RNA–Protein interactions for RNA: ENST00000443120.5

ANKRD39-202, Transcript of ankyrin repeat domain 39, humanhuman

TSL 2

Gene ANKRD39, Length 4,965 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD39-202ENST00000443120 DCAF8L2P0C7V8 631 aa25.65■■□□□ 1.7
ANKRD39-202ENST00000443120 PELP1Q8IZL8 1130 aaKnown RBP24.8■■□□□ 1.56
ANKRD39-202ENST00000443120 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
ANKRD39-202ENST00000443120 NISCHQ9Y2I1 1504 aa24.62■■□□□ 1.53
ANKRD39-202ENST00000443120 MYT1Q01538 1121 aa24.54■■□□□ 1.52
ANKRD39-202ENST00000443120 PCGF6Q9BYE7 350 aa24.14■■□□□ 1.45
ANKRD39-202ENST00000443120 CENPBP07199 599 aaPredicted RBP24.05■■□□□ 1.44
ANKRD39-202ENST00000443120 ZEB1P37275 1124 aaPredicted RBP24.05■■□□□ 1.44
ANKRD39-202ENST00000443120 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
ANKRD39-202ENST00000443120 HRCP23327 699 aa23.64■■□□□ 1.38
ANKRD39-202ENST00000443120 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
ANKRD39-202ENST00000443120 ERICH6Q7L0X2 663 aa23.52■■□□□ 1.36
ANKRD39-202ENST00000443120 CCER1Q8TC90 406 aaPredicted RBP23.48■■□□□ 1.35
ANKRD39-202ENST00000443120 APLP2Q06481 763 aa23.38■■□□□ 1.33
ANKRD39-202ENST00000443120 FAM9AQ8IZU1 332 aaPredicted RBP23.21■■□□□ 1.31
ANKRD39-202ENST00000443120 TRIM26Q12899 539 aaPredicted RBP23.19■■□□□ 1.3
ANKRD39-202ENST00000443120 NEFLP07196 543 aa23.07■■□□□ 1.28
ANKRD39-202ENST00000443120 YTHDC1Q96MU7 727 aaKnown RBP23.06■■□□□ 1.28
ANKRD39-202ENST00000443120 TTBK1Q5TCY1 1321 aaPredicted RBP22.98■■□□□ 1.27
ANKRD39-202ENST00000443120 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
ANKRD39-202ENST00000443120 PPARGC1BQ86YN6 1023 aaKnown RBP22.86■■□□□ 1.25
ANKRD39-202ENST00000443120 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
ANKRD39-202ENST00000443120 DIEXFQ68CQ4 756 aaKnown RBP22.52■■□□□ 1.2
ANKRD39-202ENST00000443120 UBTFP17480 764 aaKnown RBP22.47■■□□□ 1.19
ANKRD39-202ENST00000443120 GTF3C3Q9Y5Q9 886 aa22.46■■□□□ 1.19
ANKRD39-202ENST00000443120 LOC105371045A0A1W2PR82 267 aa22.42■■□□□ 1.18
ANKRD39-202ENST00000443120 RANGAP1P46060 587 aaPredicted RBP22.33■■□□□ 1.16
ANKRD39-202ENST00000443120 ACIN1Q9UKV3 1341 aaKnown RBP22.31■■□□□ 1.16
ANKRD39-202ENST00000443120 ATP1B4Q9UN42 357 aaPredicted RBP22.25■■□□□ 1.15
ANKRD39-202ENST00000443120 RTL5Q5HYW3 569 aaPredicted RBP22.21■■□□□ 1.15
ANKRD39-202ENST00000443120 DAXXQ9UER7 740 aaPredicted RBP22.21■■□□□ 1.15
ANKRD39-202ENST00000443120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.19■■□□□ 1.14
ANKRD39-202ENST00000443120 HNRNPUL2Q1KMD3 747 aaKnown RBP22.01■■□□□ 1.11
ANKRD39-202ENST00000443120 CLSPNQ9HAW4 1339 aa21.96■■□□□ 1.11
ANKRD39-202ENST00000443120 ZNF316A6NFI3 1004 aaPredicted RBP21.94■■□□□ 1.1
ANKRD39-202ENST00000443120 CDK11AQ9UQ88 783 aaPredicted RBP21.85■■□□□ 1.09
ANKRD39-202ENST00000443120 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.09
ANKRD39-202ENST00000443120 BCANQ96GW7 911 aa21.81■■□□□ 1.08
ANKRD39-202ENST00000443120 ITGAEP38570 1179 aa21.75■■□□□ 1.07
ANKRD39-202ENST00000443120 DCAF1Q9Y4B6 1507 aa21.74■■□□□ 1.07
ANKRD39-202ENST00000443120 MYT1LQ9UL68 1186 aa21.72■■□□□ 1.07
ANKRD39-202ENST00000443120 NEUROD1Q13562 356 aa21.69■■□□□ 1.06
ANKRD39-202ENST00000443120 ANP32CO43423 234 aa21.59■■□□□ 1.05
ANKRD39-202ENST00000443120 POLR3GLQ9BT43 218 aa21.55■■□□□ 1.04
ANKRD39-202ENST00000443120 ANP32AP39687 249 aaKnown RBP21.48■■□□□ 1.03
ANKRD39-202ENST00000443120 FKBP8Q14318 412 aa21.38■■□□□ 1.01
ANKRD39-202ENST00000443120 CNGB1Q14028 1251 aaPredicted RBP21.34■■□□□ 1.01
ANKRD39-202ENST00000443120 ANP32EQ9BTT0 268 aa21.33■■□□□ 1.01
ANKRD39-202ENST00000443120 EIF5BO60841 1220 aaKnown RBP21.32■■□□□ 1
ANKRD39-202ENST00000443120 ABCC9O60706 1549 aa21.32■■□□□ 1
ANKRD39-202ENST00000443120 GLIPR1L2Q4G1C9 344 aa21.31■■□□□ 1
ANKRD39-202ENST00000443120 PABPN1Q86U42 306 aaKnown RBP eCLIP21.25■□□□□ 0.99
ANKRD39-202ENST00000443120 FAM50AQ14320 339 aaKnown RBP21.21■□□□□ 0.99
ANKRD39-202ENST00000443120 MIER1Q8N108 512 aa21.13■□□□□ 0.97
ANKRD39-202ENST00000443120 NPM2Q86SE8 214 aaKnown RBP21.06■□□□□ 0.96
ANKRD39-202ENST00000443120 ZBTB47Q9UFB7 747 aaPredicted RBP21.06■□□□□ 0.96
ANKRD39-202ENST00000443120 CCDC180Q9P1Z9 1646 aa21.06■□□□□ 0.96
ANKRD39-202ENST00000443120 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
ANKRD39-202ENST00000443120 NBR1Q14596 966 aa21.03■□□□□ 0.96
ANKRD39-202ENST00000443120 BCL11AQ9H165 835 aa21.01■□□□□ 0.95
ANKRD39-202ENST00000443120 HNRNPUQ00839 825 aaKnown RBP eCLIP21■□□□□ 0.95
ANKRD39-202ENST00000443120 CSRNP3Q8WYN3 585 aa20.97■□□□□ 0.95
ANKRD39-202ENST00000443120 DDX10Q13206 875 aaKnown RBP20.92■□□□□ 0.94
ANKRD39-202ENST00000443120 MYO15BQ96JP2 1530 aa20.91■□□□□ 0.94
ANKRD39-202ENST00000443120 ANP32BQ92688 251 aaKnown RBP20.89■□□□□ 0.93
ANKRD39-202ENST00000443120 CCDC136Q96JN2 1154 aa20.87■□□□□ 0.93
ANKRD39-202ENST00000443120 SLC4A1APQ9BWU0 796 aaKnown RBP20.87■□□□□ 0.93
ANKRD39-202ENST00000443120 FBLN2P98095 1184 aa20.81■□□□□ 0.92
ANKRD39-202ENST00000443120 CANXP27824 592 aaKnown RBP20.8■□□□□ 0.92
ANKRD39-202ENST00000443120 TONSLQ96HA7 1378 aa20.79■□□□□ 0.92
ANKRD39-202ENST00000443120 SUPT16HQ9Y5B9 1047 aaKnown RBP20.78■□□□□ 0.92
ANKRD39-202ENST00000443120 ZNF326Q5BKZ1 582 aaKnown RBP20.76■□□□□ 0.91
ANKRD39-202ENST00000443120 UPF2Q9HAU5 1272 aaKnown RBP20.75■□□□□ 0.91
ANKRD39-202ENST00000443120 FAM9BQ8IZU0 186 aa20.73■□□□□ 0.91
ANKRD39-202ENST00000443120 DDRGK1Q96HY6 314 aa20.68■□□□□ 0.9
ANKRD39-202ENST00000443120 PPM1GO15355 546 aaPredicted RBP20.64■□□□□ 0.89
ANKRD39-202ENST00000443120 IRX6P78412 446 aaPredicted RBP20.64■□□□□ 0.89
ANKRD39-202ENST00000443120 ERICH6BQ5W0A0 696 aa20.61■□□□□ 0.89
ANKRD39-202ENST00000443120 MRS2Q9HD23 443 aa20.6■□□□□ 0.89
ANKRD39-202ENST00000443120 NOP58Q9Y2X3 529 aaKnown RBP20.59■□□□□ 0.89
ANKRD39-202ENST00000443120 HSP90AA1P07900 732 aaKnown RBP20.58■□□□□ 0.89
ANKRD39-202ENST00000443120 NEFMP07197 916 aa20.58■□□□□ 0.88
ANKRD39-202ENST00000443120 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
ANKRD39-202ENST00000443120 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.55■□□□□ 0.88
ANKRD39-202ENST00000443120 PPP4R2Q9NY27 417 aa20.54■□□□□ 0.88
ANKRD39-202ENST00000443120 DEKP35659 375 aaKnown RBP20.54■□□□□ 0.88
ANKRD39-202ENST00000443120 TMC1Q8TDI8 760 aa20.52■□□□□ 0.88
ANKRD39-202ENST00000443120 RBM19Q9Y4C8 960 aaKnown RBP20.52■□□□□ 0.88
ANKRD39-202ENST00000443120 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
ANKRD39-202ENST00000443120 BECN1Q14457 450 aa20.46■□□□□ 0.87
ANKRD39-202ENST00000443120 TRIM44Q96DX7 344 aaPredicted RBP20.44■□□□□ 0.86
ANKRD39-202ENST00000443120 RTN4Q9NQC3 1192 aaKnown RBP20.44■□□□□ 0.86
ANKRD39-202ENST00000443120 TSHZ2Q9NRE2 1034 aa20.44■□□□□ 0.86
ANKRD39-202ENST00000443120 ARXQ96QS3 562 aa20.43■□□□□ 0.86
ANKRD39-202ENST00000443120 SCRIBQ14160 1630 aa20.42■□□□□ 0.86
ANKRD39-202ENST00000443120 ARID3CA6NKF2 412 aa20.39■□□□□ 0.85
ANKRD39-202ENST00000443120 CEP162Q5TB80 1403 aa20.38■□□□□ 0.85
ANKRD39-202ENST00000443120 TNNT2P45379 298 aaPredicted RBP20.37■□□□□ 0.85
ANKRD39-202ENST00000443120 CLIP1P30622 1438 aa20.37■□□□□ 0.85
ANKRD39-202ENST00000443120 EIF4G2P78344 907 aaKnown RBP eCLIP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms