RNA–Protein interactions for RNA: ENST00000438345.1

SDR42E1P3-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1 pseudogene 3, humanhuman

BASIC

Gene SDR42E1P3, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1P3-201ENST00000438345 AEBP2Q6ZN18 517 aaPredicted RBP36.78■■■■□ 3.48
SDR42E1P3-201ENST00000438345 CHIC1Q5VXU3 224 aa35.39■■■■□ 3.26
SDR42E1P3-201ENST00000438345 SENP3Q9H4L4 574 aaPredicted RBP31.29■■■□□ 2.6
SDR42E1P3-201ENST00000438345 PHF23Q9BUL5 403 aaPredicted RBP31.08■■■□□ 2.57
SDR42E1P3-201ENST00000438345 FOXD1Q16676 465 aa29.11■■■□□ 2.25
SDR42E1P3-201ENST00000438345 PLPPR3Q6T4P5 718 aa28.49■■■□□ 2.15
SDR42E1P3-201ENST00000438345 PPP6R1Q9UPN7 881 aa27.59■■■□□ 2.01
SDR42E1P3-201ENST00000438345 ADRA2BP18089 450 aa27.54■■■□□ 2
SDR42E1P3-201ENST00000438345 PIAS4Q8N2W9 510 aaPredicted RBP27.31■■□□□ 1.96
SDR42E1P3-201ENST00000438345 MSH5O43196 834 aa27.05■■□□□ 1.92
SDR42E1P3-201ENST00000438345 POTEDQ86YR6 584 aa25.58■■□□□ 1.69
SDR42E1P3-201ENST00000438345 SCAF1Q9H7N4 1312 aaKnown RBP25.17■■□□□ 1.62
SDR42E1P3-201ENST00000438345 MAPK8IP2Q13387 824 aaPredicted RBP25.14■■□□□ 1.62
SDR42E1P3-201ENST00000438345 PPP4R3CPQ6ZMV5 832 aa25.04■■□□□ 1.6
SDR42E1P3-201ENST00000438345 DMRT2Q9Y5R5 561 aa24.9■■□□□ 1.58
SDR42E1P3-201ENST00000438345 CNKSR2Q8WXI2 1034 aa24.46■■□□□ 1.51
SDR42E1P3-201ENST00000438345 NCBP3Q53F19 620 aaKnown RBP24.22■■□□□ 1.47
SDR42E1P3-201ENST00000438345 HOXD11P31277 338 aaPredicted RBP24.17■■□□□ 1.46
SDR42E1P3-201ENST00000438345 RNF216Q9NWF9 866 aaPredicted RBP24.11■■□□□ 1.45
SDR42E1P3-201ENST00000438345 KCNA4P22459 653 aa23.9■■□□□ 1.42
SDR42E1P3-201ENST00000438345 NPM3O75607 178 aaKnown RBP23.88■■□□□ 1.41
SDR42E1P3-201ENST00000438345 DCAF8L1A6NGE4 600 aa23.84■■□□□ 1.41
SDR42E1P3-201ENST00000438345 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
SDR42E1P3-201ENST00000438345 RNF39Q9H2S5 420 aa23.13■■□□□ 1.29
SDR42E1P3-201ENST00000438345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.02■■□□□ 1.28
SDR42E1P3-201ENST00000438345 CACNB1Q02641 598 aaPredicted RBP22.91■■□□□ 1.26
SDR42E1P3-201ENST00000438345 C1QBPQ07021 282 aaKnown RBP22.81■■□□□ 1.24
SDR42E1P3-201ENST00000438345 SLC4A2P04920 1241 aa22.69■■□□□ 1.22
SDR42E1P3-201ENST00000438345 SLC4A1APQ9BWU0 796 aaKnown RBP22.64■■□□□ 1.21
SDR42E1P3-201ENST00000438345 U3KPZ7 1027 aaPredicted RBP22.61■■□□□ 1.21
SDR42E1P3-201ENST00000438345 SPINK5Q9NQ38 1064 aaPredicted RBP22.13■■□□□ 1.13
SDR42E1P3-201ENST00000438345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
SDR42E1P3-201ENST00000438345 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
SDR42E1P3-201ENST00000438345 FOXD4L1Q9NU39 408 aa22.11■■□□□ 1.13
SDR42E1P3-201ENST00000438345 MYCNP04198 464 aaPredicted RBP22.07■■□□□ 1.12
SDR42E1P3-201ENST00000438345 CAPN15O75808 1086 aa22.06■■□□□ 1.12
SDR42E1P3-201ENST00000438345 ZBTB22O15209 634 aa22.03■■□□□ 1.12
SDR42E1P3-201ENST00000438345 SAMD1Q6SPF0 538 aaPredicted RBP22.02■■□□□ 1.12
SDR42E1P3-201ENST00000438345 APLP2Q06481 763 aa22.01■■□□□ 1.11
SDR42E1P3-201ENST00000438345 TRHP20396 242 aaPredicted RBP21.82■■□□□ 1.08
SDR42E1P3-201ENST00000438345 DSG3P32926 999 aa21.82■■□□□ 1.08
SDR42E1P3-201ENST00000438345 ZNF219Q9P2Y4 722 aaPredicted RBP21.8■■□□□ 1.08
SDR42E1P3-201ENST00000438345 EHMT2Q96KQ7 1210 aa21.72■■□□□ 1.07
SDR42E1P3-201ENST00000438345 ABCB7O75027 752 aa21.6■■□□□ 1.05
SDR42E1P3-201ENST00000438345 CSRNP3Q8WYN3 585 aa21.6■■□□□ 1.05
SDR42E1P3-201ENST00000438345 ATF5Q9Y2D1 282 aaPredicted RBP21.54■■□□□ 1.04
SDR42E1P3-201ENST00000438345 ATXN8OSP0DMR3 200 aa21.39■■□□□ 1.01
SDR42E1P3-201ENST00000438345 POLA2Q14181 598 aa21.35■■□□□ 1.01
SDR42E1P3-201ENST00000438345 ZBTB12Q9Y330 459 aaPredicted RBP20.96■□□□□ 0.95
SDR42E1P3-201ENST00000438345 RBM42Q9BTD8 480 aaKnown RBP20.8■□□□□ 0.92
SDR42E1P3-201ENST00000438345 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
SDR42E1P3-201ENST00000438345 FBLN2P98095 1184 aa20.65■□□□□ 0.9
SDR42E1P3-201ENST00000438345 MKRN4PQ13434 485 aaPredicted RBP20.58■□□□□ 0.89
SDR42E1P3-201ENST00000438345 AKT1S1Q96B36 256 aa20.44■□□□□ 0.86
SDR42E1P3-201ENST00000438345 SPDYE2BA6NHP3 402 aa20.35■□□□□ 0.85
SDR42E1P3-201ENST00000438345 SPDYE6P0CI01 402 aa20.35■□□□□ 0.85
SDR42E1P3-201ENST00000438345 SPDYE2Q495Y8 402 aa20.35■□□□□ 0.85
SDR42E1P3-201ENST00000438345 REM2Q8IYK8 340 aaPredicted RBP20.25■□□□□ 0.83
SDR42E1P3-201ENST00000438345 ZNF692Q9BU19 519 aaPredicted RBP20.19■□□□□ 0.82
SDR42E1P3-201ENST00000438345 CHRDL2Q6WN34 429 aa20.16■□□□□ 0.82
SDR42E1P3-201ENST00000438345 SSUH2Q9Y2M2 353 aa20.14■□□□□ 0.81
SDR42E1P3-201ENST00000438345 POTEHQ6S545 545 aa20.13■□□□□ 0.81
SDR42E1P3-201ENST00000438345 PITPNM1O00562 1244 aa20.03■□□□□ 0.8
SDR42E1P3-201ENST00000438345 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
SDR42E1P3-201ENST00000438345 SPDYE1Q8NFV5 336 aaPredicted RBP19.88■□□□□ 0.77
SDR42E1P3-201ENST00000438345 SPDYE4A6NLX3 237 aa19.85■□□□□ 0.77
SDR42E1P3-201ENST00000438345 CLEC11AQ9Y240 323 aa19.81■□□□□ 0.76
SDR42E1P3-201ENST00000438345 PIP4P2Q8N4L2 257 aa19.79■□□□□ 0.76
SDR42E1P3-201ENST00000438345 FXR2P51116 673 aaKnown RBP eCLIP19.76■□□□□ 0.75
SDR42E1P3-201ENST00000438345 PRR29P0C7W0 189 aa19.55■□□□□ 0.72
SDR42E1P3-201ENST00000438345 FKBP8Q14318 412 aa19.53■□□□□ 0.72
SDR42E1P3-201ENST00000438345 PRKAR2AP13861 404 aaKnown RBP19.51■□□□□ 0.71
SDR42E1P3-201ENST00000438345 STAG3Q9UJ98 1225 aa19.46■□□□□ 0.71
SDR42E1P3-201ENST00000438345 PROM2Q8N271 834 aa19.45■□□□□ 0.7
SDR42E1P3-201ENST00000438345 CHADLQ6NUI6 762 aa19.39■□□□□ 0.69
SDR42E1P3-201ENST00000438345 HAX1O00165 279 aa19.29■□□□□ 0.68
SDR42E1P3-201ENST00000438345 CREBZFQ9NS37 354 aa19.2■□□□□ 0.66
SDR42E1P3-201ENST00000438345 FARP1Q9Y4F1 1045 aaPredicted RBP19.16■□□□□ 0.66
SDR42E1P3-201ENST00000438345 C19orf67A6NJJ6 358 aa19.11■□□□□ 0.65
SDR42E1P3-201ENST00000438345 EVX2Q03828 476 aa19.1■□□□□ 0.65
SDR42E1P3-201ENST00000438345 SP7Q8TDD2 431 aaPredicted RBP19.1■□□□□ 0.65
SDR42E1P3-201ENST00000438345 MNX1P50219 401 aaPredicted RBP18.94■□□□□ 0.62
SDR42E1P3-201ENST00000438345 CD44P16070 742 aaKnown RBP18.92■□□□□ 0.62
SDR42E1P3-201ENST00000438345 MIER1Q8N108 512 aa18.86■□□□□ 0.61
SDR42E1P3-201ENST00000438345 NPM1P06748 294 aaKnown RBP eCLIP18.85■□□□□ 0.61
SDR42E1P3-201ENST00000438345 PLEKHG5O94827 1062 aa18.8■□□□□ 0.6
SDR42E1P3-201ENST00000438345 FBXO3Q9UK99 471 aa18.8■□□□□ 0.6
SDR42E1P3-201ENST00000438345 PLCD3Q8N3E9 789 aa18.78■□□□□ 0.6
SDR42E1P3-201ENST00000438345 ZRANB1Q9UGI0 708 aa18.73■□□□□ 0.59
SDR42E1P3-201ENST00000438345 GABBR2O75899 941 aa18.69■□□□□ 0.58
SDR42E1P3-201ENST00000438345 PAK3O75914 559 aaPredicted RBP18.67■□□□□ 0.58
SDR42E1P3-201ENST00000438345 ZNF579Q8NAF0 562 aaKnown RBP18.66■□□□□ 0.58
SDR42E1P3-201ENST00000438345 VASPP50552 380 aaPredicted RBP18.63■□□□□ 0.57
SDR42E1P3-201ENST00000438345 ZBTB47Q9UFB7 747 aaPredicted RBP18.6■□□□□ 0.57
SDR42E1P3-201ENST00000438345 CLCN6P51797 869 aa18.55■□□□□ 0.56
SDR42E1P3-201ENST00000438345 TSPYL2Q9H2G4 693 aaPredicted RBP18.53■□□□□ 0.56
SDR42E1P3-201ENST00000438345 PHF12Q96QT6 1004 aa18.52■□□□□ 0.56
SDR42E1P3-201ENST00000438345 RASEFQ8IZ41 740 aa18.51■□□□□ 0.55
SDR42E1P3-201ENST00000438345 NUBP1P53384 320 aa18.46■□□□□ 0.55
SDR42E1P3-201ENST00000438345 CCDC61Q9Y6R9 512 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms