RNA–Protein interactions for RNA: ENST00000440479.1

AC105339.1-203, humanhuman

TSL 1 (best)

Gene AC105339.1, Length 2,569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.1-203ENST00000440479 NISCHQ9Y2I1 1504 aa27.12■■□□□ 1.93
AC105339.1-203ENST00000440479 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.3
AC105339.1-203ENST00000440479 ZCCHC6Q5VYS8 1495 aaKnown RBP23■■□□□ 1.27
AC105339.1-203ENST00000440479 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
AC105339.1-203ENST00000440479 SUPT5HO00267 1087 aaKnown RBP22.95■■□□□ 1.26
AC105339.1-203ENST00000440479 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
AC105339.1-203ENST00000440479 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
AC105339.1-203ENST00000440479 HRCP23327 699 aa22.41■■□□□ 1.18
AC105339.1-203ENST00000440479 DCAF1Q9Y4B6 1507 aa22.33■■□□□ 1.17
AC105339.1-203ENST00000440479 DCAF8L2P0C7V8 631 aa22.28■■□□□ 1.16
AC105339.1-203ENST00000440479 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
AC105339.1-203ENST00000440479 LOC105371045A0A1W2PR82 267 aa21.8■■□□□ 1.08
AC105339.1-203ENST00000440479 ABCC9O60706 1549 aa21.76■■□□□ 1.07
AC105339.1-203ENST00000440479 PPARGC1BQ86YN6 1023 aaKnown RBP21.74■■□□□ 1.07
AC105339.1-203ENST00000440479 TRIM26Q12899 539 aaPredicted RBP21.72■■□□□ 1.07
AC105339.1-203ENST00000440479 RSF1Q96T23 1441 aaPredicted RBP21.56■■□□□ 1.04
AC105339.1-203ENST00000440479 ZEB1P37275 1124 aaPredicted RBP21.47■■□□□ 1.03
AC105339.1-203ENST00000440479 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
AC105339.1-203ENST00000440479 TRIM41Q8WV44 630 aa21.43■■□□□ 1.02
AC105339.1-203ENST00000440479 RB1CC1Q8TDY2 1594 aa21.42■■□□□ 1.02
AC105339.1-203ENST00000440479 NACADO15069 1562 aa21.16■□□□□ 0.98
AC105339.1-203ENST00000440479 FAM9AQ8IZU1 332 aaPredicted RBP21.15■□□□□ 0.98
AC105339.1-203ENST00000440479 CECR2Q9BXF3 1484 aa21.06■□□□□ 0.96
AC105339.1-203ENST00000440479 MROH2BQ7Z745 1585 aa21.05■□□□□ 0.96
AC105339.1-203ENST00000440479 WIZO95785 1651 aa20.95■□□□□ 0.94
AC105339.1-203ENST00000440479 PELP1Q8IZL8 1130 aaKnown RBP20.94■□□□□ 0.94
AC105339.1-203ENST00000440479 BAZ1AQ9NRL2 1556 aaPredicted RBP20.91■□□□□ 0.94
AC105339.1-203ENST00000440479 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
AC105339.1-203ENST00000440479 EIF4G1Q04637 1599 aaKnown RBP20.84■□□□□ 0.93
AC105339.1-203ENST00000440479 SCAF1Q9H7N4 1312 aaKnown RBP20.77■□□□□ 0.92
AC105339.1-203ENST00000440479 CCER1Q8TC90 406 aaPredicted RBP20.71■□□□□ 0.91
AC105339.1-203ENST00000440479 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
AC105339.1-203ENST00000440479 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
AC105339.1-203ENST00000440479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
AC105339.1-203ENST00000440479 SMARCA4P51532 1647 aa20.58■□□□□ 0.88
AC105339.1-203ENST00000440479 CCDC88BA6NC98 1476 aa20.57■□□□□ 0.88
AC105339.1-203ENST00000440479 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
AC105339.1-203ENST00000440479 EEA1Q15075 1411 aa20.56■□□□□ 0.88
AC105339.1-203ENST00000440479 TNIKQ9UKE5 1360 aa20.56■□□□□ 0.88
AC105339.1-203ENST00000440479 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
AC105339.1-203ENST00000440479 CEP162Q5TB80 1403 aa20.55■□□□□ 0.88
AC105339.1-203ENST00000440479 ACIN1Q9UKV3 1341 aaKnown RBP20.55■□□□□ 0.88
AC105339.1-203ENST00000440479 DIEXFQ68CQ4 756 aaKnown RBP20.49■□□□□ 0.87
AC105339.1-203ENST00000440479 SOGA1O94964 1423 aa20.45■□□□□ 0.86
AC105339.1-203ENST00000440479 CENPBP07199 599 aaPredicted RBP20.44■□□□□ 0.86
AC105339.1-203ENST00000440479 CSRNP3Q8WYN3 585 aa20.43■□□□□ 0.86
AC105339.1-203ENST00000440479 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
AC105339.1-203ENST00000440479 UNC13AQ9UPW8 1703 aa20.37■□□□□ 0.85
AC105339.1-203ENST00000440479 GOLGA3Q08378 1498 aa20.36■□□□□ 0.85
AC105339.1-203ENST00000440479 UBTFP17480 764 aaKnown RBP20.35■□□□□ 0.85
AC105339.1-203ENST00000440479 TTBK1Q5TCY1 1321 aaPredicted RBP20.32■□□□□ 0.84
AC105339.1-203ENST00000440479 RUSC2Q8N2Y8 1516 aa20.31■□□□□ 0.84
AC105339.1-203ENST00000440479 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
AC105339.1-203ENST00000440479 GTF3C3Q9Y5Q9 886 aa20.27■□□□□ 0.84
AC105339.1-203ENST00000440479 CEP164Q9UPV0 1460 aa20.23■□□□□ 0.83
AC105339.1-203ENST00000440479 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
AC105339.1-203ENST00000440479 KIF21BO75037 1637 aa20.21■□□□□ 0.83
AC105339.1-203ENST00000440479 CLIP1P30622 1438 aa20.12■□□□□ 0.81
AC105339.1-203ENST00000440479 BAZ1BQ9UIG0 1483 aaKnown RBP20.11■□□□□ 0.81
AC105339.1-203ENST00000440479 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
AC105339.1-203ENST00000440479 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
AC105339.1-203ENST00000440479 VPS8Q8N3P4 1428 aa20.09■□□□□ 0.81
AC105339.1-203ENST00000440479 HNRNPUL2Q1KMD3 747 aaKnown RBP20.04■□□□□ 0.8
AC105339.1-203ENST00000440479 MYT1Q01538 1121 aa20.03■□□□□ 0.8
AC105339.1-203ENST00000440479 APLP2Q06481 763 aa20.03■□□□□ 0.8
AC105339.1-203ENST00000440479 PABPN1Q86U42 306 aaKnown RBP eCLIP19.99■□□□□ 0.79
AC105339.1-203ENST00000440479 ATAD2BQ9ULI0 1458 aa19.97■□□□□ 0.79
AC105339.1-203ENST00000440479 MIER1Q8N108 512 aa19.96■□□□□ 0.79
AC105339.1-203ENST00000440479 RAPGEF2Q9Y4G8 1499 aa19.95■□□□□ 0.78
AC105339.1-203ENST00000440479 CLSPNQ9HAW4 1339 aa19.94■□□□□ 0.78
AC105339.1-203ENST00000440479 YTHDC1Q96MU7 727 aaKnown RBP19.92■□□□□ 0.78
AC105339.1-203ENST00000440479 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
AC105339.1-203ENST00000440479 ERICH3Q5RHP9 1530 aa19.85■□□□□ 0.77
AC105339.1-203ENST00000440479 BIVM-ERCC5R4GMW8 1640 aa19.82■□□□□ 0.76
AC105339.1-203ENST00000440479 PRXQ9BXM0 1461 aa19.78■□□□□ 0.76
AC105339.1-203ENST00000440479 DHX57Q6P158 1386 aaKnown RBP19.76■□□□□ 0.75
AC105339.1-203ENST00000440479 RANGAP1P46060 587 aaPredicted RBP19.74■□□□□ 0.75
AC105339.1-203ENST00000440479 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
AC105339.1-203ENST00000440479 RRBP1Q9P2E9 1410 aaKnown RBP19.69■□□□□ 0.74
AC105339.1-203ENST00000440479 CUX2O14529 1486 aa19.65■□□□□ 0.74
AC105339.1-203ENST00000440479 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
AC105339.1-203ENST00000440479 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
AC105339.1-203ENST00000440479 HMGXB3Q12766 1538 aa19.59■□□□□ 0.73
AC105339.1-203ENST00000440479 CUX1P39880 1505 aa19.58■□□□□ 0.73
AC105339.1-203ENST00000440479 CCNB3Q8WWL7 1395 aa19.57■□□□□ 0.72
AC105339.1-203ENST00000440479 NCAPD3P42695 1498 aa19.56■□□□□ 0.72
AC105339.1-203ENST00000440479 ARHGAP35Q9NRY4 1499 aa19.52■□□□□ 0.72
AC105339.1-203ENST00000440479 CFTRP13569 1480 aa19.48■□□□□ 0.71
AC105339.1-203ENST00000440479 SUPT16HQ9Y5B9 1047 aaKnown RBP19.48■□□□□ 0.71
AC105339.1-203ENST00000440479 MAP3K1Q13233 1512 aa19.47■□□□□ 0.71
AC105339.1-203ENST00000440479 RAB3GAP2Q9H2M9 1393 aa19.4■□□□□ 0.7
AC105339.1-203ENST00000440479 TIAM1Q13009 1591 aa19.39■□□□□ 0.69
AC105339.1-203ENST00000440479 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
AC105339.1-203ENST00000440479 MAPKBP1O60336 1514 aa19.37■□□□□ 0.69
AC105339.1-203ENST00000440479 ITGAEP38570 1179 aa19.36■□□□□ 0.69
AC105339.1-203ENST00000440479 IGF1RP08069 1367 aa19.36■□□□□ 0.69
AC105339.1-203ENST00000440479 SETD5Q9C0A6 1442 aa19.36■□□□□ 0.69
AC105339.1-203ENST00000440479 LRRC9Q6ZRR7 1453 aa19.32■□□□□ 0.68
AC105339.1-203ENST00000440479 TIMELESSQ9UNS1 1208 aa19.31■□□□□ 0.68
AC105339.1-203ENST00000440479 FHAD1B1AJZ9 1412 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms