RNA–Protein interactions for RNA: ENST00000439961.2

SUMO1P3-201, Transcript of SUMO1 pseudogene 3, humanhuman

BASIC

Gene SUMO1P3, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1P3-201ENST00000439961 AEBP2Q6ZN18 517 aaPredicted RBP23.76■■□□□ 1.39
SUMO1P3-201ENST00000439961 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
SUMO1P3-201ENST00000439961 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
SUMO1P3-201ENST00000439961 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
SUMO1P3-201ENST00000439961 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
SUMO1P3-201ENST00000439961 FOXD1Q16676 465 aa19.16■□□□□ 0.66
SUMO1P3-201ENST00000439961 MSH5O43196 834 aa18.37■□□□□ 0.53
SUMO1P3-201ENST00000439961 PIAS4Q8N2W9 510 aaPredicted RBP17.76■□□□□ 0.43
SUMO1P3-201ENST00000439961 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
SUMO1P3-201ENST00000439961 ADRA2BP18089 450 aa17.11■□□□□ 0.33
SUMO1P3-201ENST00000439961 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
SUMO1P3-201ENST00000439961 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
SUMO1P3-201ENST00000439961 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
SUMO1P3-201ENST00000439961 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
SUMO1P3-201ENST00000439961 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
SUMO1P3-201ENST00000439961 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
SUMO1P3-201ENST00000439961 RNF39Q9H2S5 420 aa15.53■□□□□ 0.08
SUMO1P3-201ENST00000439961 C1QBPQ07021 282 aaKnown RBP15.29■□□□□ 0.04
SUMO1P3-201ENST00000439961 HOXD11P31277 338 aaPredicted RBP15.14■□□□□ 0.01
SUMO1P3-201ENST00000439961 POTEHQ6S545 545 aa15.03■□□□□ -0
SUMO1P3-201ENST00000439961 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
SUMO1P3-201ENST00000439961 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
SUMO1P3-201ENST00000439961 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.05
SUMO1P3-201ENST00000439961 CNKSR2Q8WXI2 1034 aa14.73□□□□□ -0.05
SUMO1P3-201ENST00000439961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.09
SUMO1P3-201ENST00000439961 DSG3P32926 999 aa14.24□□□□□ -0.13
SUMO1P3-201ENST00000439961 CAPN15O75808 1086 aa14.17□□□□□ -0.14
SUMO1P3-201ENST00000439961 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
SUMO1P3-201ENST00000439961 U3KPZ7 1027 aaPredicted RBP14.02□□□□□ -0.17
SUMO1P3-201ENST00000439961 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
SUMO1P3-201ENST00000439961 ABCB7O75027 752 aa13.73□□□□□ -0.21
SUMO1P3-201ENST00000439961 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
SUMO1P3-201ENST00000439961 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
SUMO1P3-201ENST00000439961 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
SUMO1P3-201ENST00000439961 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
SUMO1P3-201ENST00000439961 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
SUMO1P3-201ENST00000439961 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
SUMO1P3-201ENST00000439961 APLP2Q06481 763 aa13.67□□□□□ -0.22
SUMO1P3-201ENST00000439961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
SUMO1P3-201ENST00000439961 HNRNPUL2Q1KMD3 747 aaKnown RBP13.42□□□□□ -0.26
SUMO1P3-201ENST00000439961 SLC4A2P04920 1241 aa13.3□□□□□ -0.28
SUMO1P3-201ENST00000439961 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
SUMO1P3-201ENST00000439961 HAX1O00165 279 aa13.2□□□□□ -0.3
SUMO1P3-201ENST00000439961 PIP4P2Q8N4L2 257 aa13.16□□□□□ -0.3
SUMO1P3-201ENST00000439961 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
SUMO1P3-201ENST00000439961 POLA2Q14181 598 aa13.12□□□□□ -0.31
SUMO1P3-201ENST00000439961 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
SUMO1P3-201ENST00000439961 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
SUMO1P3-201ENST00000439961 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
SUMO1P3-201ENST00000439961 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
SUMO1P3-201ENST00000439961 EVX2Q03828 476 aa12.86□□□□□ -0.35
SUMO1P3-201ENST00000439961 LHX8Q68G74 356 aa12.81□□□□□ -0.36
SUMO1P3-201ENST00000439961 PLSCR2Q9NRY7 297 aa12.79□□□□□ -0.36
SUMO1P3-201ENST00000439961 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
SUMO1P3-201ENST00000439961 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
SUMO1P3-201ENST00000439961 KCNA4P22459 653 aa12.66□□□□□ -0.38
SUMO1P3-201ENST00000439961 GABBR2O75899 941 aa12.58□□□□□ -0.4
SUMO1P3-201ENST00000439961 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
SUMO1P3-201ENST00000439961 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
SUMO1P3-201ENST00000439961 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
SUMO1P3-201ENST00000439961 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
SUMO1P3-201ENST00000439961 SPDYE1Q8NFV5 336 aaPredicted RBP12.37□□□□□ -0.43
SUMO1P3-201ENST00000439961 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
SUMO1P3-201ENST00000439961 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
SUMO1P3-201ENST00000439961 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
SUMO1P3-201ENST00000439961 POTEIP0CG38 1075 aa12.26□□□□□ -0.45
SUMO1P3-201ENST00000439961 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
SUMO1P3-201ENST00000439961 CLCN6P51797 869 aa12.16□□□□□ -0.46
SUMO1P3-201ENST00000439961 FBLN2P98095 1184 aa12.16□□□□□ -0.46
SUMO1P3-201ENST00000439961 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
SUMO1P3-201ENST00000439961 DCBLD2Q96PD2 775 aa12.13□□□□□ -0.47
SUMO1P3-201ENST00000439961 POTEMA6NI47 508 aa12.12□□□□□ -0.47
SUMO1P3-201ENST00000439961 CD44P16070 742 aaKnown RBP12.12□□□□□ -0.47
SUMO1P3-201ENST00000439961 POTEGQ6S5H5 508 aa12.05□□□□□ -0.48
SUMO1P3-201ENST00000439961 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
SUMO1P3-201ENST00000439961 PRR29P0C7W0 189 aa12.04□□□□□ -0.48
SUMO1P3-201ENST00000439961 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
SUMO1P3-201ENST00000439961 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
SUMO1P3-201ENST00000439961 PCDH10Q9P2E7 1040 aa12□□□□□ -0.49
SUMO1P3-201ENST00000439961 FARP1Q9Y4F1 1045 aaPredicted RBP11.93□□□□□ -0.5
SUMO1P3-201ENST00000439961 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
SUMO1P3-201ENST00000439961 ATXN8OSP0DMR3 200 aa11.86□□□□□ -0.51
SUMO1P3-201ENST00000439961 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
SUMO1P3-201ENST00000439961 POTEB2H3BUK9 544 aa11.83□□□□□ -0.52
SUMO1P3-201ENST00000439961 PABPN1Q86U42 306 aaKnown RBP eCLIP11.83□□□□□ -0.52
SUMO1P3-201ENST00000439961 SLC4A1APQ9BWU0 796 aaKnown RBP11.82□□□□□ -0.52
SUMO1P3-201ENST00000439961 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
SUMO1P3-201ENST00000439961 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
SUMO1P3-201ENST00000439961 MAMSTRQ6ZN01 415 aa11.63□□□□□ -0.55
SUMO1P3-201ENST00000439961 FAM163AQ96GL9 167 aaPredicted RBP11.6□□□□□ -0.55
SUMO1P3-201ENST00000439961 ZBTB22O15209 634 aa11.59□□□□□ -0.55
SUMO1P3-201ENST00000439961 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
SUMO1P3-201ENST00000439961 LCE2DQ5TA82 110 aaPredicted RBP11.59□□□□□ -0.55
SUMO1P3-201ENST00000439961 METRNQ9UJH8 293 aa11.58□□□□□ -0.56
SUMO1P3-201ENST00000439961 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
SUMO1P3-201ENST00000439961 PHF12Q96QT6 1004 aa11.54□□□□□ -0.56
SUMO1P3-201ENST00000439961 SLC39A7Q92504 469 aa11.53□□□□□ -0.56
SUMO1P3-201ENST00000439961 SCUBE2Q9NQ36 999 aa11.53□□□□□ -0.56
SUMO1P3-201ENST00000439961 C7P10643 843 aa11.52□□□□□ -0.57
SUMO1P3-201ENST00000439961 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms