RNA–Protein interactions for RNA: ENST00000438923.1

AC005550.1-201, humanhuman

TSL 2 BASIC

Gene AC005550.1, Length 312 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005550.1-201ENST00000438923 AEBP2Q6ZN18 517 aaPredicted RBP29.49■■■□□ 2.31
AC005550.1-201ENST00000438923 CHIC1Q5VXU3 224 aa27.99■■■□□ 2.07
AC005550.1-201ENST00000438923 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.65
AC005550.1-201ENST00000438923 PHF23Q9BUL5 403 aaPredicted RBP24.94■■□□□ 1.58
AC005550.1-201ENST00000438923 FOXD1Q16676 465 aa23.52■■□□□ 1.36
AC005550.1-201ENST00000438923 PLPPR3Q6T4P5 718 aa22.4■■□□□ 1.18
AC005550.1-201ENST00000438923 MSH5O43196 834 aa22.17■■□□□ 1.14
AC005550.1-201ENST00000438923 PIAS4Q8N2W9 510 aaPredicted RBP22.08■■□□□ 1.13
AC005550.1-201ENST00000438923 ADRA2BP18089 450 aa21.87■■□□□ 1.09
AC005550.1-201ENST00000438923 PPP6R1Q9UPN7 881 aa21.87■■□□□ 1.09
AC005550.1-201ENST00000438923 POTEDQ86YR6 584 aa21.71■■□□□ 1.07
AC005550.1-201ENST00000438923 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
AC005550.1-201ENST00000438923 MAPK8IP2Q13387 824 aaPredicted RBP20.1■□□□□ 0.81
AC005550.1-201ENST00000438923 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
AC005550.1-201ENST00000438923 PPP4R3CPQ6ZMV5 832 aa19.59■□□□□ 0.73
AC005550.1-201ENST00000438923 DCAF8L1A6NGE4 600 aa19.4■□□□□ 0.7
AC005550.1-201ENST00000438923 CNKSR2Q8WXI2 1034 aa19.26■□□□□ 0.67
AC005550.1-201ENST00000438923 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
AC005550.1-201ENST00000438923 CACNB1Q02641 598 aaPredicted RBP19.13■□□□□ 0.65
AC005550.1-201ENST00000438923 RNF216Q9NWF9 866 aaPredicted RBP19.09■□□□□ 0.65
AC005550.1-201ENST00000438923 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
AC005550.1-201ENST00000438923 RNF39Q9H2S5 420 aa18.82■□□□□ 0.6
AC005550.1-201ENST00000438923 C1QBPQ07021 282 aaKnown RBP18.6■□□□□ 0.57
AC005550.1-201ENST00000438923 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
AC005550.1-201ENST00000438923 NPM3O75607 178 aaKnown RBP18.51■□□□□ 0.55
AC005550.1-201ENST00000438923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.55
AC005550.1-201ENST00000438923 KCNA4P22459 653 aa18.06■□□□□ 0.48
AC005550.1-201ENST00000438923 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
AC005550.1-201ENST00000438923 CAPN15O75808 1086 aa17.83■□□□□ 0.44
AC005550.1-201ENST00000438923 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
AC005550.1-201ENST00000438923 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
AC005550.1-201ENST00000438923 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
AC005550.1-201ENST00000438923 APLP2Q06481 763 aa17.62■□□□□ 0.41
AC005550.1-201ENST00000438923 DSG3P32926 999 aa17.6■□□□□ 0.41
AC005550.1-201ENST00000438923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
AC005550.1-201ENST00000438923 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
AC005550.1-201ENST00000438923 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
AC005550.1-201ENST00000438923 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
AC005550.1-201ENST00000438923 SAMD1Q6SPF0 538 aaPredicted RBP17.4■□□□□ 0.38
AC005550.1-201ENST00000438923 ABCB7O75027 752 aa17.35■□□□□ 0.37
AC005550.1-201ENST00000438923 MYCNP04198 464 aaPredicted RBP17.19■□□□□ 0.34
AC005550.1-201ENST00000438923 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
AC005550.1-201ENST00000438923 POTEHQ6S545 545 aa17.05■□□□□ 0.32
AC005550.1-201ENST00000438923 POLA2Q14181 598 aa16.95■□□□□ 0.3
AC005550.1-201ENST00000438923 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
AC005550.1-201ENST00000438923 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
AC005550.1-201ENST00000438923 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
AC005550.1-201ENST00000438923 ZBTB12Q9Y330 459 aaPredicted RBP16.67■□□□□ 0.26
AC005550.1-201ENST00000438923 ZBTB22O15209 634 aa16.53■□□□□ 0.24
AC005550.1-201ENST00000438923 CHRDL2Q6WN34 429 aa16.53■□□□□ 0.24
AC005550.1-201ENST00000438923 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
AC005550.1-201ENST00000438923 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
AC005550.1-201ENST00000438923 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
AC005550.1-201ENST00000438923 REM2Q8IYK8 340 aaPredicted RBP16.27■□□□□ 0.2
AC005550.1-201ENST00000438923 FBLN2P98095 1184 aa16.25■□□□□ 0.19
AC005550.1-201ENST00000438923 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
AC005550.1-201ENST00000438923 SPDYE2BA6NHP3 402 aa16.08■□□□□ 0.16
AC005550.1-201ENST00000438923 SPDYE6P0CI01 402 aa16.08■□□□□ 0.16
AC005550.1-201ENST00000438923 SPDYE2Q495Y8 402 aa16.08■□□□□ 0.16
AC005550.1-201ENST00000438923 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
AC005550.1-201ENST00000438923 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.14
AC005550.1-201ENST00000438923 SP7Q8TDD2 431 aaPredicted RBP15.94■□□□□ 0.14
AC005550.1-201ENST00000438923 HAX1O00165 279 aa15.92■□□□□ 0.14
AC005550.1-201ENST00000438923 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
AC005550.1-201ENST00000438923 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
AC005550.1-201ENST00000438923 CLEC11AQ9Y240 323 aa15.9■□□□□ 0.14
AC005550.1-201ENST00000438923 SPDYE1Q8NFV5 336 aaPredicted RBP15.87■□□□□ 0.13
AC005550.1-201ENST00000438923 SSUH2Q9Y2M2 353 aa15.78■□□□□ 0.12
AC005550.1-201ENST00000438923 PRKAR2AP13861 404 aaKnown RBP15.73■□□□□ 0.11
AC005550.1-201ENST00000438923 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
AC005550.1-201ENST00000438923 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
AC005550.1-201ENST00000438923 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
AC005550.1-201ENST00000438923 CCDC180Q9P1Z9 1646 aa15.63■□□□□ 0.09
AC005550.1-201ENST00000438923 PRR29P0C7W0 189 aa15.6■□□□□ 0.09
AC005550.1-201ENST00000438923 ABCC9O60706 1549 aa15.58■□□□□ 0.09
AC005550.1-201ENST00000438923 EVX2Q03828 476 aa15.53■□□□□ 0.08
AC005550.1-201ENST00000438923 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
AC005550.1-201ENST00000438923 C19orf67A6NJJ6 358 aa15.44■□□□□ 0.06
AC005550.1-201ENST00000438923 FARP1Q9Y4F1 1045 aaPredicted RBP15.27■□□□□ 0.04
AC005550.1-201ENST00000438923 GABBR2O75899 941 aa15.26■□□□□ 0.03
AC005550.1-201ENST00000438923 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
AC005550.1-201ENST00000438923 CD44P16070 742 aaKnown RBP15.25■□□□□ 0.03
AC005550.1-201ENST00000438923 SPDYE4A6NLX3 237 aa15.24■□□□□ 0.03
AC005550.1-201ENST00000438923 CREBZFQ9NS37 354 aa15.06■□□□□ 0
AC005550.1-201ENST00000438923 CLCN6P51797 869 aa15.05■□□□□ -0
AC005550.1-201ENST00000438923 ZRANB1Q9UGI0 708 aa15.03■□□□□ -0
AC005550.1-201ENST00000438923 PAK3O75914 559 aaPredicted RBP14.98□□□□□ -0.01
AC005550.1-201ENST00000438923 LHX8Q68G74 356 aa14.97□□□□□ -0.01
AC005550.1-201ENST00000438923 DCBLD2Q96PD2 775 aa14.96□□□□□ -0.01
AC005550.1-201ENST00000438923 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
AC005550.1-201ENST00000438923 ZNF579Q8NAF0 562 aaKnown RBP14.94□□□□□ -0.02
AC005550.1-201ENST00000438923 NPM1P06748 294 aaKnown RBP eCLIP14.93□□□□□ -0.02
AC005550.1-201ENST00000438923 POTEIP0CG38 1075 aa14.84□□□□□ -0.03
AC005550.1-201ENST00000438923 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
AC005550.1-201ENST00000438923 NACADO15069 1562 aa14.8□□□□□ -0.04
AC005550.1-201ENST00000438923 GALR2O43603 387 aaPredicted RBP14.76□□□□□ -0.05
AC005550.1-201ENST00000438923 PHF12Q96QT6 1004 aa14.76□□□□□ -0.05
AC005550.1-201ENST00000438923 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
AC005550.1-201ENST00000438923 PLEKHG5O94827 1062 aa14.72□□□□□ -0.05
AC005550.1-201ENST00000438923 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms