RNA–Protein interactions for RNA: ENST00000434887.1

AC006004.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC006004.1, Length 2,145 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006004.1-201ENST00000434887 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
AC006004.1-201ENST00000434887 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
AC006004.1-201ENST00000434887 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
AC006004.1-201ENST00000434887 CCDC180Q9P1Z9 1646 aa19.86■□□□□ 0.77
AC006004.1-201ENST00000434887 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
AC006004.1-201ENST00000434887 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
AC006004.1-201ENST00000434887 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
AC006004.1-201ENST00000434887 SHROOM4Q9ULL8 1493 aa19.2■□□□□ 0.66
AC006004.1-201ENST00000434887 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
AC006004.1-201ENST00000434887 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.6
AC006004.1-201ENST00000434887 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
AC006004.1-201ENST00000434887 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
AC006004.1-201ENST00000434887 ABCC9O60706 1549 aa18.38■□□□□ 0.53
AC006004.1-201ENST00000434887 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
AC006004.1-201ENST00000434887 NACADO15069 1562 aa18.28■□□□□ 0.52
AC006004.1-201ENST00000434887 FOXD1Q16676 465 aa18.25■□□□□ 0.51
AC006004.1-201ENST00000434887 RSF1Q96T23 1441 aaPredicted RBP18.04■□□□□ 0.48
AC006004.1-201ENST00000434887 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
AC006004.1-201ENST00000434887 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
AC006004.1-201ENST00000434887 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.45
AC006004.1-201ENST00000434887 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
AC006004.1-201ENST00000434887 WIZO95785 1651 aa17.78■□□□□ 0.44
AC006004.1-201ENST00000434887 BAZ1AQ9NRL2 1556 aaPredicted RBP17.73■□□□□ 0.43
AC006004.1-201ENST00000434887 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
AC006004.1-201ENST00000434887 LOC105371045A0A1W2PR82 267 aa17.56■□□□□ 0.4
AC006004.1-201ENST00000434887 EIF4G1Q04637 1599 aaKnown RBP17.54■□□□□ 0.4
AC006004.1-201ENST00000434887 TRIM41Q8WV44 630 aa17.54■□□□□ 0.4
AC006004.1-201ENST00000434887 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
AC006004.1-201ENST00000434887 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
AC006004.1-201ENST00000434887 SMARCA2P51531 1590 aa17.41■□□□□ 0.38
AC006004.1-201ENST00000434887 PCGF6Q9BYE7 350 aa17.4■□□□□ 0.38
AC006004.1-201ENST00000434887 HRCP23327 699 aa17.37■□□□□ 0.37
AC006004.1-201ENST00000434887 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
AC006004.1-201ENST00000434887 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
AC006004.1-201ENST00000434887 POTEDQ86YR6 584 aa17.31■□□□□ 0.36
AC006004.1-201ENST00000434887 FAM9AQ8IZU1 332 aaPredicted RBP17.27■□□□□ 0.36
AC006004.1-201ENST00000434887 ABCC8Q09428 1581 aa17.24■□□□□ 0.35
AC006004.1-201ENST00000434887 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
AC006004.1-201ENST00000434887 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
AC006004.1-201ENST00000434887 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
AC006004.1-201ENST00000434887 MSH5O43196 834 aa17.08■□□□□ 0.33
AC006004.1-201ENST00000434887 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
AC006004.1-201ENST00000434887 EHMT2Q96KQ7 1210 aa17.03■□□□□ 0.32
AC006004.1-201ENST00000434887 EEA1Q15075 1411 aa17.03■□□□□ 0.32
AC006004.1-201ENST00000434887 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.31
AC006004.1-201ENST00000434887 PIAS4Q8N2W9 510 aaPredicted RBP16.97■□□□□ 0.31
AC006004.1-201ENST00000434887 SOGA1O94964 1423 aa16.96■□□□□ 0.31
AC006004.1-201ENST00000434887 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
AC006004.1-201ENST00000434887 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
AC006004.1-201ENST00000434887 PPARGC1BQ86YN6 1023 aaKnown RBP16.9■□□□□ 0.3
AC006004.1-201ENST00000434887 PPP6R1Q9UPN7 881 aa16.9■□□□□ 0.3
AC006004.1-201ENST00000434887 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
AC006004.1-201ENST00000434887 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
AC006004.1-201ENST00000434887 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
AC006004.1-201ENST00000434887 CEP162Q5TB80 1403 aa16.87■□□□□ 0.29
AC006004.1-201ENST00000434887 KIF21BO75037 1637 aa16.86■□□□□ 0.29
AC006004.1-201ENST00000434887 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
AC006004.1-201ENST00000434887 CSRNP3Q8WYN3 585 aa16.85■□□□□ 0.29
AC006004.1-201ENST00000434887 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
AC006004.1-201ENST00000434887 ZEB1P37275 1124 aaPredicted RBP16.83■□□□□ 0.28
AC006004.1-201ENST00000434887 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
AC006004.1-201ENST00000434887 NCAPD3P42695 1498 aa16.82■□□□□ 0.28
AC006004.1-201ENST00000434887 PRDM2Q13029 1718 aa16.81■□□□□ 0.28
AC006004.1-201ENST00000434887 ADRA2BP18089 450 aa16.81■□□□□ 0.28
AC006004.1-201ENST00000434887 CEP164Q9UPV0 1460 aa16.78■□□□□ 0.28
AC006004.1-201ENST00000434887 UBTFP17480 764 aaKnown RBP16.71■□□□□ 0.27
AC006004.1-201ENST00000434887 CFTRP13569 1480 aa16.64■□□□□ 0.25
AC006004.1-201ENST00000434887 CUX1P39880 1505 aa16.62■□□□□ 0.25
AC006004.1-201ENST00000434887 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
AC006004.1-201ENST00000434887 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
AC006004.1-201ENST00000434887 CLIP1P30622 1438 aa16.59■□□□□ 0.25
AC006004.1-201ENST00000434887 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
AC006004.1-201ENST00000434887 PRXQ9BXM0 1461 aa16.52■□□□□ 0.24
AC006004.1-201ENST00000434887 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.24
AC006004.1-201ENST00000434887 KIF27Q86VH2 1401 aa16.48■□□□□ 0.23
AC006004.1-201ENST00000434887 TTBK1Q5TCY1 1321 aaPredicted RBP16.48■□□□□ 0.23
AC006004.1-201ENST00000434887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
AC006004.1-201ENST00000434887 CCER1Q8TC90 406 aaPredicted RBP16.45■□□□□ 0.22
AC006004.1-201ENST00000434887 CADPSQ9ULU8 1353 aa16.43■□□□□ 0.22
AC006004.1-201ENST00000434887 ARAP1Q96P48 1450 aa16.38■□□□□ 0.21
AC006004.1-201ENST00000434887 APLP2Q06481 763 aa16.35■□□□□ 0.21
AC006004.1-201ENST00000434887 FGD5Q6ZNL6 1462 aa16.34■□□□□ 0.21
AC006004.1-201ENST00000434887 CUX2O14529 1486 aa16.33■□□□□ 0.2
AC006004.1-201ENST00000434887 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
AC006004.1-201ENST00000434887 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
AC006004.1-201ENST00000434887 RANGAP1P46060 587 aaPredicted RBP16.3■□□□□ 0.2
AC006004.1-201ENST00000434887 ARHGAP35Q9NRY4 1499 aa16.26■□□□□ 0.19
AC006004.1-201ENST00000434887 IGF1RP08069 1367 aa16.24■□□□□ 0.19
AC006004.1-201ENST00000434887 LAMC3Q9Y6N6 1575 aa16.23■□□□□ 0.19
AC006004.1-201ENST00000434887 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
AC006004.1-201ENST00000434887 TOPBP1Q92547 1522 aa16.2■□□□□ 0.18
AC006004.1-201ENST00000434887 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
AC006004.1-201ENST00000434887 CUL7Q14999 1698 aa16.2■□□□□ 0.18
AC006004.1-201ENST00000434887 HNRNPUL2Q1KMD3 747 aaKnown RBP16.19■□□□□ 0.18
AC006004.1-201ENST00000434887 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
AC006004.1-201ENST00000434887 CTTNBP2Q8WZ74 1663 aa16.18■□□□□ 0.18
AC006004.1-201ENST00000434887 NESP48681 1621 aa16.18■□□□□ 0.18
AC006004.1-201ENST00000434887 POLA1P09884 1462 aaPredicted RBP16.17■□□□□ 0.18
AC006004.1-201ENST00000434887 MAP3K1Q13233 1512 aa16.14■□□□□ 0.17
AC006004.1-201ENST00000434887 RRBP1Q9P2E9 1410 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms