RNA–Protein interactions for RNA: ENST00000435991.2

TRAPPC13P1-201, Transcript of trafficking protein particle complex 13 pseudogene 1, humanhuman

BASIC

Gene TRAPPC13P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13P1-201ENST00000435991 AEBP2Q6ZN18 517 aaPredicted RBP29.7■■■□□ 2.35
TRAPPC13P1-201ENST00000435991 CHIC1Q5VXU3 224 aa28.43■■■□□ 2.14
TRAPPC13P1-201ENST00000435991 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.65
TRAPPC13P1-201ENST00000435991 PHF23Q9BUL5 403 aaPredicted RBP25■■□□□ 1.59
TRAPPC13P1-201ENST00000435991 FOXD1Q16676 465 aa23.56■■□□□ 1.36
TRAPPC13P1-201ENST00000435991 PLPPR3Q6T4P5 718 aa22.8■■□□□ 1.24
TRAPPC13P1-201ENST00000435991 PPP6R1Q9UPN7 881 aa22.16■■□□□ 1.14
TRAPPC13P1-201ENST00000435991 ADRA2BP18089 450 aa22.08■■□□□ 1.13
TRAPPC13P1-201ENST00000435991 PIAS4Q8N2W9 510 aaPredicted RBP22.05■■□□□ 1.12
TRAPPC13P1-201ENST00000435991 MSH5O43196 834 aa22.01■■□□□ 1.11
TRAPPC13P1-201ENST00000435991 POTEDQ86YR6 584 aa21.12■□□□□ 0.97
TRAPPC13P1-201ENST00000435991 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.83
TRAPPC13P1-201ENST00000435991 MAPK8IP2Q13387 824 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC13P1-201ENST00000435991 DMRT2Q9Y5R5 561 aa20.13■□□□□ 0.81
TRAPPC13P1-201ENST00000435991 PPP4R3CPQ6ZMV5 832 aa19.99■□□□□ 0.79
TRAPPC13P1-201ENST00000435991 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
TRAPPC13P1-201ENST00000435991 HOXD11P31277 338 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC13P1-201ENST00000435991 RNF216Q9NWF9 866 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC13P1-201ENST00000435991 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
TRAPPC13P1-201ENST00000435991 DCAF8L1A6NGE4 600 aa19.2■□□□□ 0.66
TRAPPC13P1-201ENST00000435991 NPM3O75607 178 aaKnown RBP19■□□□□ 0.63
TRAPPC13P1-201ENST00000435991 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
TRAPPC13P1-201ENST00000435991 KCNA4P22459 653 aa18.79■□□□□ 0.6
TRAPPC13P1-201ENST00000435991 RNF39Q9H2S5 420 aa18.79■□□□□ 0.6
TRAPPC13P1-201ENST00000435991 CACNB1Q02641 598 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC13P1-201ENST00000435991 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
TRAPPC13P1-201ENST00000435991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRAPPC13P1-201ENST00000435991 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC13P1-201ENST00000435991 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
TRAPPC13P1-201ENST00000435991 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC13P1-201ENST00000435991 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
TRAPPC13P1-201ENST00000435991 CAPN15O75808 1086 aa17.76■□□□□ 0.43
TRAPPC13P1-201ENST00000435991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC13P1-201ENST00000435991 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
TRAPPC13P1-201ENST00000435991 APLP2Q06481 763 aa17.71■□□□□ 0.43
TRAPPC13P1-201ENST00000435991 DSG3P32926 999 aa17.66■□□□□ 0.42
TRAPPC13P1-201ENST00000435991 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC13P1-201ENST00000435991 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC13P1-201ENST00000435991 ZNF219Q9P2Y4 722 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC13P1-201ENST00000435991 FOXD4L1Q9NU39 408 aa17.52■□□□□ 0.4
TRAPPC13P1-201ENST00000435991 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC13P1-201ENST00000435991 ABCB7O75027 752 aa17.35■□□□□ 0.37
TRAPPC13P1-201ENST00000435991 ZBTB22O15209 634 aa17.28■□□□□ 0.36
TRAPPC13P1-201ENST00000435991 ATF5Q9Y2D1 282 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC13P1-201ENST00000435991 POLA2Q14181 598 aa17.11■□□□□ 0.33
TRAPPC13P1-201ENST00000435991 ATXN8OSP0DMR3 200 aa16.99■□□□□ 0.31
TRAPPC13P1-201ENST00000435991 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
TRAPPC13P1-201ENST00000435991 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC13P1-201ENST00000435991 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
TRAPPC13P1-201ENST00000435991 POTEHQ6S545 545 aa16.59■□□□□ 0.25
TRAPPC13P1-201ENST00000435991 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
TRAPPC13P1-201ENST00000435991 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
TRAPPC13P1-201ENST00000435991 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
TRAPPC13P1-201ENST00000435991 FBLN2P98095 1184 aa16.47■□□□□ 0.23
TRAPPC13P1-201ENST00000435991 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
TRAPPC13P1-201ENST00000435991 MKRN4PQ13434 485 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC13P1-201ENST00000435991 REM2Q8IYK8 340 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC13P1-201ENST00000435991 SPDYE2BA6NHP3 402 aa16.32■□□□□ 0.2
TRAPPC13P1-201ENST00000435991 SPDYE6P0CI01 402 aa16.32■□□□□ 0.2
TRAPPC13P1-201ENST00000435991 SPDYE2Q495Y8 402 aa16.32■□□□□ 0.2
TRAPPC13P1-201ENST00000435991 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
TRAPPC13P1-201ENST00000435991 SSUH2Q9Y2M2 353 aa16.13■□□□□ 0.17
TRAPPC13P1-201ENST00000435991 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC13P1-201ENST00000435991 PIP4P2Q8N4L2 257 aa16.03■□□□□ 0.16
TRAPPC13P1-201ENST00000435991 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
TRAPPC13P1-201ENST00000435991 SPDYE1Q8NFV5 336 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC13P1-201ENST00000435991 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
TRAPPC13P1-201ENST00000435991 CLEC11AQ9Y240 323 aa15.88■□□□□ 0.13
TRAPPC13P1-201ENST00000435991 PRKAR2AP13861 404 aaKnown RBP15.73■□□□□ 0.11
TRAPPC13P1-201ENST00000435991 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
TRAPPC13P1-201ENST00000435991 PRR29P0C7W0 189 aa15.68■□□□□ 0.1
TRAPPC13P1-201ENST00000435991 HAX1O00165 279 aa15.66■□□□□ 0.1
TRAPPC13P1-201ENST00000435991 SP7Q8TDD2 431 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC13P1-201ENST00000435991 CHADLQ6NUI6 762 aa15.57■□□□□ 0.08
TRAPPC13P1-201ENST00000435991 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
TRAPPC13P1-201ENST00000435991 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
TRAPPC13P1-201ENST00000435991 EVX2Q03828 476 aa15.48■□□□□ 0.07
TRAPPC13P1-201ENST00000435991 PROM2Q8N271 834 aa15.4■□□□□ 0.06
TRAPPC13P1-201ENST00000435991 FARP1Q9Y4F1 1045 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC13P1-201ENST00000435991 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
TRAPPC13P1-201ENST00000435991 CD44P16070 742 aaKnown RBP15.24■□□□□ 0.03
TRAPPC13P1-201ENST00000435991 GABBR2O75899 941 aa15.17■□□□□ 0.02
TRAPPC13P1-201ENST00000435991 MNX1P50219 401 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC13P1-201ENST00000435991 NPM1P06748 294 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRAPPC13P1-201ENST00000435991 FKBP8Q14318 412 aa15.09■□□□□ 0.01
TRAPPC13P1-201ENST00000435991 CLCN6P51797 869 aa15.08■□□□□ 0
TRAPPC13P1-201ENST00000435991 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
TRAPPC13P1-201ENST00000435991 ZRANB1Q9UGI0 708 aa15.05■□□□□ -0
TRAPPC13P1-201ENST00000435991 PAK3O75914 559 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC13P1-201ENST00000435991 PLEKHG5O94827 1062 aa14.93□□□□□ -0.02
TRAPPC13P1-201ENST00000435991 MIER1Q8N108 512 aa14.92□□□□□ -0.02
TRAPPC13P1-201ENST00000435991 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
TRAPPC13P1-201ENST00000435991 PLCD3Q8N3E9 789 aa14.84□□□□□ -0.03
TRAPPC13P1-201ENST00000435991 PHF12Q96QT6 1004 aa14.84□□□□□ -0.03
TRAPPC13P1-201ENST00000435991 GALR2O43603 387 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC13P1-201ENST00000435991 DCBLD2Q96PD2 775 aa14.79□□□□□ -0.04
TRAPPC13P1-201ENST00000435991 TSPYL2Q9H2G4 693 aaPredicted RBP14.77□□□□□ -0.05
TRAPPC13P1-201ENST00000435991 ZBTB47Q9UFB7 747 aaPredicted RBP14.77□□□□□ -0.05
TRAPPC13P1-201ENST00000435991 FBXO3Q9UK99 471 aa14.77□□□□□ -0.05
TRAPPC13P1-201ENST00000435991 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms