RNA–Protein interactions for RNA: ENST00000445695.1

CBWD4P-201, Transcript of COBW domain containing 4 pseudogene, humanhuman

BASIC

Gene CBWD4P, Length 655 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD4P-201ENST00000445695 AEBP2Q6ZN18 517 aaPredicted RBP20.81■□□□□ 0.92
CBWD4P-201ENST00000445695 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
CBWD4P-201ENST00000445695 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
CBWD4P-201ENST00000445695 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
CBWD4P-201ENST00000445695 FOXD1Q16676 465 aa16.47■□□□□ 0.23
CBWD4P-201ENST00000445695 PLPPR3Q6T4P5 718 aa16.07■□□□□ 0.16
CBWD4P-201ENST00000445695 PPP6R1Q9UPN7 881 aa15.61■□□□□ 0.09
CBWD4P-201ENST00000445695 ADRA2BP18089 450 aa15.56■□□□□ 0.08
CBWD4P-201ENST00000445695 PIAS4Q8N2W9 510 aaPredicted RBP15.42■□□□□ 0.06
CBWD4P-201ENST00000445695 MSH5O43196 834 aa15.29■□□□□ 0.04
CBWD4P-201ENST00000445695 POTEDQ86YR6 584 aa14.5□□□□□ -0.09
CBWD4P-201ENST00000445695 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
CBWD4P-201ENST00000445695 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
CBWD4P-201ENST00000445695 PPP4R3CPQ6ZMV5 832 aa14.13□□□□□ -0.15
CBWD4P-201ENST00000445695 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
CBWD4P-201ENST00000445695 CNKSR2Q8WXI2 1034 aa13.79□□□□□ -0.2
CBWD4P-201ENST00000445695 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
CBWD4P-201ENST00000445695 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
CBWD4P-201ENST00000445695 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
CBWD4P-201ENST00000445695 NPM3O75607 178 aaKnown RBP13.48□□□□□ -0.25
CBWD4P-201ENST00000445695 DCAF8L1A6NGE4 600 aa13.44□□□□□ -0.26
CBWD4P-201ENST00000445695 KCNA4P22459 653 aa13.44□□□□□ -0.26
CBWD4P-201ENST00000445695 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
CBWD4P-201ENST00000445695 RNF39Q9H2S5 420 aa13.09□□□□□ -0.31
CBWD4P-201ENST00000445695 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.33
CBWD4P-201ENST00000445695 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
CBWD4P-201ENST00000445695 C1QBPQ07021 282 aaKnown RBP12.9□□□□□ -0.34
CBWD4P-201ENST00000445695 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
CBWD4P-201ENST00000445695 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
CBWD4P-201ENST00000445695 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
CBWD4P-201ENST00000445695 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
CBWD4P-201ENST00000445695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.46□□□□□ -0.41
CBWD4P-201ENST00000445695 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
CBWD4P-201ENST00000445695 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
CBWD4P-201ENST00000445695 CAPN15O75808 1086 aa12.44□□□□□ -0.42
CBWD4P-201ENST00000445695 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
CBWD4P-201ENST00000445695 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
CBWD4P-201ENST00000445695 ZBTB22O15209 634 aa12.39□□□□□ -0.43
CBWD4P-201ENST00000445695 APLP2Q06481 763 aa12.39□□□□□ -0.43
CBWD4P-201ENST00000445695 DSG3P32926 999 aa12.34□□□□□ -0.43
CBWD4P-201ENST00000445695 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
CBWD4P-201ENST00000445695 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
CBWD4P-201ENST00000445695 ABCB7O75027 752 aa12.18□□□□□ -0.46
CBWD4P-201ENST00000445695 ATF5Q9Y2D1 282 aaPredicted RBP12.17□□□□□ -0.46
CBWD4P-201ENST00000445695 ATXN8OSP0DMR3 200 aa12.05□□□□□ -0.48
CBWD4P-201ENST00000445695 POLA2Q14181 598 aa12.05□□□□□ -0.48
CBWD4P-201ENST00000445695 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
CBWD4P-201ENST00000445695 EHMT2Q96KQ7 1210 aa11.98□□□□□ -0.49
CBWD4P-201ENST00000445695 ZBTB12Q9Y330 459 aaPredicted RBP11.81□□□□□ -0.52
CBWD4P-201ENST00000445695 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
CBWD4P-201ENST00000445695 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
CBWD4P-201ENST00000445695 FBLN2P98095 1184 aa11.63□□□□□ -0.55
CBWD4P-201ENST00000445695 MKRN4PQ13434 485 aaPredicted RBP11.62□□□□□ -0.55
CBWD4P-201ENST00000445695 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
CBWD4P-201ENST00000445695 SPDYE2BA6NHP3 402 aa11.47□□□□□ -0.57
CBWD4P-201ENST00000445695 SPDYE6P0CI01 402 aa11.47□□□□□ -0.57
CBWD4P-201ENST00000445695 SPDYE2Q495Y8 402 aa11.47□□□□□ -0.57
CBWD4P-201ENST00000445695 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
CBWD4P-201ENST00000445695 POTEHQ6S545 545 aa11.41□□□□□ -0.58
CBWD4P-201ENST00000445695 CHRDL2Q6WN34 429 aa11.39□□□□□ -0.59
CBWD4P-201ENST00000445695 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
CBWD4P-201ENST00000445695 SSUH2Q9Y2M2 353 aa11.37□□□□□ -0.59
CBWD4P-201ENST00000445695 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
CBWD4P-201ENST00000445695 PABPN1Q86U42 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
CBWD4P-201ENST00000445695 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
CBWD4P-201ENST00000445695 SPDYE4A6NLX3 237 aa11.18□□□□□ -0.62
CBWD4P-201ENST00000445695 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
CBWD4P-201ENST00000445695 FXR2P51116 673 aaKnown RBP eCLIP11.17□□□□□ -0.62
CBWD4P-201ENST00000445695 CLEC11AQ9Y240 323 aa11.16□□□□□ -0.62
CBWD4P-201ENST00000445695 PRR29P0C7W0 189 aa11.02□□□□□ -0.65
CBWD4P-201ENST00000445695 PRKAR2AP13861 404 aaKnown RBP11.01□□□□□ -0.65
CBWD4P-201ENST00000445695 PROM2Q8N271 834 aa10.97□□□□□ -0.65
CBWD4P-201ENST00000445695 STAG3Q9UJ98 1225 aa10.95□□□□□ -0.66
CBWD4P-201ENST00000445695 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
CBWD4P-201ENST00000445695 HAX1O00165 279 aa10.9□□□□□ -0.66
CBWD4P-201ENST00000445695 FKBP8Q14318 412 aa10.87□□□□□ -0.67
CBWD4P-201ENST00000445695 CREBZFQ9NS37 354 aa10.84□□□□□ -0.67
CBWD4P-201ENST00000445695 EVX2Q03828 476 aa10.82□□□□□ -0.68
CBWD4P-201ENST00000445695 FARP1Q9Y4F1 1045 aaPredicted RBP10.82□□□□□ -0.68
CBWD4P-201ENST00000445695 SP7Q8TDD2 431 aaPredicted RBP10.81□□□□□ -0.68
CBWD4P-201ENST00000445695 C19orf67A6NJJ6 358 aa10.8□□□□□ -0.68
CBWD4P-201ENST00000445695 MNX1P50219 401 aaPredicted RBP10.7□□□□□ -0.7
CBWD4P-201ENST00000445695 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
CBWD4P-201ENST00000445695 NPM1P06748 294 aaKnown RBP eCLIP10.62□□□□□ -0.71
CBWD4P-201ENST00000445695 MIER1Q8N108 512 aa10.62□□□□□ -0.71
CBWD4P-201ENST00000445695 GABBR2O75899 941 aa10.57□□□□□ -0.72
CBWD4P-201ENST00000445695 FBXO3Q9UK99 471 aa10.57□□□□□ -0.72
CBWD4P-201ENST00000445695 PLEKHG5O94827 1062 aa10.56□□□□□ -0.72
CBWD4P-201ENST00000445695 PLCD3Q8N3E9 789 aa10.56□□□□□ -0.72
CBWD4P-201ENST00000445695 ZRANB1Q9UGI0 708 aa10.56□□□□□ -0.72
CBWD4P-201ENST00000445695 ZNF579Q8NAF0 562 aaKnown RBP10.53□□□□□ -0.72
CBWD4P-201ENST00000445695 PAK3O75914 559 aaPredicted RBP10.51□□□□□ -0.73
CBWD4P-201ENST00000445695 CLCN6P51797 869 aa10.48□□□□□ -0.73
CBWD4P-201ENST00000445695 ZBTB47Q9UFB7 747 aaPredicted RBP10.46□□□□□ -0.73
CBWD4P-201ENST00000445695 VASPP50552 380 aaPredicted RBP10.45□□□□□ -0.74
CBWD4P-201ENST00000445695 PHF12Q96QT6 1004 aa10.45□□□□□ -0.74
CBWD4P-201ENST00000445695 TSPYL2Q9H2G4 693 aaPredicted RBP10.45□□□□□ -0.74
CBWD4P-201ENST00000445695 RASEFQ8IZ41 740 aa10.44□□□□□ -0.74
CBWD4P-201ENST00000445695 NUBP1P53384 320 aa10.41□□□□□ -0.74
CBWD4P-201ENST00000445695 CCDC61Q9Y6R9 512 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms