RNA–Protein interactions for RNA: ENST00000435889.1

RPS3AP38-201, Transcript of ribosomal protein S3a pseudogene 38, humanhuman

BASIC

Gene RPS3AP38, Length 763 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP38-201ENST00000435889 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
RPS3AP38-201ENST00000435889 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
RPS3AP38-201ENST00000435889 PHF23Q9BUL5 403 aaPredicted RBP15.34■□□□□ 0.05
RPS3AP38-201ENST00000435889 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
RPS3AP38-201ENST00000435889 PLPPR3Q6T4P5 718 aa14.23□□□□□ -0.13
RPS3AP38-201ENST00000435889 FOXD1Q16676 465 aa13.8□□□□□ -0.2
RPS3AP38-201ENST00000435889 ADRA2BP18089 450 aa13.48□□□□□ -0.25
RPS3AP38-201ENST00000435889 PPP6R1Q9UPN7 881 aa13.46□□□□□ -0.25
RPS3AP38-201ENST00000435889 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
RPS3AP38-201ENST00000435889 NISCHQ9Y2I1 1504 aa12.87□□□□□ -0.35
RPS3AP38-201ENST00000435889 MSH5O43196 834 aa12.63□□□□□ -0.39
RPS3AP38-201ENST00000435889 PPP4R3CPQ6ZMV5 832 aa12.59□□□□□ -0.39
RPS3AP38-201ENST00000435889 KCNA4P22459 653 aa12.55□□□□□ -0.4
RPS3AP38-201ENST00000435889 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
RPS3AP38-201ENST00000435889 SCAF1Q9H7N4 1312 aaKnown RBP12.31□□□□□ -0.44
RPS3AP38-201ENST00000435889 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
RPS3AP38-201ENST00000435889 MAPK8IP2Q13387 824 aaPredicted RBP12.16□□□□□ -0.46
RPS3AP38-201ENST00000435889 NPM3O75607 178 aaKnown RBP12.13□□□□□ -0.47
RPS3AP38-201ENST00000435889 SLC4A1APQ9BWU0 796 aaKnown RBP11.99□□□□□ -0.49
RPS3AP38-201ENST00000435889 DMRT2Q9Y5R5 561 aa11.93□□□□□ -0.5
RPS3AP38-201ENST00000435889 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
RPS3AP38-201ENST00000435889 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
RPS3AP38-201ENST00000435889 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
RPS3AP38-201ENST00000435889 DNAJC5BQ9UF47 199 aa11.71□□□□□ -0.53
RPS3AP38-201ENST00000435889 CSRNP3Q8WYN3 585 aa11.67□□□□□ -0.54
RPS3AP38-201ENST00000435889 ZBTB22O15209 634 aa11.55□□□□□ -0.56
RPS3AP38-201ENST00000435889 FOXD4L1Q9NU39 408 aa11.48□□□□□ -0.57
RPS3AP38-201ENST00000435889 CCDC180Q9P1Z9 1646 aa11.44□□□□□ -0.58
RPS3AP38-201ENST00000435889 DCAF8L1A6NGE4 600 aa11.42□□□□□ -0.58
RPS3AP38-201ENST00000435889 SLC4A2P04920 1241 aa11.4□□□□□ -0.58
RPS3AP38-201ENST00000435889 POTEDQ86YR6 584 aa11.33□□□□□ -0.6
RPS3AP38-201ENST00000435889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.23□□□□□ -0.61
RPS3AP38-201ENST00000435889 MYCNP04198 464 aaPredicted RBP11.2□□□□□ -0.62
RPS3AP38-201ENST00000435889 ABCC9O60706 1549 aa11.13□□□□□ -0.63
RPS3AP38-201ENST00000435889 U3KPZ7 1027 aaPredicted RBP11.07□□□□□ -0.64
RPS3AP38-201ENST00000435889 ATXN8OSP0DMR3 200 aa11.05□□□□□ -0.64
RPS3AP38-201ENST00000435889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.99□□□□□ -0.65
RPS3AP38-201ENST00000435889 HNRNPUL2Q1KMD3 747 aaKnown RBP10.99□□□□□ -0.65
RPS3AP38-201ENST00000435889 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
RPS3AP38-201ENST00000435889 ATF5Q9Y2D1 282 aaPredicted RBP10.9□□□□□ -0.66
RPS3AP38-201ENST00000435889 MYO15BQ96JP2 1530 aa10.85□□□□□ -0.67
RPS3AP38-201ENST00000435889 RNF39Q9H2S5 420 aa10.85□□□□□ -0.67
RPS3AP38-201ENST00000435889 APLP2Q06481 763 aa10.83□□□□□ -0.68
RPS3AP38-201ENST00000435889 NACADO15069 1562 aa10.81□□□□□ -0.68
RPS3AP38-201ENST00000435889 RB1CC1Q8TDY2 1594 aa10.78□□□□□ -0.68
RPS3AP38-201ENST00000435889 DCAF1Q9Y4B6 1507 aa10.75□□□□□ -0.69
RPS3AP38-201ENST00000435889 C1QBPQ07021 282 aaKnown RBP10.73□□□□□ -0.69
RPS3AP38-201ENST00000435889 ZCCHC6Q5VYS8 1495 aaKnown RBP10.73□□□□□ -0.69
RPS3AP38-201ENST00000435889 SPINK5Q9NQ38 1064 aaPredicted RBP10.7□□□□□ -0.7
RPS3AP38-201ENST00000435889 ZNF219Q9P2Y4 722 aaPredicted RBP10.7□□□□□ -0.7
RPS3AP38-201ENST00000435889 TRHP20396 242 aaPredicted RBP10.65□□□□□ -0.7
RPS3AP38-201ENST00000435889 CAPN15O75808 1086 aa10.64□□□□□ -0.71
RPS3AP38-201ENST00000435889 SHROOM4Q9ULL8 1493 aa10.61□□□□□ -0.71
RPS3AP38-201ENST00000435889 DCAF8L2P0C7V8 631 aa10.59□□□□□ -0.71
RPS3AP38-201ENST00000435889 FKBP8Q14318 412 aa10.54□□□□□ -0.72
RPS3AP38-201ENST00000435889 POLA2Q14181 598 aa10.53□□□□□ -0.72
RPS3AP38-201ENST00000435889 ABCB7O75027 752 aa10.48□□□□□ -0.73
RPS3AP38-201ENST00000435889 MKRN4PQ13434 485 aaPredicted RBP10.43□□□□□ -0.74
RPS3AP38-201ENST00000435889 BICRAQ9NZM4 1560 aa10.43□□□□□ -0.74
RPS3AP38-201ENST00000435889 FBLN2P98095 1184 aa10.42□□□□□ -0.74
RPS3AP38-201ENST00000435889 CACNB1Q02641 598 aaPredicted RBP10.42□□□□□ -0.74
RPS3AP38-201ENST00000435889 DSG3P32926 999 aa10.4□□□□□ -0.74
RPS3AP38-201ENST00000435889 PABPN1Q86U42 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
RPS3AP38-201ENST00000435889 UNC13AQ9UPW8 1703 aa10.36□□□□□ -0.75
RPS3AP38-201ENST00000435889 SUPT5HO00267 1087 aaKnown RBP10.36□□□□□ -0.75
RPS3AP38-201ENST00000435889 ZBTB12Q9Y330 459 aaPredicted RBP10.35□□□□□ -0.75
RPS3AP38-201ENST00000435889 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
RPS3AP38-201ENST00000435889 SCRIBQ14160 1630 aa10.31□□□□□ -0.76
RPS3AP38-201ENST00000435889 OSCARQ8IYS5 282 aa10.16□□□□□ -0.78
RPS3AP38-201ENST00000435889 EIF4G1Q04637 1599 aaKnown RBP10.16□□□□□ -0.78
RPS3AP38-201ENST00000435889 PROM2Q8N271 834 aa10.15□□□□□ -0.78
RPS3AP38-201ENST00000435889 SPDYE2BA6NHP3 402 aa10.1□□□□□ -0.79
RPS3AP38-201ENST00000435889 SPDYE6P0CI01 402 aa10.1□□□□□ -0.79
RPS3AP38-201ENST00000435889 SPDYE2Q495Y8 402 aa10.1□□□□□ -0.79
RPS3AP38-201ENST00000435889 ZNF692Q9BU19 519 aaPredicted RBP10.1□□□□□ -0.79
RPS3AP38-201ENST00000435889 FBXO3Q9UK99 471 aa10.09□□□□□ -0.79
RPS3AP38-201ENST00000435889 CC2D2AQ9P2K1 1620 aa10.08□□□□□ -0.8
RPS3AP38-201ENST00000435889 CECR2Q9BXF3 1484 aa10.06□□□□□ -0.8
RPS3AP38-201ENST00000435889 SSUH2Q9Y2M2 353 aa10.04□□□□□ -0.8
RPS3AP38-201ENST00000435889 NCAPD3P42695 1498 aa10.01□□□□□ -0.81
RPS3AP38-201ENST00000435889 AMER1Q5JTC6 1135 aaPredicted RBP9.99□□□□□ -0.81
RPS3AP38-201ENST00000435889 BAZ1AQ9NRL2 1556 aaPredicted RBP9.98□□□□□ -0.81
RPS3AP38-201ENST00000435889 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
RPS3AP38-201ENST00000435889 VASPP50552 380 aaPredicted RBP9.96□□□□□ -0.82
RPS3AP38-201ENST00000435889 RSF1Q96T23 1441 aaPredicted RBP9.96□□□□□ -0.82
RPS3AP38-201ENST00000435889 ATAD2BQ9ULI0 1458 aa9.95□□□□□ -0.82
RPS3AP38-201ENST00000435889 PEG3Q9GZU2 1588 aa9.95□□□□□ -0.82
RPS3AP38-201ENST00000435889 SMARCA2P51531 1590 aa9.94□□□□□ -0.82
RPS3AP38-201ENST00000435889 SMARCA4P51532 1647 aa9.93□□□□□ -0.82
RPS3AP38-201ENST00000435889 HMGXB3Q12766 1538 aa9.92□□□□□ -0.82
RPS3AP38-201ENST00000435889 RBM42Q9BTD8 480 aaKnown RBP9.9□□□□□ -0.82
RPS3AP38-201ENST00000435889 STAG3Q9UJ98 1225 aa9.87□□□□□ -0.83
RPS3AP38-201ENST00000435889 MROH2BQ7Z745 1585 aa9.86□□□□□ -0.83
RPS3AP38-201ENST00000435889 IFNLR1Q8IU57 520 aaPredicted RBP9.83□□□□□ -0.84
RPS3AP38-201ENST00000435889 AKT1S1Q96B36 256 aa9.83□□□□□ -0.84
RPS3AP38-201ENST00000435889 BAZ1BQ9UIG0 1483 aaKnown RBP9.83□□□□□ -0.84
RPS3AP38-201ENST00000435889 PLCD3Q8N3E9 789 aa9.78□□□□□ -0.84
RPS3AP38-201ENST00000435889 MIER1Q8N108 512 aa9.76□□□□□ -0.85
RPS3AP38-201ENST00000435889 SPDYE1Q8NFV5 336 aaPredicted RBP9.76□□□□□ -0.85
RPS3AP38-201ENST00000435889 REM2Q8IYK8 340 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms