RNA–Protein interactions for RNA: ENST00000436592.5

LINC01554-202, Transcript of long intergenic non-protein coding RNA 1554, humanhuman

TSL 1 (best) BASIC

Gene LINC01554, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554-202ENST00000436592 NISCHQ9Y2I1 1504 aa38.73■■■■□ 3.79
LINC01554-202ENST00000436592 CCDC180Q9P1Z9 1646 aa33.36■■■□□ 2.93
LINC01554-202ENST00000436592 ZCCHC6Q5VYS8 1495 aaKnown RBP32.62■■■□□ 2.81
LINC01554-202ENST00000436592 SHROOM4Q9ULL8 1493 aa32.22■■■□□ 2.75
LINC01554-202ENST00000436592 DCAF8L2P0C7V8 631 aa32.08■■■□□ 2.73
LINC01554-202ENST00000436592 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
LINC01554-202ENST00000436592 ABCC9O60706 1549 aa31.34■■■□□ 2.61
LINC01554-202ENST00000436592 MYO15BQ96JP2 1530 aa31.3■■■□□ 2.6
LINC01554-202ENST00000436592 SUPT5HO00267 1087 aaKnown RBP31.27■■■□□ 2.6
LINC01554-202ENST00000436592 NACADO15069 1562 aa31.01■■■□□ 2.55
LINC01554-202ENST00000436592 SCRIBQ14160 1630 aa30.96■■■□□ 2.55
LINC01554-202ENST00000436592 RB1CC1Q8TDY2 1594 aa30.63■■■□□ 2.49
LINC01554-202ENST00000436592 RSF1Q96T23 1441 aaPredicted RBP30.33■■■□□ 2.45
LINC01554-202ENST00000436592 CECR2Q9BXF3 1484 aa30.17■■■□□ 2.42
LINC01554-202ENST00000436592 CHIC1Q5VXU3 224 aa30.15■■■□□ 2.42
LINC01554-202ENST00000436592 UNC13AQ9UPW8 1703 aa30.09■■■□□ 2.41
LINC01554-202ENST00000436592 MROH2BQ7Z745 1585 aa30.01■■■□□ 2.4
LINC01554-202ENST00000436592 BAZ1AQ9NRL2 1556 aaPredicted RBP29.82■■■□□ 2.36
LINC01554-202ENST00000436592 WIZO95785 1651 aa29.79■■■□□ 2.36
LINC01554-202ENST00000436592 BICRAQ9NZM4 1560 aa29.79■■■□□ 2.36
LINC01554-202ENST00000436592 PABPN1Q86U42 306 aaKnown RBP eCLIP29.77■■■□□ 2.36
LINC01554-202ENST00000436592 SMARCA4P51532 1647 aa29.64■■■□□ 2.34
LINC01554-202ENST00000436592 TOP2AP11388 1531 aaKnown RBP29.4■■■□□ 2.3
LINC01554-202ENST00000436592 TRIM41Q8WV44 630 aa29.27■■■□□ 2.28
LINC01554-202ENST00000436592 CCDC88BA6NC98 1476 aa29.21■■■□□ 2.27
LINC01554-202ENST00000436592 PEG3Q9GZU2 1588 aa29.19■■■□□ 2.26
LINC01554-202ENST00000436592 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
LINC01554-202ENST00000436592 LOC105371045A0A1W2PR82 267 aa29.13■■■□□ 2.25
LINC01554-202ENST00000436592 EIF4G1Q04637 1599 aaKnown RBP29.13■■■□□ 2.25
LINC01554-202ENST00000436592 ATAD2BQ9ULI0 1458 aa29.06■■■□□ 2.24
LINC01554-202ENST00000436592 BAZ1BQ9UIG0 1483 aaKnown RBP28.92■■■□□ 2.22
LINC01554-202ENST00000436592 FAM9AQ8IZU1 332 aaPredicted RBP28.87■■■□□ 2.21
LINC01554-202ENST00000436592 ABCC8Q09428 1581 aa28.81■■■□□ 2.2
LINC01554-202ENST00000436592 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
LINC01554-202ENST00000436592 HMGXB3Q12766 1538 aa28.62■■■□□ 2.17
LINC01554-202ENST00000436592 EHMT2Q96KQ7 1210 aa28.54■■■□□ 2.16
LINC01554-202ENST00000436592 WRNQ14191 1432 aaPredicted RBP eCLIP28.5■■■□□ 2.15
LINC01554-202ENST00000436592 SOGA1O94964 1423 aa28.41■■■□□ 2.14
LINC01554-202ENST00000436592 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
LINC01554-202ENST00000436592 PCGF6Q9BYE7 350 aa28.33■■■□□ 2.13
LINC01554-202ENST00000436592 RUSC2Q8N2Y8 1516 aa28.3■■■□□ 2.12
LINC01554-202ENST00000436592 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
LINC01554-202ENST00000436592 EEA1Q15075 1411 aa28.27■■■□□ 2.12
LINC01554-202ENST00000436592 CSRNP3Q8WYN3 585 aa28.23■■■□□ 2.11
LINC01554-202ENST00000436592 CFTRP13569 1480 aa28.21■■■□□ 2.11
LINC01554-202ENST00000436592 TOP2BQ02880 1626 aa28.14■■■□□ 2.1
LINC01554-202ENST00000436592 TRIM26Q12899 539 aaPredicted RBP28.08■■■□□ 2.09
LINC01554-202ENST00000436592 BIVM-ERCC5R4GMW8 1640 aa28.07■■■□□ 2.08
LINC01554-202ENST00000436592 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
LINC01554-202ENST00000436592 TNIKQ9UKE5 1360 aa28.02■■■□□ 2.08
LINC01554-202ENST00000436592 CUX1P39880 1505 aa28.01■■■□□ 2.07
LINC01554-202ENST00000436592 GOLGA3Q08378 1498 aa27.97■■■□□ 2.07
LINC01554-202ENST00000436592 UBTFP17480 764 aaKnown RBP27.96■■■□□ 2.07
LINC01554-202ENST00000436592 PRDM2Q13029 1718 aa27.96■■■□□ 2.07
LINC01554-202ENST00000436592 CEP162Q5TB80 1403 aa27.94■■■□□ 2.06
LINC01554-202ENST00000436592 CEP164Q9UPV0 1460 aa27.91■■■□□ 2.06
LINC01554-202ENST00000436592 KIF21BO75037 1637 aa27.89■■■□□ 2.06
LINC01554-202ENST00000436592 HRCP23327 699 aa27.88■■■□□ 2.05
LINC01554-202ENST00000436592 PPARGC1BQ86YN6 1023 aaKnown RBP27.77■■■□□ 2.04
LINC01554-202ENST00000436592 RAPGEF2Q9Y4G8 1499 aa27.77■■■□□ 2.04
LINC01554-202ENST00000436592 FANCD2Q9BXW9 1451 aa27.73■■■□□ 2.03
LINC01554-202ENST00000436592 NESP48681 1621 aa27.71■■■□□ 2.03
LINC01554-202ENST00000436592 KIF27Q86VH2 1401 aa27.7■■■□□ 2.03
LINC01554-202ENST00000436592 DNAJC5BQ9UF47 199 aa27.68■■■□□ 2.02
LINC01554-202ENST00000436592 PRXQ9BXM0 1461 aa27.66■■■□□ 2.02
LINC01554-202ENST00000436592 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
LINC01554-202ENST00000436592 ERICH3Q5RHP9 1530 aa27.6■■■□□ 2.01
LINC01554-202ENST00000436592 CLIP1P30622 1438 aa27.59■■■□□ 2.01
LINC01554-202ENST00000436592 LAMC3Q9Y6N6 1575 aa27.56■■■□□ 2
LINC01554-202ENST00000436592 CUX2O14529 1486 aa27.56■■■□□ 2
LINC01554-202ENST00000436592 DNMBPQ6XZF7 1577 aa27.51■■□□□ 1.99
LINC01554-202ENST00000436592 IGF1RP08069 1367 aa27.48■■□□□ 1.99
LINC01554-202ENST00000436592 TOPBP1Q92547 1522 aa27.48■■□□□ 1.99
LINC01554-202ENST00000436592 RANGAP1P46060 587 aaPredicted RBP27.48■■□□□ 1.99
LINC01554-202ENST00000436592 TTBK1Q5TCY1 1321 aaPredicted RBP27.44■■□□□ 1.98
LINC01554-202ENST00000436592 POLA1P09884 1462 aaPredicted RBP27.4■■□□□ 1.98
LINC01554-202ENST00000436592 VPS8Q8N3P4 1428 aa27.4■■□□□ 1.98
LINC01554-202ENST00000436592 PDS5BQ9NTI5 1447 aa27.4■■□□□ 1.98
LINC01554-202ENST00000436592 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
LINC01554-202ENST00000436592 URB2Q14146 1524 aaKnown RBP27.37■■□□□ 1.97
LINC01554-202ENST00000436592 CARMIL1Q5VZK9 1371 aa27.33■■□□□ 1.97
LINC01554-202ENST00000436592 ABCA10Q8WWZ4 1543 aa27.33■■□□□ 1.97
LINC01554-202ENST00000436592 KIF21AQ7Z4S6 1674 aa27.26■■□□□ 1.95
LINC01554-202ENST00000436592 ARAP1Q96P48 1450 aa27.26■■□□□ 1.95
LINC01554-202ENST00000436592 APLP2Q06481 763 aa27.19■■□□□ 1.94
LINC01554-202ENST00000436592 ARHGAP35Q9NRY4 1499 aa27.16■■□□□ 1.94
LINC01554-202ENST00000436592 ZEB1P37275 1124 aaPredicted RBP27.15■■□□□ 1.94
LINC01554-202ENST00000436592 WDR97A6NE52 1622 aa27.14■■□□□ 1.93
LINC01554-202ENST00000436592 TDRD9Q8NDG6 1382 aaKnown RBP27.1■■□□□ 1.93
LINC01554-202ENST00000436592 CUL7Q14999 1698 aa27.05■■□□□ 1.92
LINC01554-202ENST00000436592 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
LINC01554-202ENST00000436592 GAPVD1Q14C86 1478 aa27.02■■□□□ 1.92
LINC01554-202ENST00000436592 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.02■■□□□ 1.92
LINC01554-202ENST00000436592 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
LINC01554-202ENST00000436592 TARBP1Q13395 1621 aaKnown RBP27■■□□□ 1.91
LINC01554-202ENST00000436592 KANK4Q5T7N3 995 aaPredicted RBP26.96■■□□□ 1.91
LINC01554-202ENST00000436592 CCER1Q8TC90 406 aaPredicted RBP26.93■■□□□ 1.9
LINC01554-202ENST00000436592 P3H3Q8IVL6 736 aa26.86■■□□□ 1.89
LINC01554-202ENST00000436592 CTTNBP2Q8WZ74 1663 aa26.85■■□□□ 1.89
LINC01554-202ENST00000436592 HNRNPUL2Q1KMD3 747 aaKnown RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms