RNA–Protein interactions for RNA: ENST00000437994.6

CD109-203, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,401 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-203ENST00000437994 PELP1Q8IZL8 1130 aaKnown RBP13.45□□□□□ -0.26
CD109-203ENST00000437994 MYT1Q01538 1121 aa12.88□□□□□ -0.35
CD109-203ENST00000437994 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.37
CD109-203ENST00000437994 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
CD109-203ENST00000437994 ERICH6Q7L0X2 663 aa12.55□□□□□ -0.4
CD109-203ENST00000437994 FAM9AQ8IZU1 332 aaPredicted RBP12.53□□□□□ -0.4
CD109-203ENST00000437994 APLP2Q06481 763 aa12.47□□□□□ -0.41
CD109-203ENST00000437994 CENPBP07199 599 aaPredicted RBP12.44□□□□□ -0.42
CD109-203ENST00000437994 YTHDC1Q96MU7 727 aaKnown RBP12.43□□□□□ -0.42
CD109-203ENST00000437994 NISCHQ9Y2I1 1504 aa12.39□□□□□ -0.43
CD109-203ENST00000437994 ZEB1P37275 1124 aaPredicted RBP12.36□□□□□ -0.43
CD109-203ENST00000437994 SUPT5HO00267 1087 aaKnown RBP12.25□□□□□ -0.45
CD109-203ENST00000437994 NEFLP07196 543 aa12.21□□□□□ -0.45
CD109-203ENST00000437994 DAXXQ9UER7 740 aaPredicted RBP12.04□□□□□ -0.48
CD109-203ENST00000437994 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
CD109-203ENST00000437994 SHROOM4Q9ULL8 1493 aa11.9□□□□□ -0.5
CD109-203ENST00000437994 PCGF6Q9BYE7 350 aa11.81□□□□□ -0.52
CD109-203ENST00000437994 RTL5Q5HYW3 569 aaPredicted RBP11.73□□□□□ -0.53
CD109-203ENST00000437994 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
CD109-203ENST00000437994 ZNF316A6NFI3 1004 aaPredicted RBP11.7□□□□□ -0.54
CD109-203ENST00000437994 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
CD109-203ENST00000437994 UBTFP17480 764 aaKnown RBP11.55□□□□□ -0.56
CD109-203ENST00000437994 ATP1B4Q9UN42 357 aaPredicted RBP11.52□□□□□ -0.57
CD109-203ENST00000437994 TRIM26Q12899 539 aaPredicted RBP11.51□□□□□ -0.57
CD109-203ENST00000437994 CLSPNQ9HAW4 1339 aa11.44□□□□□ -0.58
CD109-203ENST00000437994 GLIPR1L2Q4G1C9 344 aa11.44□□□□□ -0.58
CD109-203ENST00000437994 MYT1LQ9UL68 1186 aa11.38□□□□□ -0.59
CD109-203ENST00000437994 ZBTB47Q9UFB7 747 aaPredicted RBP11.37□□□□□ -0.59
CD109-203ENST00000437994 ANP32BQ92688 251 aaKnown RBP11.34□□□□□ -0.59
CD109-203ENST00000437994 RANGAP1P46060 587 aaPredicted RBP11.33□□□□□ -0.6
CD109-203ENST00000437994 NEFMP07197 916 aa11.31□□□□□ -0.6
CD109-203ENST00000437994 HRCP23327 699 aa11.31□□□□□ -0.6
CD109-203ENST00000437994 CDK11AQ9UQ88 783 aaPredicted RBP11.28□□□□□ -0.6
CD109-203ENST00000437994 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
CD109-203ENST00000437994 POLR3GLQ9BT43 218 aa11.21□□□□□ -0.62
CD109-203ENST00000437994 DIEXFQ68CQ4 756 aaKnown RBP11.2□□□□□ -0.62
CD109-203ENST00000437994 SLC4A1APQ9BWU0 796 aaKnown RBP11.17□□□□□ -0.62
CD109-203ENST00000437994 ANP32CO43423 234 aa11.13□□□□□ -0.63
CD109-203ENST00000437994 CANXP27824 592 aaKnown RBP11.11□□□□□ -0.63
CD109-203ENST00000437994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.11□□□□□ -0.63
CD109-203ENST00000437994 HNRNPUL2Q1KMD3 747 aaKnown RBP11.11□□□□□ -0.63
CD109-203ENST00000437994 UPF2Q9HAU5 1272 aaKnown RBP11.11□□□□□ -0.63
CD109-203ENST00000437994 HSP90AA1P07900 732 aaKnown RBP11.04□□□□□ -0.64
CD109-203ENST00000437994 ITGAEP38570 1179 aa11.02□□□□□ -0.65
CD109-203ENST00000437994 TNNT2P45379 298 aaPredicted RBP11□□□□□ -0.65
CD109-203ENST00000437994 ANP32EQ9BTT0 268 aa11□□□□□ -0.65
CD109-203ENST00000437994 EIF5BO60841 1220 aaKnown RBP10.98□□□□□ -0.65
CD109-203ENST00000437994 CDK11BP21127 795 aaKnown RBP10.96□□□□□ -0.65
CD109-203ENST00000437994 CCDC180Q9P1Z9 1646 aa10.92□□□□□ -0.66
CD109-203ENST00000437994 FAM50AQ14320 339 aaKnown RBP10.91□□□□□ -0.66
CD109-203ENST00000437994 GTF3C3Q9Y5Q9 886 aa10.9□□□□□ -0.66
CD109-203ENST00000437994 TRIM52Q96A61 297 aa10.88□□□□□ -0.67
CD109-203ENST00000437994 PPARGC1BQ86YN6 1023 aaKnown RBP10.87□□□□□ -0.67
CD109-203ENST00000437994 TRIM44Q96DX7 344 aaPredicted RBP10.87□□□□□ -0.67
CD109-203ENST00000437994 ACIN1Q9UKV3 1341 aaKnown RBP10.86□□□□□ -0.67
CD109-203ENST00000437994 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.86□□□□□ -0.67
CD109-203ENST00000437994 CHIC1Q5VXU3 224 aa10.84□□□□□ -0.67
CD109-203ENST00000437994 CNGB1Q14028 1251 aaPredicted RBP10.83□□□□□ -0.68
CD109-203ENST00000437994 SLC24A1O60721 1099 aa10.82□□□□□ -0.68
CD109-203ENST00000437994 DDRGK1Q96HY6 314 aa10.82□□□□□ -0.68
CD109-203ENST00000437994 BECN1Q14457 450 aa10.82□□□□□ -0.68
CD109-203ENST00000437994 MYH16Q9H6N6 1097 aa10.8□□□□□ -0.68
CD109-203ENST00000437994 GOLGA6L22H0YM25 854 aa10.79□□□□□ -0.68
CD109-203ENST00000437994 NCLP19338 710 aaKnown RBP10.77□□□□□ -0.68
CD109-203ENST00000437994 BCANQ96GW7 911 aa10.77□□□□□ -0.69
CD109-203ENST00000437994 NEUROD1Q13562 356 aa10.76□□□□□ -0.69
CD109-203ENST00000437994 DCAF1Q9Y4B6 1507 aa10.76□□□□□ -0.69
CD109-203ENST00000437994 GOLGA6L6A8MZA4 724 aa10.74□□□□□ -0.69
CD109-203ENST00000437994 TONSLQ96HA7 1378 aa10.73□□□□□ -0.69
CD109-203ENST00000437994 NPM2Q86SE8 214 aaKnown RBP10.72□□□□□ -0.69
CD109-203ENST00000437994 ZRSR1Q15695 479 aaKnown RBP10.72□□□□□ -0.69
CD109-203ENST00000437994 ZNF326Q5BKZ1 582 aaKnown RBP10.72□□□□□ -0.69
CD109-203ENST00000437994 CASC1Q6TDU7 716 aa10.71□□□□□ -0.7
CD109-203ENST00000437994 ERICH6BQ5W0A0 696 aa10.69□□□□□ -0.7
CD109-203ENST00000437994 NRDCO43847 1150 aa10.68□□□□□ -0.7
CD109-203ENST00000437994 L1TD1Q5T7N2 865 aaKnown RBP10.67□□□□□ -0.7
CD109-203ENST00000437994 CCDC136Q96JN2 1154 aa10.67□□□□□ -0.7
CD109-203ENST00000437994 CHAF1AQ13111 956 aaPredicted RBP10.64□□□□□ -0.71
CD109-203ENST00000437994 ESF1Q9H501 851 aaKnown RBP10.64□□□□□ -0.71
CD109-203ENST00000437994 LOC105371045A0A1W2PR82 267 aa10.63□□□□□ -0.71
CD109-203ENST00000437994 WDR43Q15061 677 aaKnown RBP eCLIP10.61□□□□□ -0.71
CD109-203ENST00000437994 CHMP4BQ9H444 224 aaKnown RBP10.61□□□□□ -0.71
CD109-203ENST00000437994 BCL11AQ9H165 835 aa10.6□□□□□ -0.71
CD109-203ENST00000437994 FKBP8Q14318 412 aa10.6□□□□□ -0.71
CD109-203ENST00000437994 PTMAP06454 111 aaKnown RBP10.59□□□□□ -0.71
CD109-203ENST00000437994 USP35Q9P2H5 1018 aa10.58□□□□□ -0.72
CD109-203ENST00000437994 CFAP44Q96MT7 982 aa10.58□□□□□ -0.72
CD109-203ENST00000437994 NBR1Q14596 966 aa10.58□□□□□ -0.72
CD109-203ENST00000437994 TMC1Q8TDI8 760 aa10.58□□□□□ -0.72
CD109-203ENST00000437994 PTMSP20962 102 aa10.57□□□□□ -0.72
CD109-203ENST00000437994 HNRNPUQ00839 825 aaKnown RBP eCLIP10.57□□□□□ -0.72
CD109-203ENST00000437994 DNTTIP2Q5QJE6 756 aaKnown RBP10.57□□□□□ -0.72
CD109-203ENST00000437994 PPM1GO15355 546 aaPredicted RBP10.56□□□□□ -0.72
CD109-203ENST00000437994 SCRIBQ14160 1630 aa10.56□□□□□ -0.72
CD109-203ENST00000437994 KAT6BQ8WYB5 2073 aa10.54□□□□□ -0.72
CD109-203ENST00000437994 ARID4BQ4LE39 1312 aaPredicted RBP10.52□□□□□ -0.72
CD109-203ENST00000437994 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
CD109-203ENST00000437994 MS4A1P11836 297 aa10.49□□□□□ -0.73
CD109-203ENST00000437994 CDCA8Q53HL2 280 aa10.49□□□□□ -0.73
CD109-203ENST00000437994 NAP1L5Q96NT1 182 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms