RNA–Protein interactions for RNA: ENST00000444639.5

KIAA0040-202, Transcript of KIAA0040, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KIAA0040, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA0040-202ENST00000444639 NISCHQ9Y2I1 1504 aa14.66□□□□□ -0.06
KIAA0040-202ENST00000444639 DCAF8L2P0C7V8 631 aa12.58□□□□□ -0.4
KIAA0040-202ENST00000444639 CCDC180Q9P1Z9 1646 aa12.53□□□□□ -0.4
KIAA0040-202ENST00000444639 SHROOM4Q9ULL8 1493 aa12.51□□□□□ -0.41
KIAA0040-202ENST00000444639 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
KIAA0040-202ENST00000444639 ZCCHC6Q5VYS8 1495 aaKnown RBP12.35□□□□□ -0.43
KIAA0040-202ENST00000444639 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.47
KIAA0040-202ENST00000444639 DCAF1Q9Y4B6 1507 aa12.1□□□□□ -0.47
KIAA0040-202ENST00000444639 MYT1Q01538 1121 aa11.94□□□□□ -0.5
KIAA0040-202ENST00000444639 HRCP23327 699 aa11.92□□□□□ -0.5
KIAA0040-202ENST00000444639 CHIC1Q5VXU3 224 aa11.92□□□□□ -0.5
KIAA0040-202ENST00000444639 ZEB1P37275 1124 aaPredicted RBP11.9□□□□□ -0.5
KIAA0040-202ENST00000444639 PCGF6Q9BYE7 350 aa11.86□□□□□ -0.51
KIAA0040-202ENST00000444639 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
KIAA0040-202ENST00000444639 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
KIAA0040-202ENST00000444639 NACADO15069 1562 aa11.72□□□□□ -0.53
KIAA0040-202ENST00000444639 ABCC9O60706 1549 aa11.67□□□□□ -0.54
KIAA0040-202ENST00000444639 SCRIBQ14160 1630 aa11.66□□□□□ -0.54
KIAA0040-202ENST00000444639 CENPBP07199 599 aaPredicted RBP11.63□□□□□ -0.55
KIAA0040-202ENST00000444639 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
KIAA0040-202ENST00000444639 RB1CC1Q8TDY2 1594 aa11.57□□□□□ -0.56
KIAA0040-202ENST00000444639 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
KIAA0040-202ENST00000444639 FAM9AQ8IZU1 332 aaPredicted RBP11.5□□□□□ -0.57
KIAA0040-202ENST00000444639 LOC105371045A0A1W2PR82 267 aa11.46□□□□□ -0.58
KIAA0040-202ENST00000444639 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
KIAA0040-202ENST00000444639 PPARGC1BQ86YN6 1023 aaKnown RBP11.37□□□□□ -0.59
KIAA0040-202ENST00000444639 CCER1Q8TC90 406 aaPredicted RBP11.35□□□□□ -0.59
KIAA0040-202ENST00000444639 APLP2Q06481 763 aa11.34□□□□□ -0.59
KIAA0040-202ENST00000444639 EHMT2Q96KQ7 1210 aa11.32□□□□□ -0.6
KIAA0040-202ENST00000444639 CECR2Q9BXF3 1484 aa11.27□□□□□ -0.6
KIAA0040-202ENST00000444639 UBTFP17480 764 aaKnown RBP11.27□□□□□ -0.61
KIAA0040-202ENST00000444639 EEA1Q15075 1411 aa11.27□□□□□ -0.61
KIAA0040-202ENST00000444639 MROH2BQ7Z745 1585 aa11.26□□□□□ -0.61
KIAA0040-202ENST00000444639 TOP2AP11388 1531 aaKnown RBP11.2□□□□□ -0.62
KIAA0040-202ENST00000444639 PABPN1Q86U42 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
KIAA0040-202ENST00000444639 CSRNP3Q8WYN3 585 aa11.16□□□□□ -0.62
KIAA0040-202ENST00000444639 WIZO95785 1651 aa11.15□□□□□ -0.62
KIAA0040-202ENST00000444639 SMARCA4P51532 1647 aa11.14□□□□□ -0.63
KIAA0040-202ENST00000444639 ACIN1Q9UKV3 1341 aaKnown RBP11.12□□□□□ -0.63
KIAA0040-202ENST00000444639 DIEXFQ68CQ4 756 aaKnown RBP11.1□□□□□ -0.63
KIAA0040-202ENST00000444639 CCDC88BA6NC98 1476 aa11.08□□□□□ -0.64
KIAA0040-202ENST00000444639 TNIKQ9UKE5 1360 aa11.07□□□□□ -0.64
KIAA0040-202ENST00000444639 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
KIAA0040-202ENST00000444639 GOLGA3Q08378 1498 aa11.06□□□□□ -0.64
KIAA0040-202ENST00000444639 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
KIAA0040-202ENST00000444639 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
KIAA0040-202ENST00000444639 GTF3C3Q9Y5Q9 886 aa11.04□□□□□ -0.64
KIAA0040-202ENST00000444639 TTBK1Q5TCY1 1321 aaPredicted RBP11.04□□□□□ -0.64
KIAA0040-202ENST00000444639 YTHDC1Q96MU7 727 aaKnown RBP11.01□□□□□ -0.65
KIAA0040-202ENST00000444639 CEP164Q9UPV0 1460 aa11.01□□□□□ -0.65
KIAA0040-202ENST00000444639 CEP162Q5TB80 1403 aa11□□□□□ -0.65
KIAA0040-202ENST00000444639 CLSPNQ9HAW4 1339 aa10.99□□□□□ -0.65
KIAA0040-202ENST00000444639 NEFLP07196 543 aa10.98□□□□□ -0.65
KIAA0040-202ENST00000444639 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
KIAA0040-202ENST00000444639 SCAF1Q9H7N4 1312 aaKnown RBP10.98□□□□□ -0.65
KIAA0040-202ENST00000444639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.94□□□□□ -0.66
KIAA0040-202ENST00000444639 ATAD2BQ9ULI0 1458 aa10.93□□□□□ -0.66
KIAA0040-202ENST00000444639 ABCC8Q09428 1581 aa10.92□□□□□ -0.66
KIAA0040-202ENST00000444639 CLIP1P30622 1438 aa10.92□□□□□ -0.66
KIAA0040-202ENST00000444639 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
KIAA0040-202ENST00000444639 RANGAP1P46060 587 aaPredicted RBP10.9□□□□□ -0.67
KIAA0040-202ENST00000444639 PEG3Q9GZU2 1588 aa10.89□□□□□ -0.67
KIAA0040-202ENST00000444639 SOGA1O94964 1423 aa10.88□□□□□ -0.67
KIAA0040-202ENST00000444639 KIF27Q86VH2 1401 aa10.85□□□□□ -0.67
KIAA0040-202ENST00000444639 NEUROD1Q13562 356 aa10.84□□□□□ -0.67
KIAA0040-202ENST00000444639 HNRNPUL2Q1KMD3 747 aaKnown RBP10.84□□□□□ -0.67
KIAA0040-202ENST00000444639 EIF4G1Q04637 1599 aaKnown RBP10.82□□□□□ -0.68
KIAA0040-202ENST00000444639 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
KIAA0040-202ENST00000444639 UNC13AQ9UPW8 1703 aa10.82□□□□□ -0.68
KIAA0040-202ENST00000444639 VPS8Q8N3P4 1428 aa10.81□□□□□ -0.68
KIAA0040-202ENST00000444639 KIF21BO75037 1637 aa10.79□□□□□ -0.68
KIAA0040-202ENST00000444639 NCAPD3P42695 1498 aa10.78□□□□□ -0.68
KIAA0040-202ENST00000444639 HMGXB3Q12766 1538 aa10.77□□□□□ -0.69
KIAA0040-202ENST00000444639 ATP1B4Q9UN42 357 aaPredicted RBP10.74□□□□□ -0.69
KIAA0040-202ENST00000444639 ERICH3Q5RHP9 1530 aa10.7□□□□□ -0.7
KIAA0040-202ENST00000444639 TOP2BQ02880 1626 aa10.69□□□□□ -0.7
KIAA0040-202ENST00000444639 RUSC2Q8N2Y8 1516 aa10.68□□□□□ -0.7
KIAA0040-202ENST00000444639 SYNJ1O43426 1573 aa10.68□□□□□ -0.7
KIAA0040-202ENST00000444639 FHAD1B1AJZ9 1412 aa10.66□□□□□ -0.7
KIAA0040-202ENST00000444639 CADPSQ9ULU8 1353 aa10.66□□□□□ -0.7
KIAA0040-202ENST00000444639 RAPGEF2Q9Y4G8 1499 aa10.66□□□□□ -0.7
KIAA0040-202ENST00000444639 MYT1LQ9UL68 1186 aa10.64□□□□□ -0.71
KIAA0040-202ENST00000444639 CFTRP13569 1480 aa10.64□□□□□ -0.71
KIAA0040-202ENST00000444639 CUX2O14529 1486 aa10.63□□□□□ -0.71
KIAA0040-202ENST00000444639 ITGAEP38570 1179 aa10.62□□□□□ -0.71
KIAA0040-202ENST00000444639 CARMIL1Q5VZK9 1371 aa10.62□□□□□ -0.71
KIAA0040-202ENST00000444639 FAM50AQ14320 339 aaKnown RBP10.6□□□□□ -0.71
KIAA0040-202ENST00000444639 BIVM-ERCC5R4GMW8 1640 aa10.6□□□□□ -0.71
KIAA0040-202ENST00000444639 PRXQ9BXM0 1461 aa10.59□□□□□ -0.71
KIAA0040-202ENST00000444639 CCNB3Q8WWL7 1395 aa10.58□□□□□ -0.72
KIAA0040-202ENST00000444639 CDK11AQ9UQ88 783 aaPredicted RBP10.55□□□□□ -0.72
KIAA0040-202ENST00000444639 ANP32EQ9BTT0 268 aa10.55□□□□□ -0.72
KIAA0040-202ENST00000444639 MIER1Q8N108 512 aa10.54□□□□□ -0.72
KIAA0040-202ENST00000444639 TIMELESSQ9UNS1 1208 aa10.53□□□□□ -0.72
KIAA0040-202ENST00000444639 RTL5Q5HYW3 569 aaPredicted RBP10.52□□□□□ -0.73
KIAA0040-202ENST00000444639 PDS5BQ9NTI5 1447 aa10.52□□□□□ -0.73
KIAA0040-202ENST00000444639 CUX1P39880 1505 aa10.52□□□□□ -0.73
KIAA0040-202ENST00000444639 ANP32CO43423 234 aa10.52□□□□□ -0.73
KIAA0040-202ENST00000444639 FANCD2Q9BXW9 1451 aa10.5□□□□□ -0.73
KIAA0040-202ENST00000444639 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms