RNA–Protein interactions for RNA: ENST00000450171.2

GRAMD1B-202, Transcript of GRAM domain containing 1B, humanhuman

TSL 2 BASIC

Gene GRAMD1B, Length 2,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-202ENST00000450171 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
GRAMD1B-202ENST00000450171 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
GRAMD1B-202ENST00000450171 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
GRAMD1B-202ENST00000450171 PHF23Q9BUL5 403 aaPredicted RBP24.72■■□□□ 1.55
GRAMD1B-202ENST00000450171 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.33
GRAMD1B-202ENST00000450171 EHMT2Q96KQ7 1210 aa23■■□□□ 1.27
GRAMD1B-202ENST00000450171 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
GRAMD1B-202ENST00000450171 PLPPR3Q6T4P5 718 aa22.91■■□□□ 1.26
GRAMD1B-202ENST00000450171 SHROOM4Q9ULL8 1493 aa22.76■■□□□ 1.23
GRAMD1B-202ENST00000450171 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
GRAMD1B-202ENST00000450171 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
GRAMD1B-202ENST00000450171 KCNA4P22459 653 aa22.3■■□□□ 1.16
GRAMD1B-202ENST00000450171 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
GRAMD1B-202ENST00000450171 ADRA2BP18089 450 aa22.06■■□□□ 1.12
GRAMD1B-202ENST00000450171 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
GRAMD1B-202ENST00000450171 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
GRAMD1B-202ENST00000450171 ABCC9O60706 1549 aa21.81■■□□□ 1.08
GRAMD1B-202ENST00000450171 CSRNP3Q8WYN3 585 aa21.77■■□□□ 1.08
GRAMD1B-202ENST00000450171 SCRIBQ14160 1630 aa21.74■■□□□ 1.07
GRAMD1B-202ENST00000450171 NACADO15069 1562 aa21.66■■□□□ 1.06
GRAMD1B-202ENST00000450171 SLC24A1O60721 1099 aa21.45■■□□□ 1.02
GRAMD1B-202ENST00000450171 PPP6R1Q9UPN7 881 aa21.4■■□□□ 1.02
GRAMD1B-202ENST00000450171 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
GRAMD1B-202ENST00000450171 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
GRAMD1B-202ENST00000450171 SLC4A1APQ9BWU0 796 aaKnown RBP21.26■□□□□ 0.99
GRAMD1B-202ENST00000450171 CECR2Q9BXF3 1484 aa21.21■□□□□ 0.99
GRAMD1B-202ENST00000450171 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
GRAMD1B-202ENST00000450171 UNC13AQ9UPW8 1703 aa21.1■□□□□ 0.97
GRAMD1B-202ENST00000450171 WIZO95785 1651 aa20.99■□□□□ 0.95
GRAMD1B-202ENST00000450171 RTN4Q9NQC3 1192 aaKnown RBP20.96■□□□□ 0.95
GRAMD1B-202ENST00000450171 BAZ1AQ9NRL2 1556 aaPredicted RBP20.94■□□□□ 0.94
GRAMD1B-202ENST00000450171 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
GRAMD1B-202ENST00000450171 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
GRAMD1B-202ENST00000450171 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.91
GRAMD1B-202ENST00000450171 ZBTB22O15209 634 aa20.71■□□□□ 0.91
GRAMD1B-202ENST00000450171 LOC105371045A0A1W2PR82 267 aa20.7■□□□□ 0.91
GRAMD1B-202ENST00000450171 TOP2AP11388 1531 aaKnown RBP20.68■□□□□ 0.9
GRAMD1B-202ENST00000450171 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
GRAMD1B-202ENST00000450171 EIF4G1Q04637 1599 aaKnown RBP20.62■□□□□ 0.89
GRAMD1B-202ENST00000450171 FOXD1Q16676 465 aa20.62■□□□□ 0.89
GRAMD1B-202ENST00000450171 PPP4R3CPQ6ZMV5 832 aa20.58■□□□□ 0.89
GRAMD1B-202ENST00000450171 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
GRAMD1B-202ENST00000450171 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
GRAMD1B-202ENST00000450171 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
GRAMD1B-202ENST00000450171 FAM9AQ8IZU1 332 aaPredicted RBP20.43■□□□□ 0.86
GRAMD1B-202ENST00000450171 ABCC8Q09428 1581 aa20.36■□□□□ 0.85
GRAMD1B-202ENST00000450171 NPM3O75607 178 aaKnown RBP20.34■□□□□ 0.85
GRAMD1B-202ENST00000450171 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
GRAMD1B-202ENST00000450171 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
GRAMD1B-202ENST00000450171 PCGF6Q9BYE7 350 aa20.3■□□□□ 0.84
GRAMD1B-202ENST00000450171 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
GRAMD1B-202ENST00000450171 NCBP3Q53F19 620 aaKnown RBP20.12■□□□□ 0.81
GRAMD1B-202ENST00000450171 HRCP23327 699 aa20.1■□□□□ 0.81
GRAMD1B-202ENST00000450171 SOGA1O94964 1423 aa20.07■□□□□ 0.8
GRAMD1B-202ENST00000450171 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
GRAMD1B-202ENST00000450171 TRIM26Q12899 539 aaPredicted RBP20.05■□□□□ 0.8
GRAMD1B-202ENST00000450171 NCAPD3P42695 1498 aa20.03■□□□□ 0.8
GRAMD1B-202ENST00000450171 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
GRAMD1B-202ENST00000450171 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
GRAMD1B-202ENST00000450171 RUSC2Q8N2Y8 1516 aa20■□□□□ 0.79
GRAMD1B-202ENST00000450171 EEA1Q15075 1411 aa19.96■□□□□ 0.79
GRAMD1B-202ENST00000450171 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
GRAMD1B-202ENST00000450171 TNIKQ9UKE5 1360 aa19.82■□□□□ 0.76
GRAMD1B-202ENST00000450171 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
GRAMD1B-202ENST00000450171 PIAS4Q8N2W9 510 aaPredicted RBP19.78■□□□□ 0.76
GRAMD1B-202ENST00000450171 BIVM-ERCC5R4GMW8 1640 aa19.78■□□□□ 0.76
GRAMD1B-202ENST00000450171 GOLGA3Q08378 1498 aa19.78■□□□□ 0.76
GRAMD1B-202ENST00000450171 CFTRP13569 1480 aa19.76■□□□□ 0.75
GRAMD1B-202ENST00000450171 KIF21BO75037 1637 aa19.74■□□□□ 0.75
GRAMD1B-202ENST00000450171 PPARGC1BQ86YN6 1023 aaKnown RBP19.74■□□□□ 0.75
GRAMD1B-202ENST00000450171 UBTFP17480 764 aaKnown RBP19.72■□□□□ 0.75
GRAMD1B-202ENST00000450171 CEP164Q9UPV0 1460 aa19.72■□□□□ 0.75
GRAMD1B-202ENST00000450171 CC2D2AQ9P2K1 1620 aa19.71■□□□□ 0.75
GRAMD1B-202ENST00000450171 CUX1P39880 1505 aa19.69■□□□□ 0.74
GRAMD1B-202ENST00000450171 PRDM2Q13029 1718 aa19.66■□□□□ 0.74
GRAMD1B-202ENST00000450171 FOXD4L1Q9NU39 408 aa19.65■□□□□ 0.74
GRAMD1B-202ENST00000450171 RAPGEF2Q9Y4G8 1499 aa19.62■□□□□ 0.73
GRAMD1B-202ENST00000450171 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
GRAMD1B-202ENST00000450171 FKBP8Q14318 412 aa19.53■□□□□ 0.72
GRAMD1B-202ENST00000450171 CLIP1P30622 1438 aa19.51■□□□□ 0.71
GRAMD1B-202ENST00000450171 PRXQ9BXM0 1461 aa19.51■□□□□ 0.71
GRAMD1B-202ENST00000450171 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
GRAMD1B-202ENST00000450171 TTBK1Q5TCY1 1321 aaPredicted RBP19.47■□□□□ 0.71
GRAMD1B-202ENST00000450171 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
GRAMD1B-202ENST00000450171 CNKSR2Q8WXI2 1034 aa19.43■□□□□ 0.7
GRAMD1B-202ENST00000450171 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
GRAMD1B-202ENST00000450171 VPS8Q8N3P4 1428 aa19.41■□□□□ 0.7
GRAMD1B-202ENST00000450171 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
GRAMD1B-202ENST00000450171 FGD5Q6ZNL6 1462 aa19.38■□□□□ 0.69
GRAMD1B-202ENST00000450171 RANGAP1P46060 587 aaPredicted RBP19.36■□□□□ 0.69
GRAMD1B-202ENST00000450171 NESP48681 1621 aa19.36■□□□□ 0.69
GRAMD1B-202ENST00000450171 CUX2O14529 1486 aa19.35■□□□□ 0.69
GRAMD1B-202ENST00000450171 PRKCSHP14314 528 aaPredicted RBP19.31■□□□□ 0.68
GRAMD1B-202ENST00000450171 IGF1RP08069 1367 aa19.29■□□□□ 0.68
GRAMD1B-202ENST00000450171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
GRAMD1B-202ENST00000450171 ARAP1Q96P48 1450 aa19.29■□□□□ 0.68
GRAMD1B-202ENST00000450171 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.68
GRAMD1B-202ENST00000450171 LAMC3Q9Y6N6 1575 aa19.24■□□□□ 0.67
GRAMD1B-202ENST00000450171 TOPBP1Q92547 1522 aa19.24■□□□□ 0.67
GRAMD1B-202ENST00000450171 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 1430.9 ms