RNA–Protein interactions for RNA: ENST00000440683.1

AC002542.1-201, humanhuman

BASIC

Gene AC002542.1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002542.1-201ENST00000440683 AEBP2Q6ZN18 517 aaPredicted RBP24.35■■□□□ 1.49
AC002542.1-201ENST00000440683 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
AC002542.1-201ENST00000440683 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
AC002542.1-201ENST00000440683 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
AC002542.1-201ENST00000440683 FOXD1Q16676 465 aa19.58■□□□□ 0.72
AC002542.1-201ENST00000440683 POTEDQ86YR6 584 aa19.42■□□□□ 0.7
AC002542.1-201ENST00000440683 MSH5O43196 834 aa18.71■□□□□ 0.59
AC002542.1-201ENST00000440683 PIAS4Q8N2W9 510 aaPredicted RBP18.12■□□□□ 0.49
AC002542.1-201ENST00000440683 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
AC002542.1-201ENST00000440683 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
AC002542.1-201ENST00000440683 ADRA2BP18089 450 aa17.6■□□□□ 0.41
AC002542.1-201ENST00000440683 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
AC002542.1-201ENST00000440683 CACNB1Q02641 598 aaPredicted RBP16.45■□□□□ 0.22
AC002542.1-201ENST00000440683 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
AC002542.1-201ENST00000440683 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
AC002542.1-201ENST00000440683 RNF39Q9H2S5 420 aa15.85■□□□□ 0.13
AC002542.1-201ENST00000440683 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
AC002542.1-201ENST00000440683 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
AC002542.1-201ENST00000440683 C1QBPQ07021 282 aaKnown RBP15.63■□□□□ 0.09
AC002542.1-201ENST00000440683 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
AC002542.1-201ENST00000440683 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
AC002542.1-201ENST00000440683 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
AC002542.1-201ENST00000440683 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
AC002542.1-201ENST00000440683 POTEHQ6S545 545 aa15.1■□□□□ 0.01
AC002542.1-201ENST00000440683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.03
AC002542.1-201ENST00000440683 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
AC002542.1-201ENST00000440683 DSG3P32926 999 aa14.58□□□□□ -0.08
AC002542.1-201ENST00000440683 KCNA4P22459 653 aa14.56□□□□□ -0.08
AC002542.1-201ENST00000440683 CAPN15O75808 1086 aa14.47□□□□□ -0.09
AC002542.1-201ENST00000440683 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
AC002542.1-201ENST00000440683 SPINK5Q9NQ38 1064 aaPredicted RBP14.42□□□□□ -0.1
AC002542.1-201ENST00000440683 NPM3O75607 178 aaKnown RBP14.29□□□□□ -0.12
AC002542.1-201ENST00000440683 APLP2Q06481 763 aa14.1□□□□□ -0.15
AC002542.1-201ENST00000440683 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
AC002542.1-201ENST00000440683 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
AC002542.1-201ENST00000440683 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
AC002542.1-201ENST00000440683 ABCB7O75027 752 aa14.01□□□□□ -0.17
AC002542.1-201ENST00000440683 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
AC002542.1-201ENST00000440683 CHRDL2Q6WN34 429 aa13.93□□□□□ -0.18
AC002542.1-201ENST00000440683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
AC002542.1-201ENST00000440683 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
AC002542.1-201ENST00000440683 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
AC002542.1-201ENST00000440683 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
AC002542.1-201ENST00000440683 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
AC002542.1-201ENST00000440683 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
AC002542.1-201ENST00000440683 SAMD1Q6SPF0 538 aaPredicted RBP13.75□□□□□ -0.21
AC002542.1-201ENST00000440683 POLA2Q14181 598 aa13.51□□□□□ -0.25
AC002542.1-201ENST00000440683 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
AC002542.1-201ENST00000440683 ZBTB22O15209 634 aa13.5□□□□□ -0.25
AC002542.1-201ENST00000440683 PIP4P2Q8N4L2 257 aa13.41□□□□□ -0.26
AC002542.1-201ENST00000440683 HAX1O00165 279 aa13.38□□□□□ -0.27
AC002542.1-201ENST00000440683 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
AC002542.1-201ENST00000440683 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
AC002542.1-201ENST00000440683 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
AC002542.1-201ENST00000440683 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
AC002542.1-201ENST00000440683 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
AC002542.1-201ENST00000440683 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
AC002542.1-201ENST00000440683 EVX2Q03828 476 aa13.09□□□□□ -0.31
AC002542.1-201ENST00000440683 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
AC002542.1-201ENST00000440683 LHX8Q68G74 356 aa12.94□□□□□ -0.34
AC002542.1-201ENST00000440683 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
AC002542.1-201ENST00000440683 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
AC002542.1-201ENST00000440683 GABBR2O75899 941 aa12.83□□□□□ -0.36
AC002542.1-201ENST00000440683 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
AC002542.1-201ENST00000440683 SPDYE2BA6NHP3 402 aa12.78□□□□□ -0.36
AC002542.1-201ENST00000440683 SPDYE6P0CI01 402 aa12.78□□□□□ -0.36
AC002542.1-201ENST00000440683 SPDYE2Q495Y8 402 aa12.78□□□□□ -0.36
AC002542.1-201ENST00000440683 SPDYE1Q8NFV5 336 aaPredicted RBP12.73□□□□□ -0.37
AC002542.1-201ENST00000440683 PLSCR2Q9NRY7 297 aa12.68□□□□□ -0.38
AC002542.1-201ENST00000440683 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
AC002542.1-201ENST00000440683 FBLN2P98095 1184 aa12.6□□□□□ -0.39
AC002542.1-201ENST00000440683 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
AC002542.1-201ENST00000440683 CLCN6P51797 869 aa12.52□□□□□ -0.41
AC002542.1-201ENST00000440683 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
AC002542.1-201ENST00000440683 SSUH2Q9Y2M2 353 aa12.5□□□□□ -0.41
AC002542.1-201ENST00000440683 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
AC002542.1-201ENST00000440683 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
AC002542.1-201ENST00000440683 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
AC002542.1-201ENST00000440683 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
AC002542.1-201ENST00000440683 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
AC002542.1-201ENST00000440683 MKRN4PQ13434 485 aaPredicted RBP12.33□□□□□ -0.44
AC002542.1-201ENST00000440683 FKBP8Q14318 412 aa12.33□□□□□ -0.44
AC002542.1-201ENST00000440683 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
AC002542.1-201ENST00000440683 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
AC002542.1-201ENST00000440683 OTUD5Q96G74 571 aa12.21□□□□□ -0.45
AC002542.1-201ENST00000440683 RTN4Q9NQC3 1192 aaKnown RBP12.21□□□□□ -0.45
AC002542.1-201ENST00000440683 POTEMA6NI47 508 aa12.2□□□□□ -0.46
AC002542.1-201ENST00000440683 ZNF579Q8NAF0 562 aaKnown RBP12.2□□□□□ -0.46
AC002542.1-201ENST00000440683 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
AC002542.1-201ENST00000440683 POTEGQ6S5H5 508 aa12.15□□□□□ -0.46
AC002542.1-201ENST00000440683 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
AC002542.1-201ENST00000440683 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
AC002542.1-201ENST00000440683 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
AC002542.1-201ENST00000440683 GALR2O43603 387 aaPredicted RBP12.03□□□□□ -0.48
AC002542.1-201ENST00000440683 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
AC002542.1-201ENST00000440683 CREBZFQ9NS37 354 aa11.9□□□□□ -0.5
AC002542.1-201ENST00000440683 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
AC002542.1-201ENST00000440683 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
AC002542.1-201ENST00000440683 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
AC002542.1-201ENST00000440683 C7P10643 843 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms