RNA–Protein interactions for RNA: ENST00000438684.1

MSL3P1-201, Transcript of MSL complex subunit 3 pseudogene 1, humanhuman

TSL 2 BASIC

Gene MSL3P1, Length 2,032 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3P1-201ENST00000438684 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
MSL3P1-201ENST00000438684 SHROOM4Q9ULL8 1493 aa15.19■□□□□ 0.02
MSL3P1-201ENST00000438684 CCDC180Q9P1Z9 1646 aa15.17■□□□□ 0.02
MSL3P1-201ENST00000438684 ZCCHC6Q5VYS8 1495 aaKnown RBP15.09■□□□□ 0.01
MSL3P1-201ENST00000438684 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
MSL3P1-201ENST00000438684 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
MSL3P1-201ENST00000438684 DCAF1Q9Y4B6 1507 aa14.69□□□□□ -0.06
MSL3P1-201ENST00000438684 CHIC1Q5VXU3 224 aa14.67□□□□□ -0.06
MSL3P1-201ENST00000438684 MYO15BQ96JP2 1530 aa14.57□□□□□ -0.08
MSL3P1-201ENST00000438684 HRCP23327 699 aa14.5□□□□□ -0.09
MSL3P1-201ENST00000438684 PCGF6Q9BYE7 350 aa14.36□□□□□ -0.11
MSL3P1-201ENST00000438684 ABCC9O60706 1549 aa14.28□□□□□ -0.12
MSL3P1-201ENST00000438684 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
MSL3P1-201ENST00000438684 TRIM26Q12899 539 aaPredicted RBP14.15□□□□□ -0.14
MSL3P1-201ENST00000438684 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
MSL3P1-201ENST00000438684 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
MSL3P1-201ENST00000438684 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
MSL3P1-201ENST00000438684 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
MSL3P1-201ENST00000438684 PPARGC1BQ86YN6 1023 aaKnown RBP14.04□□□□□ -0.16
MSL3P1-201ENST00000438684 ZEB1P37275 1124 aaPredicted RBP14.01□□□□□ -0.17
MSL3P1-201ENST00000438684 NACADO15069 1562 aa13.99□□□□□ -0.17
MSL3P1-201ENST00000438684 FAM9AQ8IZU1 332 aaPredicted RBP13.85□□□□□ -0.19
MSL3P1-201ENST00000438684 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
MSL3P1-201ENST00000438684 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
MSL3P1-201ENST00000438684 WIZO95785 1651 aa13.76□□□□□ -0.21
MSL3P1-201ENST00000438684 BAZ1AQ9NRL2 1556 aaPredicted RBP13.74□□□□□ -0.21
MSL3P1-201ENST00000438684 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
MSL3P1-201ENST00000438684 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
MSL3P1-201ENST00000438684 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
MSL3P1-201ENST00000438684 SMARCA4P51532 1647 aa13.55□□□□□ -0.24
MSL3P1-201ENST00000438684 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
MSL3P1-201ENST00000438684 CCER1Q8TC90 406 aaPredicted RBP13.52□□□□□ -0.24
MSL3P1-201ENST00000438684 CCDC88BA6NC98 1476 aa13.5□□□□□ -0.25
MSL3P1-201ENST00000438684 WRNQ14191 1432 aaPredicted RBP eCLIP13.5□□□□□ -0.25
MSL3P1-201ENST00000438684 EEA1Q15075 1411 aa13.5□□□□□ -0.25
MSL3P1-201ENST00000438684 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
MSL3P1-201ENST00000438684 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
MSL3P1-201ENST00000438684 ABCC8Q09428 1581 aa13.47□□□□□ -0.25
MSL3P1-201ENST00000438684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.45□□□□□ -0.26
MSL3P1-201ENST00000438684 TNIKQ9UKE5 1360 aa13.45□□□□□ -0.26
MSL3P1-201ENST00000438684 CEP162Q5TB80 1403 aa13.44□□□□□ -0.26
MSL3P1-201ENST00000438684 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
MSL3P1-201ENST00000438684 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
MSL3P1-201ENST00000438684 SOGA1O94964 1423 aa13.37□□□□□ -0.27
MSL3P1-201ENST00000438684 UBTFP17480 764 aaKnown RBP13.37□□□□□ -0.27
MSL3P1-201ENST00000438684 GOLGA3Q08378 1498 aa13.36□□□□□ -0.27
MSL3P1-201ENST00000438684 DIEXFQ68CQ4 756 aaKnown RBP13.32□□□□□ -0.28
MSL3P1-201ENST00000438684 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
MSL3P1-201ENST00000438684 ACIN1Q9UKV3 1341 aaKnown RBP13.3□□□□□ -0.28
MSL3P1-201ENST00000438684 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
MSL3P1-201ENST00000438684 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
MSL3P1-201ENST00000438684 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
MSL3P1-201ENST00000438684 CEP164Q9UPV0 1460 aa13.27□□□□□ -0.28
MSL3P1-201ENST00000438684 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.29
MSL3P1-201ENST00000438684 KIF21BO75037 1637 aa13.25□□□□□ -0.29
MSL3P1-201ENST00000438684 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
MSL3P1-201ENST00000438684 ZNF316A6NFI3 1004 aaPredicted RBP13.21□□□□□ -0.29
MSL3P1-201ENST00000438684 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
MSL3P1-201ENST00000438684 APLP2Q06481 763 aa13.2□□□□□ -0.3
MSL3P1-201ENST00000438684 BAZ1BQ9UIG0 1483 aaKnown RBP13.19□□□□□ -0.3
MSL3P1-201ENST00000438684 NEUROD1Q13562 356 aa13.19□□□□□ -0.3
MSL3P1-201ENST00000438684 CLIP1P30622 1438 aa13.18□□□□□ -0.3
MSL3P1-201ENST00000438684 SYNJ1O43426 1573 aa13.18□□□□□ -0.3
MSL3P1-201ENST00000438684 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.3
MSL3P1-201ENST00000438684 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
MSL3P1-201ENST00000438684 GTF3C3Q9Y5Q9 886 aa13.12□□□□□ -0.31
MSL3P1-201ENST00000438684 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
MSL3P1-201ENST00000438684 TOP2BQ02880 1626 aa13.07□□□□□ -0.32
MSL3P1-201ENST00000438684 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
MSL3P1-201ENST00000438684 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
MSL3P1-201ENST00000438684 BIVM-ERCC5R4GMW8 1640 aa13.03□□□□□ -0.32
MSL3P1-201ENST00000438684 CLSPNQ9HAW4 1339 aa13.01□□□□□ -0.33
MSL3P1-201ENST00000438684 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.33
MSL3P1-201ENST00000438684 MYT1Q01538 1121 aa12.96□□□□□ -0.34
MSL3P1-201ENST00000438684 MIER1Q8N108 512 aa12.96□□□□□ -0.34
MSL3P1-201ENST00000438684 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.34
MSL3P1-201ENST00000438684 PRXQ9BXM0 1461 aa12.95□□□□□ -0.34
MSL3P1-201ENST00000438684 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
MSL3P1-201ENST00000438684 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
MSL3P1-201ENST00000438684 KIF27Q86VH2 1401 aa12.92□□□□□ -0.34
MSL3P1-201ENST00000438684 ARAP1Q96P48 1450 aa12.9□□□□□ -0.34
MSL3P1-201ENST00000438684 NCAPD3P42695 1498 aa12.89□□□□□ -0.35
MSL3P1-201ENST00000438684 DHX57Q6P158 1386 aaKnown RBP12.87□□□□□ -0.35
MSL3P1-201ENST00000438684 CUX1P39880 1505 aa12.86□□□□□ -0.35
MSL3P1-201ENST00000438684 RRBP1Q9P2E9 1410 aaKnown RBP12.86□□□□□ -0.35
MSL3P1-201ENST00000438684 CFTRP13569 1480 aa12.82□□□□□ -0.36
MSL3P1-201ENST00000438684 KANK4Q5T7N3 995 aaPredicted RBP12.82□□□□□ -0.36
MSL3P1-201ENST00000438684 CUX2O14529 1486 aa12.81□□□□□ -0.36
MSL3P1-201ENST00000438684 CCNB3Q8WWL7 1395 aa12.8□□□□□ -0.36
MSL3P1-201ENST00000438684 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
MSL3P1-201ENST00000438684 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
MSL3P1-201ENST00000438684 MAP3K1Q13233 1512 aa12.76□□□□□ -0.37
MSL3P1-201ENST00000438684 TIAM1Q13009 1591 aa12.71□□□□□ -0.38
MSL3P1-201ENST00000438684 IGF1RP08069 1367 aa12.7□□□□□ -0.38
MSL3P1-201ENST00000438684 ITGAEP38570 1179 aa12.69□□□□□ -0.38
MSL3P1-201ENST00000438684 FHAD1B1AJZ9 1412 aa12.69□□□□□ -0.38
MSL3P1-201ENST00000438684 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
MSL3P1-201ENST00000438684 RAB3GAP2Q9H2M9 1393 aa12.68□□□□□ -0.38
MSL3P1-201ENST00000438684 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
MSL3P1-201ENST00000438684 CADPSQ9ULU8 1353 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms