RNA–Protein interactions for RNA: ENST00000435034.5

TMEM38B-204, Transcript of transmembrane protein 38B, humanhuman

TSL 3

Gene TMEM38B, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-204ENST00000435034 AEBP2Q6ZN18 517 aaPredicted RBP23.21■■□□□ 1.31
TMEM38B-204ENST00000435034 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
TMEM38B-204ENST00000435034 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
TMEM38B-204ENST00000435034 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
TMEM38B-204ENST00000435034 FOXD1Q16676 465 aa18.32■□□□□ 0.52
TMEM38B-204ENST00000435034 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
TMEM38B-204ENST00000435034 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
TMEM38B-204ENST00000435034 ADRA2BP18089 450 aa17.36■□□□□ 0.37
TMEM38B-204ENST00000435034 PIAS4Q8N2W9 510 aaPredicted RBP17.16■□□□□ 0.34
TMEM38B-204ENST00000435034 MSH5O43196 834 aa16.95■□□□□ 0.3
TMEM38B-204ENST00000435034 POTEDQ86YR6 584 aa15.97■□□□□ 0.15
TMEM38B-204ENST00000435034 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
TMEM38B-204ENST00000435034 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
TMEM38B-204ENST00000435034 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
TMEM38B-204ENST00000435034 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
TMEM38B-204ENST00000435034 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
TMEM38B-204ENST00000435034 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
TMEM38B-204ENST00000435034 HOXD11P31277 338 aaPredicted RBP15.26■□□□□ 0.03
TMEM38B-204ENST00000435034 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
TMEM38B-204ENST00000435034 KCNA4P22459 653 aa15.16■□□□□ 0.02
TMEM38B-204ENST00000435034 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
TMEM38B-204ENST00000435034 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
TMEM38B-204ENST00000435034 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
TMEM38B-204ENST00000435034 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
TMEM38B-204ENST00000435034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.09
TMEM38B-204ENST00000435034 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
TMEM38B-204ENST00000435034 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
TMEM38B-204ENST00000435034 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
TMEM38B-204ENST00000435034 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
TMEM38B-204ENST00000435034 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
TMEM38B-204ENST00000435034 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
TMEM38B-204ENST00000435034 ZBTB22O15209 634 aa13.99□□□□□ -0.17
TMEM38B-204ENST00000435034 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
TMEM38B-204ENST00000435034 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
TMEM38B-204ENST00000435034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
TMEM38B-204ENST00000435034 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
TMEM38B-204ENST00000435034 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
TMEM38B-204ENST00000435034 CAPN15O75808 1086 aa13.84□□□□□ -0.19
TMEM38B-204ENST00000435034 APLP2Q06481 763 aa13.81□□□□□ -0.2
TMEM38B-204ENST00000435034 DSG3P32926 999 aa13.75□□□□□ -0.21
TMEM38B-204ENST00000435034 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
TMEM38B-204ENST00000435034 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
TMEM38B-204ENST00000435034 ATF5Q9Y2D1 282 aaPredicted RBP13.66□□□□□ -0.22
TMEM38B-204ENST00000435034 CSRNP3Q8WYN3 585 aa13.65□□□□□ -0.22
TMEM38B-204ENST00000435034 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
TMEM38B-204ENST00000435034 ABCB7O75027 752 aa13.58□□□□□ -0.24
TMEM38B-204ENST00000435034 ATXN8OSP0DMR3 200 aa13.55□□□□□ -0.24
TMEM38B-204ENST00000435034 POLA2Q14181 598 aa13.45□□□□□ -0.26
TMEM38B-204ENST00000435034 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
TMEM38B-204ENST00000435034 MKRN4PQ13434 485 aaPredicted RBP13.05□□□□□ -0.32
TMEM38B-204ENST00000435034 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
TMEM38B-204ENST00000435034 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
TMEM38B-204ENST00000435034 FBLN2P98095 1184 aa12.99□□□□□ -0.33
TMEM38B-204ENST00000435034 NISCHQ9Y2I1 1504 aa12.93□□□□□ -0.34
TMEM38B-204ENST00000435034 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
TMEM38B-204ENST00000435034 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
TMEM38B-204ENST00000435034 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
TMEM38B-204ENST00000435034 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
TMEM38B-204ENST00000435034 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
TMEM38B-204ENST00000435034 SSUH2Q9Y2M2 353 aa12.74□□□□□ -0.37
TMEM38B-204ENST00000435034 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
TMEM38B-204ENST00000435034 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
TMEM38B-204ENST00000435034 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
TMEM38B-204ENST00000435034 POTEHQ6S545 545 aa12.57□□□□□ -0.4
TMEM38B-204ENST00000435034 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
TMEM38B-204ENST00000435034 PABPN1Q86U42 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
TMEM38B-204ENST00000435034 SPDYE1Q8NFV5 336 aaPredicted RBP12.49□□□□□ -0.41
TMEM38B-204ENST00000435034 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
TMEM38B-204ENST00000435034 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
TMEM38B-204ENST00000435034 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
TMEM38B-204ENST00000435034 PROM2Q8N271 834 aa12.39□□□□□ -0.43
TMEM38B-204ENST00000435034 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
TMEM38B-204ENST00000435034 FKBP8Q14318 412 aa12.3□□□□□ -0.44
TMEM38B-204ENST00000435034 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
TMEM38B-204ENST00000435034 STAG3Q9UJ98 1225 aa12.26□□□□□ -0.45
TMEM38B-204ENST00000435034 CHADLQ6NUI6 762 aa12.21□□□□□ -0.45
TMEM38B-204ENST00000435034 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
TMEM38B-204ENST00000435034 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
TMEM38B-204ENST00000435034 HAX1O00165 279 aa12.05□□□□□ -0.48
TMEM38B-204ENST00000435034 C19orf67A6NJJ6 358 aa12.02□□□□□ -0.49
TMEM38B-204ENST00000435034 EVX2Q03828 476 aa12.02□□□□□ -0.49
TMEM38B-204ENST00000435034 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
TMEM38B-204ENST00000435034 SP7Q8TDD2 431 aaPredicted RBP11.95□□□□□ -0.5
TMEM38B-204ENST00000435034 MIER1Q8N108 512 aa11.9□□□□□ -0.5
TMEM38B-204ENST00000435034 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
TMEM38B-204ENST00000435034 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
TMEM38B-204ENST00000435034 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
TMEM38B-204ENST00000435034 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
TMEM38B-204ENST00000435034 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
TMEM38B-204ENST00000435034 VASPP50552 380 aaPredicted RBP11.8□□□□□ -0.52
TMEM38B-204ENST00000435034 ZRANB1Q9UGI0 708 aa11.77□□□□□ -0.53
TMEM38B-204ENST00000435034 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
TMEM38B-204ENST00000435034 GABBR2O75899 941 aa11.74□□□□□ -0.53
TMEM38B-204ENST00000435034 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
TMEM38B-204ENST00000435034 RASEFQ8IZ41 740 aa11.71□□□□□ -0.53
TMEM38B-204ENST00000435034 NUBP1P53384 320 aa11.7□□□□□ -0.54
TMEM38B-204ENST00000435034 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
TMEM38B-204ENST00000435034 PHF12Q96QT6 1004 aa11.66□□□□□ -0.54
TMEM38B-204ENST00000435034 TSPYL2Q9H2G4 693 aaPredicted RBP11.66□□□□□ -0.54
TMEM38B-204ENST00000435034 CCDC61Q9Y6R9 512 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms