RNA–Protein interactions for RNA: ENST00000442341.5

RPL35A-204, Transcript of ribosomal protein L35a, humanhuman

TSL 3

Gene RPL35A, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-204ENST00000442341 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
RPL35A-204ENST00000442341 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
RPL35A-204ENST00000442341 SENP3Q9H4L4 574 aaPredicted RBP14.56□□□□□ -0.08
RPL35A-204ENST00000442341 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
RPL35A-204ENST00000442341 FOXD1Q16676 465 aa13.66□□□□□ -0.22
RPL35A-204ENST00000442341 PLPPR3Q6T4P5 718 aa13.22□□□□□ -0.29
RPL35A-204ENST00000442341 PPP6R1Q9UPN7 881 aa12.83□□□□□ -0.36
RPL35A-204ENST00000442341 ADRA2BP18089 450 aa12.79□□□□□ -0.36
RPL35A-204ENST00000442341 PIAS4Q8N2W9 510 aaPredicted RBP12.75□□□□□ -0.37
RPL35A-204ENST00000442341 MSH5O43196 834 aa12.68□□□□□ -0.38
RPL35A-204ENST00000442341 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
RPL35A-204ENST00000442341 MAPK8IP2Q13387 824 aaPredicted RBP11.78□□□□□ -0.52
RPL35A-204ENST00000442341 PPP4R3CPQ6ZMV5 832 aa11.77□□□□□ -0.53
RPL35A-204ENST00000442341 KCNA4P22459 653 aa11.75□□□□□ -0.53
RPL35A-204ENST00000442341 DMRT2Q9Y5R5 561 aa11.57□□□□□ -0.56
RPL35A-204ENST00000442341 SCAF1Q9H7N4 1312 aaKnown RBP11.53□□□□□ -0.56
RPL35A-204ENST00000442341 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
RPL35A-204ENST00000442341 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
RPL35A-204ENST00000442341 NCBP3Q53F19 620 aaKnown RBP11.31□□□□□ -0.6
RPL35A-204ENST00000442341 DCAF8L1A6NGE4 600 aa11.19□□□□□ -0.62
RPL35A-204ENST00000442341 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
RPL35A-204ENST00000442341 SLC4A1APQ9BWU0 796 aaKnown RBP11.1□□□□□ -0.63
RPL35A-204ENST00000442341 RNF216Q9NWF9 866 aaPredicted RBP11.07□□□□□ -0.64
RPL35A-204ENST00000442341 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
RPL35A-204ENST00000442341 CACNB1Q02641 598 aaPredicted RBP10.97□□□□□ -0.65
RPL35A-204ENST00000442341 ZBTB22O15209 634 aa10.91□□□□□ -0.66
RPL35A-204ENST00000442341 NISCHQ9Y2I1 1504 aa10.9□□□□□ -0.66
RPL35A-204ENST00000442341 CSRNP3Q8WYN3 585 aa10.87□□□□□ -0.67
RPL35A-204ENST00000442341 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
RPL35A-204ENST00000442341 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
RPL35A-204ENST00000442341 SLC4A2P04920 1241 aa10.77□□□□□ -0.69
RPL35A-204ENST00000442341 C1QBPQ07021 282 aaKnown RBP10.66□□□□□ -0.7
RPL35A-204ENST00000442341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.66□□□□□ -0.73e-6■□□□□ 8.6
RPL35A-204ENST00000442341 FOXD4L1Q9NU39 408 aa10.63□□□□□ -0.71
RPL35A-204ENST00000442341 ABCC9O60706 1549 aa10.44□□□□□ -0.74
RPL35A-204ENST00000442341 U3KPZ7 1027 aaPredicted RBP10.44□□□□□ -0.74
RPL35A-204ENST00000442341 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
RPL35A-204ENST00000442341 SPINK5Q9NQ38 1064 aaPredicted RBP10.34□□□□□ -0.75
RPL35A-204ENST00000442341 ATF5Q9Y2D1 282 aaPredicted RBP10.34□□□□□ -0.75
RPL35A-204ENST00000442341 CAPN15O75808 1086 aa10.28□□□□□ -0.76
RPL35A-204ENST00000442341 DSG3P32926 999 aa10.2□□□□□ -0.78
RPL35A-204ENST00000442341 ATXN8OSP0DMR3 200 aa10.15□□□□□ -0.78
RPL35A-204ENST00000442341 TRHP20396 242 aaPredicted RBP10.14□□□□□ -0.79
RPL35A-204ENST00000442341 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
RPL35A-204ENST00000442341 ABCB7O75027 752 aa10.1□□□□□ -0.79
RPL35A-204ENST00000442341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.06□□□□□ -0.8
RPL35A-204ENST00000442341 HNRNPUL2Q1KMD3 747 aaKnown RBP10.06□□□□□ -0.8
RPL35A-204ENST00000442341 APLP2Q06481 763 aa9.99□□□□□ -0.81
RPL35A-204ENST00000442341 ZNF219Q9P2Y4 722 aaPredicted RBP9.99□□□□□ -0.81
RPL35A-204ENST00000442341 CCDC180Q9P1Z9 1646 aa9.9□□□□□ -0.82
RPL35A-204ENST00000442341 MKRN4PQ13434 485 aaPredicted RBP9.86□□□□□ -0.83
RPL35A-204ENST00000442341 POLA2Q14181 598 aa9.86□□□□□ -0.83
RPL35A-204ENST00000442341 POTEHQ6S545 545 aa9.77□□□□□ -0.85
RPL35A-204ENST00000442341 DNAJC5Q9H3Z4 198 aa9.76□□□□□ -0.85
RPL35A-204ENST00000442341 FKBP8Q14318 412 aa9.75□□□□□ -0.85
RPL35A-204ENST00000442341 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
RPL35A-204ENST00000442341 RB1CC1Q8TDY2 1594 aa9.69□□□□□ -0.86
RPL35A-204ENST00000442341 RBM42Q9BTD8 480 aaKnown RBP9.63□□□□□ -0.87
RPL35A-204ENST00000442341 FBLN2P98095 1184 aa9.58□□□□□ -0.88
RPL35A-204ENST00000442341 OSCARQ8IYS5 282 aa9.56□□□□□ -0.88
RPL35A-204ENST00000442341 SPDYE4A6NLX3 237 aa9.55□□□□□ -0.88
RPL35A-204ENST00000442341 NACADO15069 1562 aa9.52□□□□□ -0.89
RPL35A-204ENST00000442341 CHRDL2Q6WN34 429 aa9.51□□□□□ -0.89
RPL35A-204ENST00000442341 ZBTB12Q9Y330 459 aaPredicted RBP9.5□□□□□ -0.89
RPL35A-204ENST00000442341 DCAF8L2P0C7V8 631 aa9.48□□□□□ -0.89
RPL35A-204ENST00000442341 PROM2Q8N271 834 aa9.46□□□□□ -0.9
RPL35A-204ENST00000442341 CECR2Q9BXF3 1484 aa9.46□□□□□ -0.9
RPL35A-204ENST00000442341 AKT1S1Q96B36 256 aa9.45□□□□□ -0.9
RPL35A-204ENST00000442341 BICRAQ9NZM4 1560 aa9.45□□□□□ -0.9
RPL35A-204ENST00000442341 UNC13AQ9UPW8 1703 aa9.42□□□□□ -0.9
RPL35A-204ENST00000442341 REM2Q8IYK8 340 aaPredicted RBP9.42□□□□□ -0.9
RPL35A-204ENST00000442341 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
RPL35A-204ENST00000442341 ZNF692Q9BU19 519 aaPredicted RBP9.38□□□□□ -0.91
RPL35A-204ENST00000442341 CC2D2AQ9P2K1 1620 aa9.38□□□□□ -0.91
RPL35A-204ENST00000442341 SPDYE2BA6NHP3 402 aa9.35□□□□□ -0.91
RPL35A-204ENST00000442341 SPDYE6P0CI01 402 aa9.35□□□□□ -0.91
RPL35A-204ENST00000442341 SPDYE2Q495Y8 402 aa9.35□□□□□ -0.91
RPL35A-204ENST00000442341 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
RPL35A-204ENST00000442341 PIP4P2Q8N4L2 257 aa9.31□□□□□ -0.92
RPL35A-204ENST00000442341 MYO15BQ96JP2 1530 aa9.24□□□□□ -0.93
RPL35A-204ENST00000442341 EIF4G1Q04637 1599 aaKnown RBP9.24□□□□□ -0.93
RPL35A-204ENST00000442341 SHROOM4Q9ULL8 1493 aa9.23□□□□□ -0.93
RPL35A-204ENST00000442341 FXR2P51116 673 aaKnown RBP eCLIP9.22□□□□□ -0.93
RPL35A-204ENST00000442341 VASPP50552 380 aaPredicted RBP9.2□□□□□ -0.94
RPL35A-204ENST00000442341 RTN4Q9NQC3 1192 aaKnown RBP9.2□□□□□ -0.94
RPL35A-204ENST00000442341 CLEC11AQ9Y240 323 aa9.19□□□□□ -0.94
RPL35A-204ENST00000442341 CUX2O14529 1486 aa9.16□□□□□ -0.94
RPL35A-204ENST00000442341 IFNLR1Q8IU57 520 aaPredicted RBP9.16□□□□□ -0.94
RPL35A-204ENST00000442341 HAX1O00165 279 aa9.15□□□□□ -0.94
RPL35A-204ENST00000442341 FBXO3Q9UK99 471 aa9.15□□□□□ -0.94
RPL35A-204ENST00000442341 SP7Q8TDD2 431 aaPredicted RBP9.14□□□□□ -0.95
RPL35A-204ENST00000442341 TRIM41Q8WV44 630 aa9.13□□□□□ -0.95
RPL35A-204ENST00000442341 EVX2Q03828 476 aa9.11□□□□□ -0.95
RPL35A-204ENST00000442341 SPDYE1Q8NFV5 336 aaPredicted RBP9.11□□□□□ -0.95
RPL35A-204ENST00000442341 PRKAR2AP13861 404 aaKnown RBP9.09□□□□□ -0.95
RPL35A-204ENST00000442341 CHADLQ6NUI6 762 aa9.06□□□□□ -0.96
RPL35A-204ENST00000442341 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
RPL35A-204ENST00000442341 ERCC6Q03468 1493 aa9.03□□□□□ -0.96
RPL35A-204ENST00000442341 STAG3Q9UJ98 1225 aa9.03□□□□□ -0.96
RPL35A-204ENST00000442341 MIER1Q8N108 512 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms