RNA–Protein interactions for RNA: ENST00000445112.1

USP9YP29-201, Transcript of USP9Y pseudogene 29, humanhuman

BASIC

Gene USP9YP29, Length 563 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP29-201ENST00000445112 AEBP2Q6ZN18 517 aaPredicted RBP27.9■■■□□ 2.06
USP9YP29-201ENST00000445112 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
USP9YP29-201ENST00000445112 SENP3Q9H4L4 574 aaPredicted RBP23.77■■□□□ 1.4
USP9YP29-201ENST00000445112 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
USP9YP29-201ENST00000445112 FOXD1Q16676 465 aa22.3■■□□□ 1.16
USP9YP29-201ENST00000445112 POTEDQ86YR6 584 aa21.55■■□□□ 1.04
USP9YP29-201ENST00000445112 MSH5O43196 834 aa21■□□□□ 0.95
USP9YP29-201ENST00000445112 PIAS4Q8N2W9 510 aaPredicted RBP20.63■□□□□ 0.89
USP9YP29-201ENST00000445112 PPP6R1Q9UPN7 881 aa20.46■□□□□ 0.87
USP9YP29-201ENST00000445112 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
USP9YP29-201ENST00000445112 ADRA2BP18089 450 aa20.32■□□□□ 0.84
USP9YP29-201ENST00000445112 MAPK8IP2Q13387 824 aaPredicted RBP18.86■□□□□ 0.61
USP9YP29-201ENST00000445112 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
USP9YP29-201ENST00000445112 SCAF1Q9H7N4 1312 aaKnown RBP18.48■□□□□ 0.55
USP9YP29-201ENST00000445112 CACNB1Q02641 598 aaPredicted RBP18.37■□□□□ 0.53
USP9YP29-201ENST00000445112 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
USP9YP29-201ENST00000445112 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
USP9YP29-201ENST00000445112 HOXD11P31277 338 aaPredicted RBP17.9■□□□□ 0.46
USP9YP29-201ENST00000445112 PPP4R3CPQ6ZMV5 832 aa17.8■□□□□ 0.44
USP9YP29-201ENST00000445112 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
USP9YP29-201ENST00000445112 RNF216Q9NWF9 866 aaPredicted RBP17.58■□□□□ 0.4
USP9YP29-201ENST00000445112 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
USP9YP29-201ENST00000445112 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
USP9YP29-201ENST00000445112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.31
USP9YP29-201ENST00000445112 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
USP9YP29-201ENST00000445112 POTEHQ6S545 545 aa16.74■□□□□ 0.27
USP9YP29-201ENST00000445112 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
USP9YP29-201ENST00000445112 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
USP9YP29-201ENST00000445112 DSG3P32926 999 aa16.6■□□□□ 0.25
USP9YP29-201ENST00000445112 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
USP9YP29-201ENST00000445112 CAPN15O75808 1086 aa16.49■□□□□ 0.23
USP9YP29-201ENST00000445112 SLC4A2P04920 1241 aa16.16■□□□□ 0.18
USP9YP29-201ENST00000445112 ABCB7O75027 752 aa16.09■□□□□ 0.17
USP9YP29-201ENST00000445112 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
USP9YP29-201ENST00000445112 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
USP9YP29-201ENST00000445112 APLP2Q06481 763 aa15.95■□□□□ 0.14
USP9YP29-201ENST00000445112 KCNA4P22459 653 aa15.9■□□□□ 0.14
USP9YP29-201ENST00000445112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
USP9YP29-201ENST00000445112 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
USP9YP29-201ENST00000445112 SAMD1Q6SPF0 538 aaPredicted RBP15.76■□□□□ 0.11
USP9YP29-201ENST00000445112 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
USP9YP29-201ENST00000445112 CHRDL2Q6WN34 429 aa15.7■□□□□ 0.1
USP9YP29-201ENST00000445112 POLA2Q14181 598 aa15.56■□□□□ 0.08
USP9YP29-201ENST00000445112 MYCNP04198 464 aaPredicted RBP15.42■□□□□ 0.06
USP9YP29-201ENST00000445112 SP7Q8TDD2 431 aaPredicted RBP15.42■□□□□ 0.06
USP9YP29-201ENST00000445112 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
USP9YP29-201ENST00000445112 PIP4P2Q8N4L2 257 aa15.23■□□□□ 0.03
USP9YP29-201ENST00000445112 ATF5Q9Y2D1 282 aaPredicted RBP15.22■□□□□ 0.03
USP9YP29-201ENST00000445112 REM2Q8IYK8 340 aaPredicted RBP15.21■□□□□ 0.03
USP9YP29-201ENST00000445112 ZBTB12Q9Y330 459 aaPredicted RBP15.13■□□□□ 0.01
USP9YP29-201ENST00000445112 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
USP9YP29-201ENST00000445112 PITPNM1O00562 1244 aa15.06■□□□□ 0
USP9YP29-201ENST00000445112 HAX1O00165 279 aa15.05■□□□□ -0
USP9YP29-201ENST00000445112 FXR2P51116 673 aaKnown RBP eCLIP15.05■□□□□ -0
USP9YP29-201ENST00000445112 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
USP9YP29-201ENST00000445112 EVX2Q03828 476 aa14.94□□□□□ -0.02
USP9YP29-201ENST00000445112 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
USP9YP29-201ENST00000445112 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
USP9YP29-201ENST00000445112 ZBTB22O15209 634 aa14.66□□□□□ -0.06
USP9YP29-201ENST00000445112 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
USP9YP29-201ENST00000445112 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
USP9YP29-201ENST00000445112 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
USP9YP29-201ENST00000445112 C19orf67A6NJJ6 358 aa14.59□□□□□ -0.07
USP9YP29-201ENST00000445112 ATXN8OSP0DMR3 200 aa14.56□□□□□ -0.08
USP9YP29-201ENST00000445112 SPDYE1Q8NFV5 336 aaPredicted RBP14.53□□□□□ -0.08
USP9YP29-201ENST00000445112 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
USP9YP29-201ENST00000445112 GABBR2O75899 941 aa14.51□□□□□ -0.09
USP9YP29-201ENST00000445112 FBLN2P98095 1184 aa14.51□□□□□ -0.09
USP9YP29-201ENST00000445112 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
USP9YP29-201ENST00000445112 LHX8Q68G74 356 aa14.45□□□□□ -0.1
USP9YP29-201ENST00000445112 SSUH2Q9Y2M2 353 aa14.45□□□□□ -0.1
USP9YP29-201ENST00000445112 ZNF692Q9BU19 519 aaPredicted RBP14.39□□□□□ -0.11
USP9YP29-201ENST00000445112 CHADLQ6NUI6 762 aa14.37□□□□□ -0.11
USP9YP29-201ENST00000445112 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
USP9YP29-201ENST00000445112 PRR29P0C7W0 189 aa14.2□□□□□ -0.14
USP9YP29-201ENST00000445112 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
USP9YP29-201ENST00000445112 CD44P16070 742 aaKnown RBP14.12□□□□□ -0.15
USP9YP29-201ENST00000445112 FARP1Q9Y4F1 1045 aaPredicted RBP14.09□□□□□ -0.15
USP9YP29-201ENST00000445112 CLCN6P51797 869 aa14□□□□□ -0.17
USP9YP29-201ENST00000445112 EHMT2Q96KQ7 1210 aa13.99□□□□□ -0.17
USP9YP29-201ENST00000445112 PLSCR2Q9NRY7 297 aa13.95□□□□□ -0.18
USP9YP29-201ENST00000445112 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
USP9YP29-201ENST00000445112 DCBLD2Q96PD2 775 aa13.92□□□□□ -0.18
USP9YP29-201ENST00000445112 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
USP9YP29-201ENST00000445112 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
USP9YP29-201ENST00000445112 OTUD5Q96G74 571 aa13.81□□□□□ -0.2
USP9YP29-201ENST00000445112 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
USP9YP29-201ENST00000445112 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
USP9YP29-201ENST00000445112 POTEB2H3BUK9 544 aa13.78□□□□□ -0.2
USP9YP29-201ENST00000445112 PHF12Q96QT6 1004 aa13.64□□□□□ -0.23
USP9YP29-201ENST00000445112 POTEMA6NI47 508 aa13.63□□□□□ -0.23
USP9YP29-201ENST00000445112 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
USP9YP29-201ENST00000445112 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
USP9YP29-201ENST00000445112 POTEGQ6S5H5 508 aa13.58□□□□□ -0.24
USP9YP29-201ENST00000445112 MNX1P50219 401 aaPredicted RBP13.53□□□□□ -0.24
USP9YP29-201ENST00000445112 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
USP9YP29-201ENST00000445112 POTEJP0CG39 1038 aa13.51□□□□□ -0.25
USP9YP29-201ENST00000445112 ASTLQ6HA08 431 aaPredicted RBP13.46□□□□□ -0.25
USP9YP29-201ENST00000445112 METRNQ9UJH8 293 aa13.44□□□□□ -0.26
USP9YP29-201ENST00000445112 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms