RNA–Protein interactions for RNA: ENST00000439021.5

LYRM1-204, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LYRM1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-204ENST00000439021 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
LYRM1-204ENST00000439021 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
LYRM1-204ENST00000439021 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
LYRM1-204ENST00000439021 SENP3Q9H4L4 574 aaPredicted RBP18.34■□□□□ 0.53
LYRM1-204ENST00000439021 FOXD1Q16676 465 aa17.12■□□□□ 0.33
LYRM1-204ENST00000439021 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
LYRM1-204ENST00000439021 PELP1Q8IZL8 1130 aaKnown RBP17.08■□□□□ 0.32
LYRM1-204ENST00000439021 MYT1Q01538 1121 aa16.98■□□□□ 0.31
LYRM1-204ENST00000439021 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
LYRM1-204ENST00000439021 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
LYRM1-204ENST00000439021 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
LYRM1-204ENST00000439021 ADRA2BP18089 450 aa16.3■□□□□ 0.2
LYRM1-204ENST00000439021 MSH5O43196 834 aa16.18■□□□□ 0.18
LYRM1-204ENST00000439021 PIAS4Q8N2W9 510 aaPredicted RBP16.02■□□□□ 0.16
LYRM1-204ENST00000439021 HRCP23327 699 aa15.57■□□□□ 0.08
LYRM1-204ENST00000439021 ERICH6Q7L0X2 663 aa15.36■□□□□ 0.05
LYRM1-204ENST00000439021 APLP2Q06481 763 aa15.17■□□□□ 0.02
LYRM1-204ENST00000439021 PRKCSHP14314 528 aaPredicted RBP15.11■□□□□ 0.01
LYRM1-204ENST00000439021 PPP4R3CPQ6ZMV5 832 aa15.05■□□□□ -0
LYRM1-204ENST00000439021 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
LYRM1-204ENST00000439021 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
LYRM1-204ENST00000439021 BCL11AQ9H165 835 aa14.88□□□□□ -0.03
LYRM1-204ENST00000439021 CENPBP07199 599 aaPredicted RBP14.8□□□□□ -0.04
LYRM1-204ENST00000439021 MAPK8IP2Q13387 824 aaPredicted RBP14.78□□□□□ -0.04
LYRM1-204ENST00000439021 KCNA4P22459 653 aa14.67□□□□□ -0.06
LYRM1-204ENST00000439021 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
LYRM1-204ENST00000439021 ZEB1P37275 1124 aaPredicted RBP14.65□□□□□ -0.06
LYRM1-204ENST00000439021 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
LYRM1-204ENST00000439021 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
LYRM1-204ENST00000439021 ACIN1Q9UKV3 1341 aaKnown RBP14.57□□□□□ -0.08
LYRM1-204ENST00000439021 FAM9AQ8IZU1 332 aaPredicted RBP14.56□□□□□ -0.08
LYRM1-204ENST00000439021 DAXXQ9UER7 740 aaPredicted RBP14.56□□□□□ -0.08
LYRM1-204ENST00000439021 PPARGC1BQ86YN6 1023 aaKnown RBP14.53□□□□□ -0.08
LYRM1-204ENST00000439021 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
LYRM1-204ENST00000439021 DCAF1Q9Y4B6 1507 aa14.4□□□□□ -0.1
LYRM1-204ENST00000439021 CCDC180Q9P1Z9 1646 aa14.39□□□□□ -0.11
LYRM1-204ENST00000439021 ANP32EQ9BTT0 268 aa14.39□□□□□ -0.11
LYRM1-204ENST00000439021 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
LYRM1-204ENST00000439021 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
LYRM1-204ENST00000439021 NISCHQ9Y2I1 1504 aa14.33□□□□□ -0.12
LYRM1-204ENST00000439021 PCGF6Q9BYE7 350 aa14.32□□□□□ -0.12
LYRM1-204ENST00000439021 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
LYRM1-204ENST00000439021 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
LYRM1-204ENST00000439021 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
LYRM1-204ENST00000439021 CACNB1Q02641 598 aaPredicted RBP14.15□□□□□ -0.14
LYRM1-204ENST00000439021 EIF5BO60841 1220 aaKnown RBP14.12□□□□□ -0.15
LYRM1-204ENST00000439021 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
LYRM1-204ENST00000439021 DNAJC5BQ9UF47 199 aa14.09□□□□□ -0.15
LYRM1-204ENST00000439021 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
LYRM1-204ENST00000439021 MYT1LQ9UL68 1186 aa14.07□□□□□ -0.16
LYRM1-204ENST00000439021 UBE2Q2Q8WVN8 375 aa14.06□□□□□ -0.16
LYRM1-204ENST00000439021 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
LYRM1-204ENST00000439021 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
LYRM1-204ENST00000439021 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.18
LYRM1-204ENST00000439021 ERICH6BQ5W0A0 696 aa13.94□□□□□ -0.18
LYRM1-204ENST00000439021 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
LYRM1-204ENST00000439021 TSHZ2Q9NRE2 1034 aa13.69□□□□□ -0.22
LYRM1-204ENST00000439021 DIEXFQ68CQ4 756 aaKnown RBP13.67□□□□□ -0.22
LYRM1-204ENST00000439021 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
LYRM1-204ENST00000439021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■■□□□ 11.8
LYRM1-204ENST00000439021 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
LYRM1-204ENST00000439021 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.23
LYRM1-204ENST00000439021 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
LYRM1-204ENST00000439021 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
LYRM1-204ENST00000439021 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
LYRM1-204ENST00000439021 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
LYRM1-204ENST00000439021 EHMT2Q96KQ7 1210 aa13.52□□□□□ -0.25
LYRM1-204ENST00000439021 ZBTB22O15209 634 aa13.5□□□□□ -0.25
LYRM1-204ENST00000439021 SUPT16HQ9Y5B9 1047 aaKnown RBP13.48□□□□□ -0.25
LYRM1-204ENST00000439021 NEFLP07196 543 aa13.43□□□□□ -0.26
LYRM1-204ENST00000439021 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
LYRM1-204ENST00000439021 FANCIQ9NVI1 1328 aa13.41□□□□□ -0.26
LYRM1-204ENST00000439021 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
LYRM1-204ENST00000439021 SALL2Q9Y467 1007 aaPredicted RBP13.36□□□□□ -0.27
LYRM1-204ENST00000439021 PLEKHG5O94827 1062 aa13.34□□□□□ -0.27
LYRM1-204ENST00000439021 GLIPR1L2Q4G1C9 344 aa13.34□□□□□ -0.27
LYRM1-204ENST00000439021 RANGAP1P46060 587 aaPredicted RBP13.33□□□□□ -0.28
LYRM1-204ENST00000439021 ARXQ96QS3 562 aa13.33□□□□□ -0.28
LYRM1-204ENST00000439021 DEKP35659 375 aaKnown RBP13.32□□□□□ -0.28
LYRM1-204ENST00000439021 ZNF316A6NFI3 1004 aaPredicted RBP13.32□□□□□ -0.28
LYRM1-204ENST00000439021 CCER1Q8TC90 406 aaPredicted RBP13.28□□□□□ -0.28
LYRM1-204ENST00000439021 RBM19Q9Y4C8 960 aaKnown RBP13.28□□□□□ -0.28
LYRM1-204ENST00000439021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
LYRM1-204ENST00000439021 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
LYRM1-204ENST00000439021 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
LYRM1-204ENST00000439021 C11orf95C9JLR9 678 aaPredicted RBP13.12□□□□□ -0.31
LYRM1-204ENST00000439021 RSPH6AQ9H0K4 717 aa13.11□□□□□ -0.31
LYRM1-204ENST00000439021 YTHDC1Q96MU7 727 aaKnown RBP13.1□□□□□ -0.31
LYRM1-204ENST00000439021 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
LYRM1-204ENST00000439021 PDIA4P13667 645 aaKnown RBP13.08□□□□□ -0.32
LYRM1-204ENST00000439021 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.32
LYRM1-204ENST00000439021 MIER1Q8N108 512 aa13.07□□□□□ -0.32
LYRM1-204ENST00000439021 PDE4CQ08493 712 aa13.07□□□□□ -0.32
LYRM1-204ENST00000439021 SUPT5HO00267 1087 aaKnown RBP13.03□□□□□ -0.32
LYRM1-204ENST00000439021 FGD1P98174 961 aa13.03□□□□□ -0.32
LYRM1-204ENST00000439021 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
LYRM1-204ENST00000439021 CAPN15O75808 1086 aa12.97□□□□□ -0.33
LYRM1-204ENST00000439021 TAF7LQ5H9L4 462 aa12.97□□□□□ -0.33
LYRM1-204ENST00000439021 ZMYND15Q9H091 742 aa12.97□□□□□ -0.33
LYRM1-204ENST00000439021 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms