□□ -1.96
SS18L1-203ENST00000450482 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
SS18L1-203ENST00000450482 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
SS18L1-203ENST00000450482 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
SS18L1-203ENST00000450482 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
SS18L1-203ENST00000450482 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
SS18L1-203ENST00000450482 LCE1FQ5T754 118 aa2.54□□□□□ -2
SS18L1-203ENST00000450482 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
SS18L1-203ENST00000450482 INE1O15225 51 aa2.52□□□□□ -2.01
SS18L1-203ENST00000450482 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
SS18L1-203ENST00000450482 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
SS18L1-203ENST00000450482 PRM1P04553 51 aa2.2□□□□□ -2.06
SS18L1-203ENST00000450482 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
SS18L1-203ENST00000450482 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
SS18L1-203ENST00000450482 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
SS18L1-203ENST00000450482 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 7.1 ms