RNA–Protein interactions for RNA: ENST00000438956.5

ETV1-213, Transcript of ETS variant 1, humanhuman

TSL 1 (best)

Gene ETV1, Length 1,141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETV1-213ENST00000438956 AEBP2Q6ZN18 517 aaPredicted RBP25.96■■□□□ 1.75
ETV1-213ENST00000438956 CHIC1Q5VXU3 224 aa24.98■■□□□ 1.59
ETV1-213ENST00000438956 SENP3Q9H4L4 574 aaPredicted RBP22.28■■□□□ 1.16
ETV1-213ENST00000438956 PHF23Q9BUL5 403 aaPredicted RBP21.95■■□□□ 1.1
ETV1-213ENST00000438956 FOXD1Q16676 465 aa20.62■□□□□ 0.89
ETV1-213ENST00000438956 PLPPR3Q6T4P5 718 aa20.14■□□□□ 0.81
ETV1-213ENST00000438956 PIAS4Q8N2W9 510 aaPredicted RBP19.4■□□□□ 0.7
ETV1-213ENST00000438956 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
ETV1-213ENST00000438956 ADRA2BP18089 450 aa19.39■□□□□ 0.69
ETV1-213ENST00000438956 MSH5O43196 834 aa19.35■□□□□ 0.69
ETV1-213ENST00000438956 POTEDQ86YR6 584 aa18.36■□□□□ 0.53
ETV1-213ENST00000438956 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
ETV1-213ENST00000438956 MAPK8IP2Q13387 824 aaPredicted RBP17.71■□□□□ 0.43
ETV1-213ENST00000438956 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
ETV1-213ENST00000438956 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
ETV1-213ENST00000438956 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
ETV1-213ENST00000438956 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
ETV1-213ENST00000438956 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
ETV1-213ENST00000438956 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
ETV1-213ENST00000438956 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.31
ETV1-213ENST00000438956 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
ETV1-213ENST00000438956 KCNA4P22459 653 aa16.61■□□□□ 0.25
ETV1-213ENST00000438956 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
ETV1-213ENST00000438956 RNF39Q9H2S5 420 aa16.46■□□□□ 0.23
ETV1-213ENST00000438956 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
ETV1-213ENST00000438956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.21
ETV1-213ENST00000438956 C1QBPQ07021 282 aaKnown RBP16.29■□□□□ 0.2
ETV1-213ENST00000438956 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
ETV1-213ENST00000438956 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
ETV1-213ENST00000438956 SLC4A1APQ9BWU0 796 aaKnown RBP15.81■□□□□ 0.12
ETV1-213ENST00000438956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.75■□□□□ 0.11
ETV1-213ENST00000438956 APLP2Q06481 763 aa15.75■□□□□ 0.11
ETV1-213ENST00000438956 HNRNPUL2Q1KMD3 747 aaKnown RBP15.75■□□□□ 0.11
ETV1-213ENST00000438956 CAPN15O75808 1086 aa15.67■□□□□ 0.1
ETV1-213ENST00000438956 SAMD1Q6SPF0 538 aaPredicted RBP15.63■□□□□ 0.09
ETV1-213ENST00000438956 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
ETV1-213ENST00000438956 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
ETV1-213ENST00000438956 ZNF219Q9P2Y4 722 aaPredicted RBP15.52■□□□□ 0.08
ETV1-213ENST00000438956 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
ETV1-213ENST00000438956 DSG3P32926 999 aa15.47■□□□□ 0.07
ETV1-213ENST00000438956 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
ETV1-213ENST00000438956 ABCB7O75027 752 aa15.27■□□□□ 0.04
ETV1-213ENST00000438956 ZBTB22O15209 634 aa15.22■□□□□ 0.03
ETV1-213ENST00000438956 POLA2Q14181 598 aa15.09■□□□□ 0.01
ETV1-213ENST00000438956 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
ETV1-213ENST00000438956 ATF5Q9Y2D1 282 aaPredicted RBP15.04■□□□□ -0
ETV1-213ENST00000438956 ZBTB12Q9Y330 459 aaPredicted RBP14.93□□□□□ -0.02
ETV1-213ENST00000438956 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
ETV1-213ENST00000438956 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
ETV1-213ENST00000438956 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
ETV1-213ENST00000438956 FBLN2P98095 1184 aa14.64□□□□□ -0.07
ETV1-213ENST00000438956 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
ETV1-213ENST00000438956 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
ETV1-213ENST00000438956 POTEHQ6S545 545 aa14.47□□□□□ -0.09
ETV1-213ENST00000438956 SPDYE2BA6NHP3 402 aa14.42□□□□□ -0.1
ETV1-213ENST00000438956 SPDYE6P0CI01 402 aa14.42□□□□□ -0.1
ETV1-213ENST00000438956 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
ETV1-213ENST00000438956 CHRDL2Q6WN34 429 aa14.38□□□□□ -0.11
ETV1-213ENST00000438956 MKRN4PQ13434 485 aaPredicted RBP14.37□□□□□ -0.11
ETV1-213ENST00000438956 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
ETV1-213ENST00000438956 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
ETV1-213ENST00000438956 SSUH2Q9Y2M2 353 aa14.2□□□□□ -0.14
ETV1-213ENST00000438956 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
ETV1-213ENST00000438956 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
ETV1-213ENST00000438956 PIP4P2Q8N4L2 257 aa14.06□□□□□ -0.16
ETV1-213ENST00000438956 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
ETV1-213ENST00000438956 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
ETV1-213ENST00000438956 FXR2P51116 673 aaKnown RBP eCLIP14.02□□□□□ -0.17
ETV1-213ENST00000438956 SPDYE4A6NLX3 237 aa13.93□□□□□ -0.18
ETV1-213ENST00000438956 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
ETV1-213ENST00000438956 PRKAR2AP13861 404 aaKnown RBP13.85□□□□□ -0.19
ETV1-213ENST00000438956 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
ETV1-213ENST00000438956 HAX1O00165 279 aa13.79□□□□□ -0.2
ETV1-213ENST00000438956 SP7Q8TDD2 431 aaPredicted RBP13.7□□□□□ -0.22
ETV1-213ENST00000438956 CHADLQ6NUI6 762 aa13.68□□□□□ -0.22
ETV1-213ENST00000438956 PROM2Q8N271 834 aa13.57□□□□□ -0.24
ETV1-213ENST00000438956 FARP1Q9Y4F1 1045 aaPredicted RBP13.57□□□□□ -0.24
ETV1-213ENST00000438956 C19orf67A6NJJ6 358 aa13.56□□□□□ -0.24
ETV1-213ENST00000438956 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
ETV1-213ENST00000438956 EVX2Q03828 476 aa13.49□□□□□ -0.25
ETV1-213ENST00000438956 FKBP8Q14318 412 aa13.45□□□□□ -0.26
ETV1-213ENST00000438956 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
ETV1-213ENST00000438956 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
ETV1-213ENST00000438956 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
ETV1-213ENST00000438956 CLCN6P51797 869 aa13.34□□□□□ -0.27
ETV1-213ENST00000438956 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
ETV1-213ENST00000438956 GABBR2O75899 941 aa13.3□□□□□ -0.28
ETV1-213ENST00000438956 MIER1Q8N108 512 aa13.28□□□□□ -0.28
ETV1-213ENST00000438956 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
ETV1-213ENST00000438956 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
ETV1-213ENST00000438956 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
ETV1-213ENST00000438956 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
ETV1-213ENST00000438956 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
ETV1-213ENST00000438956 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
ETV1-213ENST00000438956 DCBLD2Q96PD2 775 aa13.08□□□□□ -0.32
ETV1-213ENST00000438956 PHF12Q96QT6 1004 aa13.07□□□□□ -0.32
ETV1-213ENST00000438956 TSPYL2Q9H2G4 693 aaPredicted RBP13.07□□□□□ -0.32
ETV1-213ENST00000438956 GALR2O43603 387 aaPredicted RBP13□□□□□ -0.33
ETV1-213ENST00000438956 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
ETV1-213ENST00000438956 CCDC61Q9Y6R9 512 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms