RNA–Protein interactions for RNA: ENST00000433878.5

FYCO1-202, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

TSL 2

Gene FYCO1, Length 4,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-202ENST00000433878 NISCHQ9Y2I1 1504 aa17.97■□□□□ 0.47
FYCO1-202ENST00000433878 DCAF8L2P0C7V8 631 aa16.14■□□□□ 0.17
FYCO1-202ENST00000433878 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
FYCO1-202ENST00000433878 ABCC9O60706 1549 aa15.52■□□□□ 0.08
FYCO1-202ENST00000433878 SHROOM4Q9ULL8 1493 aa15.02■□□□□ -0
FYCO1-202ENST00000433878 RB1CC1Q8TDY2 1594 aa14.95□□□□□ -0.02
FYCO1-202ENST00000433878 ZCCHC6Q5VYS8 1495 aaKnown RBP14.92□□□□□ -0.02
FYCO1-202ENST00000433878 NACADO15069 1562 aa14.92□□□□□ -0.02
FYCO1-202ENST00000433878 PABPN1Q86U42 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
FYCO1-202ENST00000433878 DCAF1Q9Y4B6 1507 aa14.75□□□□□ -0.05
FYCO1-202ENST00000433878 MYO15BQ96JP2 1530 aa14.7□□□□□ -0.06
FYCO1-202ENST00000433878 SUPT5HO00267 1087 aaKnown RBP14.65□□□□□ -0.06
FYCO1-202ENST00000433878 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
FYCO1-202ENST00000433878 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
FYCO1-202ENST00000433878 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
FYCO1-202ENST00000433878 SMARCA2P51531 1590 aa13.96□□□□□ -0.17
FYCO1-202ENST00000433878 FAM9AQ8IZU1 332 aaPredicted RBP13.94□□□□□ -0.18
FYCO1-202ENST00000433878 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
FYCO1-202ENST00000433878 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
FYCO1-202ENST00000433878 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
FYCO1-202ENST00000433878 BICRAQ9NZM4 1560 aa13.84□□□□□ -0.19
FYCO1-202ENST00000433878 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
FYCO1-202ENST00000433878 ATAD2BQ9ULI0 1458 aa13.79□□□□□ -0.2
FYCO1-202ENST00000433878 SMARCA4P51532 1647 aa13.77□□□□□ -0.21
FYCO1-202ENST00000433878 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
FYCO1-202ENST00000433878 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
FYCO1-202ENST00000433878 ERCC6Q03468 1493 aa13.75□□□□□ -0.21
FYCO1-202ENST00000433878 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
FYCO1-202ENST00000433878 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
FYCO1-202ENST00000433878 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
FYCO1-202ENST00000433878 TOP2AP11388 1531 aaKnown RBP13.62□□□□□ -0.23
FYCO1-202ENST00000433878 CADPSQ9ULU8 1353 aa13.61□□□□□ -0.23
FYCO1-202ENST00000433878 DNAJC5BQ9UF47 199 aa13.59□□□□□ -0.23
FYCO1-202ENST00000433878 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
FYCO1-202ENST00000433878 WIZO95785 1651 aa13.53□□□□□ -0.24
FYCO1-202ENST00000433878 UBTFP17480 764 aaKnown RBP13.51□□□□□ -0.25
FYCO1-202ENST00000433878 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
FYCO1-202ENST00000433878 APLP2Q06481 763 aa13.5□□□□□ -0.25
FYCO1-202ENST00000433878 FBLN2P98095 1184 aa13.49□□□□□ -0.25
FYCO1-202ENST00000433878 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
FYCO1-202ENST00000433878 CEP164Q9UPV0 1460 aa13.45□□□□□ -0.26
FYCO1-202ENST00000433878 CHIC1Q5VXU3 224 aa13.44□□□□□ -0.26
FYCO1-202ENST00000433878 ABCC8Q09428 1581 aa13.42□□□□□ -0.26
FYCO1-202ENST00000433878 PEG3Q9GZU2 1588 aa13.42□□□□□ -0.26
FYCO1-202ENST00000433878 WRNQ14191 1432 aaPredicted RBP eCLIP13.41□□□□□ -0.26
FYCO1-202ENST00000433878 FANCD2Q9BXW9 1451 aa13.39□□□□□ -0.27
FYCO1-202ENST00000433878 CHMP7Q8WUX9 453 aaPredicted RBP13.36□□□□□ -0.27
FYCO1-202ENST00000433878 RANGAP1P46060 587 aaPredicted RBP13.35□□□□□ -0.27
FYCO1-202ENST00000433878 CFTRP13569 1480 aa13.32□□□□□ -0.28
FYCO1-202ENST00000433878 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
FYCO1-202ENST00000433878 ATP1B4Q9UN42 357 aaPredicted RBP13.31□□□□□ -0.28
FYCO1-202ENST00000433878 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
FYCO1-202ENST00000433878 KIF27Q86VH2 1401 aa13.27□□□□□ -0.28
FYCO1-202ENST00000433878 SOGA1O94964 1423 aa13.26□□□□□ -0.29
FYCO1-202ENST00000433878 MRC2Q9UBG0 1479 aa13.26□□□□□ -0.29
FYCO1-202ENST00000433878 EEA1Q15075 1411 aa13.24□□□□□ -0.29
FYCO1-202ENST00000433878 TTBK1Q5TCY1 1321 aaPredicted RBP13.22□□□□□ -0.29
FYCO1-202ENST00000433878 NESP48681 1621 aa13.22□□□□□ -0.29
FYCO1-202ENST00000433878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.22□□□□□ -0.29
FYCO1-202ENST00000433878 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
FYCO1-202ENST00000433878 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
FYCO1-202ENST00000433878 CUX2O14529 1486 aa13.17□□□□□ -0.3
FYCO1-202ENST00000433878 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
FYCO1-202ENST00000433878 IFT140Q96RY7 1462 aa13.12□□□□□ -0.31
FYCO1-202ENST00000433878 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
FYCO1-202ENST00000433878 FGD5Q6ZNL6 1462 aa13.06□□□□□ -0.32
FYCO1-202ENST00000433878 CARMIL1Q5VZK9 1371 aa13.06□□□□□ -0.32
FYCO1-202ENST00000433878 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
FYCO1-202ENST00000433878 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
FYCO1-202ENST00000433878 DNMBPQ6XZF7 1577 aa13.04□□□□□ -0.32
FYCO1-202ENST00000433878 GAPVD1Q14C86 1478 aa13.01□□□□□ -0.33
FYCO1-202ENST00000433878 GRIN2BQ13224 1484 aa12.99□□□□□ -0.33
FYCO1-202ENST00000433878 CARMIL2Q6F5E8 1435 aa12.97□□□□□ -0.33
FYCO1-202ENST00000433878 P3H3Q8IVL6 736 aa12.96□□□□□ -0.33
FYCO1-202ENST00000433878 MYT1LQ9UL68 1186 aa12.96□□□□□ -0.33
FYCO1-202ENST00000433878 GOLGA3Q08378 1498 aa12.96□□□□□ -0.34
FYCO1-202ENST00000433878 POLA1P09884 1462 aaPredicted RBP12.96□□□□□ -0.34
FYCO1-202ENST00000433878 RAD54L2Q9Y4B4 1467 aa12.96□□□□□ -0.34
FYCO1-202ENST00000433878 LOC105371045A0A1W2PR82 267 aa12.95□□□□□ -0.34
FYCO1-202ENST00000433878 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.342e-8■■■■■ 52.3
FYCO1-202ENST00000433878 URB2Q14146 1524 aaKnown RBP12.92□□□□□ -0.34
FYCO1-202ENST00000433878 FHAD1B1AJZ9 1412 aa12.91□□□□□ -0.34
FYCO1-202ENST00000433878 CUX1P39880 1505 aa12.9□□□□□ -0.34
FYCO1-202ENST00000433878 RAPGEF2Q9Y4G8 1499 aa12.9□□□□□ -0.34
FYCO1-202ENST00000433878 TOP2BQ02880 1626 aa12.89□□□□□ -0.35
FYCO1-202ENST00000433878 JPH4Q96JJ6 628 aa12.87□□□□□ -0.35
FYCO1-202ENST00000433878 ABCA10Q8WWZ4 1543 aa12.86□□□□□ -0.35
FYCO1-202ENST00000433878 WDR62O43379 1518 aa12.86□□□□□ -0.35
FYCO1-202ENST00000433878 IGF1RP08069 1367 aa12.85□□□□□ -0.35
FYCO1-202ENST00000433878 MAGI1Q96QZ7 1491 aaPredicted RBP12.83□□□□□ -0.36
FYCO1-202ENST00000433878 PLEKHD1A6NEE1 506 aa12.82□□□□□ -0.36
FYCO1-202ENST00000433878 CLIP1P30622 1438 aa12.81□□□□□ -0.36
FYCO1-202ENST00000433878 TNIKQ9UKE5 1360 aa12.81□□□□□ -0.36
FYCO1-202ENST00000433878 SYNJ1O43426 1573 aa12.8□□□□□ -0.36
FYCO1-202ENST00000433878 SNAPC4Q5SXM2 1469 aa12.8□□□□□ -0.36
FYCO1-202ENST00000433878 ARID3CA6NKF2 412 aa12.79□□□□□ -0.36
FYCO1-202ENST00000433878 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
FYCO1-202ENST00000433878 SYNJ2O15056 1496 aa12.77□□□□□ -0.37
FYCO1-202ENST00000433878 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
FYCO1-202ENST00000433878 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms