RNA–Protein interactions for RNA: ENST00000442225.5

MDH1-207, Transcript of malate dehydrogenase 1, humanhuman

TSL 5

Gene MDH1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-207ENST00000442225 AEBP2Q6ZN18 517 aaPredicted RBP22.66■■□□□ 1.22
MDH1-207ENST00000442225 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
MDH1-207ENST00000442225 SENP3Q9H4L4 574 aaPredicted RBP19.37■□□□□ 0.69
MDH1-207ENST00000442225 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
MDH1-207ENST00000442225 FOXD1Q16676 465 aa17.99■□□□□ 0.47
MDH1-207ENST00000442225 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
MDH1-207ENST00000442225 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
MDH1-207ENST00000442225 MSH5O43196 834 aa16.84■□□□□ 0.29
MDH1-207ENST00000442225 ADRA2BP18089 450 aa16.84■□□□□ 0.29
MDH1-207ENST00000442225 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
MDH1-207ENST00000442225 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
MDH1-207ENST00000442225 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
MDH1-207ENST00000442225 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
MDH1-207ENST00000442225 DMRT2Q9Y5R5 561 aa15.38■□□□□ 0.05
MDH1-207ENST00000442225 PPP4R3CPQ6ZMV5 832 aa15.25■□□□□ 0.03
MDH1-207ENST00000442225 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
MDH1-207ENST00000442225 HOXD11P31277 338 aaPredicted RBP14.89□□□□□ -0.03
MDH1-207ENST00000442225 RNF216Q9NWF9 866 aaPredicted RBP14.82□□□□□ -0.04
MDH1-207ENST00000442225 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
MDH1-207ENST00000442225 DCAF8L1A6NGE4 600 aa14.63□□□□□ -0.07
MDH1-207ENST00000442225 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
MDH1-207ENST00000442225 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
MDH1-207ENST00000442225 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
MDH1-207ENST00000442225 KCNA4P22459 653 aa14.31□□□□□ -0.12
MDH1-207ENST00000442225 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
MDH1-207ENST00000442225 C1QBPQ07021 282 aaKnown RBP14.2□□□□□ -0.14
MDH1-207ENST00000442225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.13□□□□□ -0.15
MDH1-207ENST00000442225 U3KPZ7 1027 aaPredicted RBP13.85□□□□□ -0.19
MDH1-207ENST00000442225 SLC4A2P04920 1241 aa13.8□□□□□ -0.2
MDH1-207ENST00000442225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.59□□□□□ -0.23
MDH1-207ENST00000442225 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
MDH1-207ENST00000442225 APLP2Q06481 763 aa13.57□□□□□ -0.24
MDH1-207ENST00000442225 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
MDH1-207ENST00000442225 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
MDH1-207ENST00000442225 CAPN15O75808 1086 aa13.55□□□□□ -0.24
MDH1-207ENST00000442225 SAMD1Q6SPF0 538 aaPredicted RBP13.5□□□□□ -0.25
MDH1-207ENST00000442225 DSG3P32926 999 aa13.48□□□□□ -0.25
MDH1-207ENST00000442225 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
MDH1-207ENST00000442225 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
MDH1-207ENST00000442225 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
MDH1-207ENST00000442225 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
MDH1-207ENST00000442225 ABCB7O75027 752 aa13.22□□□□□ -0.29
MDH1-207ENST00000442225 ZBTB22O15209 634 aa13.15□□□□□ -0.3
MDH1-207ENST00000442225 POLA2Q14181 598 aa13.06□□□□□ -0.32
MDH1-207ENST00000442225 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
MDH1-207ENST00000442225 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
MDH1-207ENST00000442225 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
MDH1-207ENST00000442225 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
MDH1-207ENST00000442225 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
MDH1-207ENST00000442225 POTEHQ6S545 545 aa12.68□□□□□ -0.38
MDH1-207ENST00000442225 AKT1S1Q96B36 256 aa12.63□□□□□ -0.39
MDH1-207ENST00000442225 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
MDH1-207ENST00000442225 FBLN2P98095 1184 aa12.58□□□□□ -0.4
MDH1-207ENST00000442225 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
MDH1-207ENST00000442225 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.41
MDH1-207ENST00000442225 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
MDH1-207ENST00000442225 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
MDH1-207ENST00000442225 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
MDH1-207ENST00000442225 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
MDH1-207ENST00000442225 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
MDH1-207ENST00000442225 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
MDH1-207ENST00000442225 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
MDH1-207ENST00000442225 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
MDH1-207ENST00000442225 PIP4P2Q8N4L2 257 aa12.24□□□□□ -0.45
MDH1-207ENST00000442225 FXR2P51116 673 aaKnown RBP eCLIP12.23□□□□□ -0.45
MDH1-207ENST00000442225 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
MDH1-207ENST00000442225 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
MDH1-207ENST00000442225 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
MDH1-207ENST00000442225 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
MDH1-207ENST00000442225 NISCHQ9Y2I1 1504 aa11.98□□□□□ -0.49
MDH1-207ENST00000442225 PRR29P0C7W0 189 aa11.98□□□□□ -0.49
MDH1-207ENST00000442225 SPDYE4A6NLX3 237 aa11.97□□□□□ -0.49
MDH1-207ENST00000442225 SP7Q8TDD2 431 aaPredicted RBP11.97□□□□□ -0.49
MDH1-207ENST00000442225 HAX1O00165 279 aa11.96□□□□□ -0.49
MDH1-207ENST00000442225 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
MDH1-207ENST00000442225 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
MDH1-207ENST00000442225 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
MDH1-207ENST00000442225 EVX2Q03828 476 aa11.8□□□□□ -0.52
MDH1-207ENST00000442225 PROM2Q8N271 834 aa11.77□□□□□ -0.53
MDH1-207ENST00000442225 FARP1Q9Y4F1 1045 aaPredicted RBP11.76□□□□□ -0.53
MDH1-207ENST00000442225 CREBZFQ9NS37 354 aa11.71□□□□□ -0.53
MDH1-207ENST00000442225 ABCC9O60706 1549 aa11.65□□□□□ -0.54
MDH1-207ENST00000442225 CD44P16070 742 aaKnown RBP11.63□□□□□ -0.55
MDH1-207ENST00000442225 GABBR2O75899 941 aa11.59□□□□□ -0.55
MDH1-207ENST00000442225 CLCN6P51797 869 aa11.59□□□□□ -0.55
MDH1-207ENST00000442225 MNX1P50219 401 aaPredicted RBP11.55□□□□□ -0.56
MDH1-207ENST00000442225 NPM1P06748 294 aaKnown RBP eCLIP11.54□□□□□ -0.56
MDH1-207ENST00000442225 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
MDH1-207ENST00000442225 ZRANB1Q9UGI0 708 aa11.48□□□□□ -0.57
MDH1-207ENST00000442225 FKBP8Q14318 412 aa11.47□□□□□ -0.57
MDH1-207ENST00000442225 PAK3O75914 559 aaPredicted RBP11.45□□□□□ -0.58
MDH1-207ENST00000442225 PLEKHG5O94827 1062 aa11.42□□□□□ -0.58
MDH1-207ENST00000442225 MIER1Q8N108 512 aa11.39□□□□□ -0.59
MDH1-207ENST00000442225 POTEIP0CG38 1075 aa11.33□□□□□ -0.6
MDH1-207ENST00000442225 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
MDH1-207ENST00000442225 DCBLD2Q96PD2 775 aa11.31□□□□□ -0.6
MDH1-207ENST00000442225 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
MDH1-207ENST00000442225 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
MDH1-207ENST00000442225 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
MDH1-207ENST00000442225 GALR2O43603 387 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms