RNA–Protein interactions for RNA: ENST00000449842.1

LINC01344-202, Transcript of long intergenic non-protein coding RNA 1344, humanhuman

TSL 3 BASIC

Gene LINC01344, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01344-202ENST00000449842 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
LINC01344-202ENST00000449842 AEBP2Q6ZN18 517 aaPredicted RBP17.2■□□□□ 0.34
LINC01344-202ENST00000449842 PHF23Q9BUL5 403 aaPredicted RBP15.3■□□□□ 0.04
LINC01344-202ENST00000449842 SENP3Q9H4L4 574 aaPredicted RBP14.62□□□□□ -0.07
LINC01344-202ENST00000449842 PLPPR3Q6T4P5 718 aa14.42□□□□□ -0.1
LINC01344-202ENST00000449842 NISCHQ9Y2I1 1504 aa13.56□□□□□ -0.24
LINC01344-202ENST00000449842 FOXD1Q16676 465 aa13.42□□□□□ -0.26
LINC01344-202ENST00000449842 ADRA2BP18089 450 aa13.37□□□□□ -0.27
LINC01344-202ENST00000449842 PPP6R1Q9UPN7 881 aa13.3□□□□□ -0.28
LINC01344-202ENST00000449842 KCNA4P22459 653 aa13.03□□□□□ -0.32
LINC01344-202ENST00000449842 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
LINC01344-202ENST00000449842 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
LINC01344-202ENST00000449842 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
LINC01344-202ENST00000449842 NCBP3Q53F19 620 aaKnown RBP12.63□□□□□ -0.39
LINC01344-202ENST00000449842 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
LINC01344-202ENST00000449842 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
LINC01344-202ENST00000449842 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
LINC01344-202ENST00000449842 SCAF1Q9H7N4 1312 aaKnown RBP12.34□□□□□ -0.43
LINC01344-202ENST00000449842 MSH5O43196 834 aa12.31□□□□□ -0.44
LINC01344-202ENST00000449842 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
LINC01344-202ENST00000449842 POTEDQ86YR6 584 aa12.26□□□□□ -0.45
LINC01344-202ENST00000449842 CCDC180Q9P1Z9 1646 aa12.16□□□□□ -0.46
LINC01344-202ENST00000449842 DNAJC5BQ9UF47 199 aa12.01□□□□□ -0.49
LINC01344-202ENST00000449842 ABCC9O60706 1549 aa12□□□□□ -0.49
LINC01344-202ENST00000449842 ZBTB22O15209 634 aa11.96□□□□□ -0.49
LINC01344-202ENST00000449842 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
LINC01344-202ENST00000449842 MAPK8IP2Q13387 824 aaPredicted RBP11.91□□□□□ -0.5
LINC01344-202ENST00000449842 FOXD4L1Q9NU39 408 aa11.9□□□□□ -0.5
LINC01344-202ENST00000449842 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
LINC01344-202ENST00000449842 HOXD11P31277 338 aaPredicted RBP11.71□□□□□ -0.53
LINC01344-202ENST00000449842 RB1CC1Q8TDY2 1594 aa11.56□□□□□ -0.56
LINC01344-202ENST00000449842 SLC4A2P04920 1241 aa11.52□□□□□ -0.57
LINC01344-202ENST00000449842 NACADO15069 1562 aa11.52□□□□□ -0.57
LINC01344-202ENST00000449842 MYCNP04198 464 aaPredicted RBP11.47□□□□□ -0.57
LINC01344-202ENST00000449842 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
LINC01344-202ENST00000449842 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
LINC01344-202ENST00000449842 DCAF8L2P0C7V8 631 aa11.42□□□□□ -0.58
LINC01344-202ENST00000449842 DCAF1Q9Y4B6 1507 aa11.29□□□□□ -0.6
LINC01344-202ENST00000449842 ZCCHC6Q5VYS8 1495 aaKnown RBP11.25□□□□□ -0.61
LINC01344-202ENST00000449842 AMER1Q5JTC6 1135 aaPredicted RBP11.22□□□□□ -0.61
LINC01344-202ENST00000449842 FKBP8Q14318 412 aa11.18□□□□□ -0.62
LINC01344-202ENST00000449842 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC01344-202ENST00000449842 SHROOM4Q9ULL8 1493 aa11.18□□□□□ -0.62
LINC01344-202ENST00000449842 DCAF8L1A6NGE4 600 aa11.17□□□□□ -0.62
LINC01344-202ENST00000449842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
LINC01344-202ENST00000449842 HNRNPUL2Q1KMD3 747 aaKnown RBP11.17□□□□□ -0.62
LINC01344-202ENST00000449842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC01344-202ENST00000449842 SAMD1Q6SPF0 538 aaPredicted RBP11.13□□□□□ -0.63
LINC01344-202ENST00000449842 UNC13AQ9UPW8 1703 aa11.12□□□□□ -0.63
LINC01344-202ENST00000449842 RTN4Q9NQC3 1192 aaKnown RBP11.11□□□□□ -0.63
LINC01344-202ENST00000449842 BICRAQ9NZM4 1560 aa11.08□□□□□ -0.64
LINC01344-202ENST00000449842 ATF5Q9Y2D1 282 aaPredicted RBP11.01□□□□□ -0.65
LINC01344-202ENST00000449842 U3KPZ7 1027 aaPredicted RBP11.01□□□□□ -0.65
LINC01344-202ENST00000449842 SCRIBQ14160 1630 aa10.99□□□□□ -0.65
LINC01344-202ENST00000449842 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
LINC01344-202ENST00000449842 APLP2Q06481 763 aa10.95□□□□□ -0.66
LINC01344-202ENST00000449842 EIF4G1Q04637 1599 aaKnown RBP10.87□□□□□ -0.67
LINC01344-202ENST00000449842 CECR2Q9BXF3 1484 aa10.86□□□□□ -0.67
LINC01344-202ENST00000449842 CC2D2AQ9P2K1 1620 aa10.85□□□□□ -0.67
LINC01344-202ENST00000449842 ZNF219Q9P2Y4 722 aaPredicted RBP10.84□□□□□ -0.67
LINC01344-202ENST00000449842 CACNB1Q02641 598 aaPredicted RBP10.74□□□□□ -0.69
LINC01344-202ENST00000449842 FBXO3Q9UK99 471 aa10.72□□□□□ -0.69
LINC01344-202ENST00000449842 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
LINC01344-202ENST00000449842 FBLN2P98095 1184 aa10.64□□□□□ -0.71
LINC01344-202ENST00000449842 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
LINC01344-202ENST00000449842 MKRN4PQ13434 485 aaPredicted RBP10.59□□□□□ -0.71
LINC01344-202ENST00000449842 SMARCA2P51531 1590 aa10.59□□□□□ -0.71
LINC01344-202ENST00000449842 BAZ1AQ9NRL2 1556 aaPredicted RBP10.57□□□□□ -0.72
LINC01344-202ENST00000449842 PROM2Q8N271 834 aa10.57□□□□□ -0.72
LINC01344-202ENST00000449842 TRHP20396 242 aaPredicted RBP10.56□□□□□ -0.72
LINC01344-202ENST00000449842 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
LINC01344-202ENST00000449842 HMGXB3Q12766 1538 aa10.54□□□□□ -0.72
LINC01344-202ENST00000449842 SMARCA4P51532 1647 aa10.54□□□□□ -0.72
LINC01344-202ENST00000449842 POLA2Q14181 598 aa10.51□□□□□ -0.73
LINC01344-202ENST00000449842 SPINK5Q9NQ38 1064 aaPredicted RBP10.51□□□□□ -0.73
LINC01344-202ENST00000449842 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
LINC01344-202ENST00000449842 RNF39Q9H2S5 420 aa10.5□□□□□ -0.73
LINC01344-202ENST00000449842 CAPN15O75808 1086 aa10.49□□□□□ -0.73
LINC01344-202ENST00000449842 BAZ1BQ9UIG0 1483 aaKnown RBP10.49□□□□□ -0.73
LINC01344-202ENST00000449842 PEG3Q9GZU2 1588 aa10.48□□□□□ -0.73
LINC01344-202ENST00000449842 ZBTB12Q9Y330 459 aaPredicted RBP10.48□□□□□ -0.73
LINC01344-202ENST00000449842 ERCC6Q03468 1493 aa10.45□□□□□ -0.74
LINC01344-202ENST00000449842 C1QBPQ07021 282 aaKnown RBP10.45□□□□□ -0.74
LINC01344-202ENST00000449842 CUX2O14529 1486 aa10.42□□□□□ -0.74
LINC01344-202ENST00000449842 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
LINC01344-202ENST00000449842 LAMC3Q9Y6N6 1575 aa10.36□□□□□ -0.75
LINC01344-202ENST00000449842 PDS5BQ9NTI5 1447 aa10.36□□□□□ -0.75
LINC01344-202ENST00000449842 IFNLR1Q8IU57 520 aaPredicted RBP10.35□□□□□ -0.75
LINC01344-202ENST00000449842 CADPSQ9ULU8 1353 aa10.31□□□□□ -0.76
LINC01344-202ENST00000449842 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
LINC01344-202ENST00000449842 ABCB7O75027 752 aa10.3□□□□□ -0.76
LINC01344-202ENST00000449842 DNAJC5Q9H3Z4 198 aa10.28□□□□□ -0.76
LINC01344-202ENST00000449842 NESP48681 1621 aa10.28□□□□□ -0.76
LINC01344-202ENST00000449842 RSF1Q96T23 1441 aaPredicted RBP10.25□□□□□ -0.77
LINC01344-202ENST00000449842 STAG3Q9UJ98 1225 aa10.24□□□□□ -0.77
LINC01344-202ENST00000449842 WIZO95785 1651 aa10.24□□□□□ -0.77
LINC01344-202ENST00000449842 PKD2Q13563 968 aa10.22□□□□□ -0.77
LINC01344-202ENST00000449842 SPDYE2BA6NHP3 402 aa10.21□□□□□ -0.77
LINC01344-202ENST00000449842 SPDYE6P0CI01 402 aa10.21□□□□□ -0.77
LINC01344-202ENST00000449842 SPDYE2Q495Y8 402 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms