RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
LINC01549-201ENST00000440664 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
LINC01549-201ENST00000440664 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
LINC01549-201ENST00000440664 PHF23Q9BUL5 403 aaPredicted RBP19.75■□□□□ 0.75
LINC01549-201ENST00000440664 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
LINC01549-201ENST00000440664 FOXD1Q16676 465 aa18.9■□□□□ 0.62
LINC01549-201ENST00000440664 MSH5O43196 834 aa18.12■□□□□ 0.49
LINC01549-201ENST00000440664 PIAS4Q8N2W9 510 aaPredicted RBP17.49■□□□□ 0.39
LINC01549-201ENST00000440664 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
LINC01549-201ENST00000440664 ADRA2BP18089 450 aa16.8■□□□□ 0.28
LINC01549-201ENST00000440664 PLPPR3Q6T4P5 718 aa16.54■□□□□ 0.24
LINC01549-201ENST00000440664 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
LINC01549-201ENST00000440664 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
LINC01549-201ENST00000440664 MAPK8IP2Q13387 824 aaPredicted RBP15.73■□□□□ 0.11
LINC01549-201ENST00000440664 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
LINC01549-201ENST00000440664 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
LINC01549-201ENST00000440664 RNF39Q9H2S5 420 aa15.33■□□□□ 0.04
LINC01549-201ENST00000440664 C1QBPQ07021 282 aaKnown RBP15.06■□□□□ 0
LINC01549-201ENST00000440664 POTEHQ6S545 545 aa15.03■□□□□ -0
LINC01549-201ENST00000440664 HOXD11P31277 338 aaPredicted RBP14.79□□□□□ -0.04
LINC01549-201ENST00000440664 RNF216Q9NWF9 866 aaPredicted RBP14.44□□□□□ -0.1
LINC01549-201ENST00000440664 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
LINC01549-201ENST00000440664 PPP4R3CPQ6ZMV5 832 aa14.36□□□□□ -0.11
LINC01549-201ENST00000440664 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
LINC01549-201ENST00000440664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.22□□□□□ -0.13
LINC01549-201ENST00000440664 DSG3P32926 999 aa14.02□□□□□ -0.17
LINC01549-201ENST00000440664 CAPN15O75808 1086 aa13.95□□□□□ -0.18
LINC01549-201ENST00000440664 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
LINC01549-201ENST00000440664 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
LINC01549-201ENST00000440664 SP7Q8TDD2 431 aaPredicted RBP13.6□□□□□ -0.23
LINC01549-201ENST00000440664 CHRDL2Q6WN34 429 aa13.57□□□□□ -0.24
LINC01549-201ENST00000440664 ABCB7O75027 752 aa13.53□□□□□ -0.24
LINC01549-201ENST00000440664 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
LINC01549-201ENST00000440664 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
LINC01549-201ENST00000440664 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
LINC01549-201ENST00000440664 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
LINC01549-201ENST00000440664 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
LINC01549-201ENST00000440664 APLP2Q06481 763 aa13.29□□□□□ -0.28
LINC01549-201ENST00000440664 HAX1O00165 279 aa13.11□□□□□ -0.31
LINC01549-201ENST00000440664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
LINC01549-201ENST00000440664 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
LINC01549-201ENST00000440664 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
LINC01549-201ENST00000440664 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
LINC01549-201ENST00000440664 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
LINC01549-201ENST00000440664 SAMD1Q6SPF0 538 aaPredicted RBP12.9□□□□□ -0.34
LINC01549-201ENST00000440664 AKT1S1Q96B36 256 aa12.89□□□□□ -0.35
LINC01549-201ENST00000440664 POLA2Q14181 598 aa12.84□□□□□ -0.35
LINC01549-201ENST00000440664 REM2Q8IYK8 340 aaPredicted RBP12.78□□□□□ -0.36
LINC01549-201ENST00000440664 EVX2Q03828 476 aa12.77□□□□□ -0.37
LINC01549-201ENST00000440664 LHX8Q68G74 356 aa12.76□□□□□ -0.37
LINC01549-201ENST00000440664 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC01549-201ENST00000440664 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
LINC01549-201ENST00000440664 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
LINC01549-201ENST00000440664 OSCARQ8IYS5 282 aa12.49□□□□□ -0.41
LINC01549-201ENST00000440664 GABBR2O75899 941 aa12.45□□□□□ -0.42
LINC01549-201ENST00000440664 C19orf67A6NJJ6 358 aa12.35□□□□□ -0.43
LINC01549-201ENST00000440664 PRKAR2AP13861 404 aaKnown RBP12.35□□□□□ -0.43
LINC01549-201ENST00000440664 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
LINC01549-201ENST00000440664 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
LINC01549-201ENST00000440664 KCNA4P22459 653 aa12.15□□□□□ -0.46
LINC01549-201ENST00000440664 POTEIP0CG38 1075 aa12.14□□□□□ -0.47
LINC01549-201ENST00000440664 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
LINC01549-201ENST00000440664 POTEMA6NI47 508 aa12.09□□□□□ -0.47
LINC01549-201ENST00000440664 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
LINC01549-201ENST00000440664 POTEGQ6S5H5 508 aa12.02□□□□□ -0.49
LINC01549-201ENST00000440664 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
LINC01549-201ENST00000440664 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
LINC01549-201ENST00000440664 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
LINC01549-201ENST00000440664 CHADLQ6NUI6 762 aa12□□□□□ -0.49
LINC01549-201ENST00000440664 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
LINC01549-201ENST00000440664 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
LINC01549-201ENST00000440664 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
LINC01549-201ENST00000440664 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
LINC01549-201ENST00000440664 CLCN6P51797 869 aa11.88□□□□□ -0.51
LINC01549-201ENST00000440664 FBLN2P98095 1184 aa11.79□□□□□ -0.52
LINC01549-201ENST00000440664 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
LINC01549-201ENST00000440664 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
LINC01549-201ENST00000440664 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
LINC01549-201ENST00000440664 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
LINC01549-201ENST00000440664 FARP1Q9Y4F1 1045 aaPredicted RBP11.69□□□□□ -0.54
LINC01549-201ENST00000440664 FOXD4L1Q9NU39 408 aa11.66□□□□□ -0.54
LINC01549-201ENST00000440664 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
LINC01549-201ENST00000440664 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
LINC01549-201ENST00000440664 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
LINC01549-201ENST00000440664 FAM163AQ96GL9 167 aaPredicted RBP11.54□□□□□ -0.56
LINC01549-201ENST00000440664 PABPN1Q86U42 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC01549-201ENST00000440664 LCE2DQ5TA82 110 aaPredicted RBP11.5□□□□□ -0.57
LINC01549-201ENST00000440664 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
LINC01549-201ENST00000440664 MAMSTRQ6ZN01 415 aa11.44□□□□□ -0.58
LINC01549-201ENST00000440664 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
LINC01549-201ENST00000440664 METRNQ9UJH8 293 aa11.4□□□□□ -0.58
LINC01549-201ENST00000440664 POTEJP0CG39 1038 aa11.37□□□□□ -0.59
LINC01549-201ENST00000440664 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
LINC01549-201ENST00000440664 ATXN8OSP0DMR3 200 aa11.35□□□□□ -0.59
LINC01549-201ENST00000440664 SCUBE2Q9NQ36 999 aa11.35□□□□□ -0.59
LINC01549-201ENST00000440664 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
LINC01549-201ENST00000440664 PAK3O75914 559 aaPredicted RBP11.31□□□□□ -0.6
LINC01549-201ENST00000440664 C7P10643 843 aa11.31□□□□□ -0.6
LINC01549-201ENST00000440664 SLC39A7Q92504 469 aa11.31□□□□□ -0.6
LINC01549-201ENST00000440664 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms