RNA–Protein interactions for RNA: ENST00000432258.1

AC003958.2-202, humanhuman

TSL 2 BASIC

Gene AC003958.2, Length 3,890 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003958.2-202ENST00000432258 NISCHQ9Y2I1 1504 aa19.44■□□□□ 0.7
AC003958.2-202ENST00000432258 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
AC003958.2-202ENST00000432258 SHROOM4Q9ULL8 1493 aa16.78■□□□□ 0.28
AC003958.2-202ENST00000432258 CCDC180Q9P1Z9 1646 aa16.5■□□□□ 0.23
AC003958.2-202ENST00000432258 SUPT5HO00267 1087 aaKnown RBP16.36■□□□□ 0.21
AC003958.2-202ENST00000432258 ZCCHC6Q5VYS8 1495 aaKnown RBP16.33■□□□□ 0.2
AC003958.2-202ENST00000432258 ABCC9O60706 1549 aa16■□□□□ 0.15
AC003958.2-202ENST00000432258 PCGF6Q9BYE7 350 aa15.83■□□□□ 0.12
AC003958.2-202ENST00000432258 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.11
AC003958.2-202ENST00000432258 SCRIBQ14160 1630 aa15.72■□□□□ 0.11
AC003958.2-202ENST00000432258 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
AC003958.2-202ENST00000432258 HRCP23327 699 aa15.52■□□□□ 0.08
AC003958.2-202ENST00000432258 PPARGC1BQ86YN6 1023 aaKnown RBP15.49■□□□□ 0.07
AC003958.2-202ENST00000432258 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
AC003958.2-202ENST00000432258 NACADO15069 1562 aa15.45■□□□□ 0.06
AC003958.2-202ENST00000432258 MYO15BQ96JP2 1530 aa15.4■□□□□ 0.06
AC003958.2-202ENST00000432258 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
AC003958.2-202ENST00000432258 RB1CC1Q8TDY2 1594 aa15.33■□□□□ 0.04
AC003958.2-202ENST00000432258 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.04
AC003958.2-202ENST00000432258 FAM9AQ8IZU1 332 aaPredicted RBP15.32■□□□□ 0.04
AC003958.2-202ENST00000432258 CECR2Q9BXF3 1484 aa15.31■□□□□ 0.04
AC003958.2-202ENST00000432258 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
AC003958.2-202ENST00000432258 MROH2BQ7Z745 1585 aa15.16■□□□□ 0.02
AC003958.2-202ENST00000432258 TRIM41Q8WV44 630 aa15.13■□□□□ 0.01
AC003958.2-202ENST00000432258 TTBK1Q5TCY1 1321 aaPredicted RBP15.1■□□□□ 0.01
AC003958.2-202ENST00000432258 WIZO95785 1651 aa15.05■□□□□ -0
AC003958.2-202ENST00000432258 TRIM26Q12899 539 aaPredicted RBP15.04■□□□□ -0
AC003958.2-202ENST00000432258 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
AC003958.2-202ENST00000432258 UNC13AQ9UPW8 1703 aa14.95□□□□□ -0.02
AC003958.2-202ENST00000432258 ZEB1P37275 1124 aaPredicted RBP14.94□□□□□ -0.02
AC003958.2-202ENST00000432258 PELP1Q8IZL8 1130 aaKnown RBP14.89□□□□□ -0.03
AC003958.2-202ENST00000432258 CCER1Q8TC90 406 aaPredicted RBP14.89□□□□□ -0.03
AC003958.2-202ENST00000432258 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
AC003958.2-202ENST00000432258 SMARCA4P51532 1647 aa14.85□□□□□ -0.03
AC003958.2-202ENST00000432258 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.04
AC003958.2-202ENST00000432258 YTHDC1Q96MU7 727 aaKnown RBP14.76□□□□□ -0.05
AC003958.2-202ENST00000432258 TOP2AP11388 1531 aaKnown RBP14.74□□□□□ -0.05
AC003958.2-202ENST00000432258 CENPBP07199 599 aaPredicted RBP14.73□□□□□ -0.05
AC003958.2-202ENST00000432258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.71□□□□□ -0.05
AC003958.2-202ENST00000432258 ABCC8Q09428 1581 aa14.69□□□□□ -0.06
AC003958.2-202ENST00000432258 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
AC003958.2-202ENST00000432258 BAZ1BQ9UIG0 1483 aaKnown RBP14.64□□□□□ -0.07
AC003958.2-202ENST00000432258 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
AC003958.2-202ENST00000432258 RANGAP1P46060 587 aaPredicted RBP14.59□□□□□ -0.07
AC003958.2-202ENST00000432258 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
AC003958.2-202ENST00000432258 UBTFP17480 764 aaKnown RBP14.55□□□□□ -0.08
AC003958.2-202ENST00000432258 GTF3C3Q9Y5Q9 886 aa14.52□□□□□ -0.08
AC003958.2-202ENST00000432258 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.09
AC003958.2-202ENST00000432258 SOGA1O94964 1423 aa14.52□□□□□ -0.09
AC003958.2-202ENST00000432258 EIF4G1Q04637 1599 aaKnown RBP14.48□□□□□ -0.09
AC003958.2-202ENST00000432258 WRNQ14191 1432 aaPredicted RBP eCLIP14.47□□□□□ -0.09
AC003958.2-202ENST00000432258 APLP2Q06481 763 aa14.45□□□□□ -0.1
AC003958.2-202ENST00000432258 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
AC003958.2-202ENST00000432258 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
AC003958.2-202ENST00000432258 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
AC003958.2-202ENST00000432258 ACIN1Q9UKV3 1341 aaKnown RBP14.42□□□□□ -0.1
AC003958.2-202ENST00000432258 NEUROD1Q13562 356 aa14.4□□□□□ -0.1
AC003958.2-202ENST00000432258 HNRNPUL2Q1KMD3 747 aaKnown RBP14.39□□□□□ -0.11
AC003958.2-202ENST00000432258 NCAPD3P42695 1498 aa14.34□□□□□ -0.11
AC003958.2-202ENST00000432258 SYNJ1O43426 1573 aa14.32□□□□□ -0.12
AC003958.2-202ENST00000432258 MYT1Q01538 1121 aa14.29□□□□□ -0.12
AC003958.2-202ENST00000432258 CEP162Q5TB80 1403 aa14.27□□□□□ -0.13
AC003958.2-202ENST00000432258 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
AC003958.2-202ENST00000432258 CC2D2AQ9P2K1 1620 aa14.22□□□□□ -0.13
AC003958.2-202ENST00000432258 EEA1Q15075 1411 aa14.22□□□□□ -0.13
AC003958.2-202ENST00000432258 DNAJC5BQ9UF47 199 aa14.2□□□□□ -0.14
AC003958.2-202ENST00000432258 TNIKQ9UKE5 1360 aa14.2□□□□□ -0.14
AC003958.2-202ENST00000432258 GOLGA3Q08378 1498 aa14.2□□□□□ -0.14
AC003958.2-202ENST00000432258 ZNF316A6NFI3 1004 aaPredicted RBP14.16□□□□□ -0.14
AC003958.2-202ENST00000432258 CADPSQ9ULU8 1353 aa14.15□□□□□ -0.14
AC003958.2-202ENST00000432258 CFTRP13569 1480 aa14.15□□□□□ -0.14
AC003958.2-202ENST00000432258 RAPGEF2Q9Y4G8 1499 aa14.14□□□□□ -0.15
AC003958.2-202ENST00000432258 CEP164Q9UPV0 1460 aa14.14□□□□□ -0.15
AC003958.2-202ENST00000432258 ITGAEP38570 1179 aa14.14□□□□□ -0.15
AC003958.2-202ENST00000432258 CUX1P39880 1505 aa14.12□□□□□ -0.15
AC003958.2-202ENST00000432258 CLIP1P30622 1438 aa14.1□□□□□ -0.15
AC003958.2-202ENST00000432258 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
AC003958.2-202ENST00000432258 NESP48681 1621 aa14.1□□□□□ -0.15
AC003958.2-202ENST00000432258 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
AC003958.2-202ENST00000432258 CUX2O14529 1486 aa14.05□□□□□ -0.16
AC003958.2-202ENST00000432258 BCANQ96GW7 911 aa14.03□□□□□ -0.16
AC003958.2-202ENST00000432258 ATP1B4Q9UN42 357 aaPredicted RBP14.03□□□□□ -0.16
AC003958.2-202ENST00000432258 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
AC003958.2-202ENST00000432258 MIER1Q8N108 512 aa14.03□□□□□ -0.16
AC003958.2-202ENST00000432258 P3H3Q8IVL6 736 aa14.02□□□□□ -0.17
AC003958.2-202ENST00000432258 FGD5Q6ZNL6 1462 aa13.98□□□□□ -0.17
AC003958.2-202ENST00000432258 BIVM-ERCC5R4GMW8 1640 aa13.98□□□□□ -0.17
AC003958.2-202ENST00000432258 KIF21BO75037 1637 aa13.97□□□□□ -0.17
AC003958.2-202ENST00000432258 NEFLP07196 543 aa13.96□□□□□ -0.17
AC003958.2-202ENST00000432258 RAD54L2Q9Y4B4 1467 aa13.96□□□□□ -0.18
AC003958.2-202ENST00000432258 ERICH6Q7L0X2 663 aa13.92□□□□□ -0.18
AC003958.2-202ENST00000432258 IGF1RP08069 1367 aa13.92□□□□□ -0.18
AC003958.2-202ENST00000432258 PRXQ9BXM0 1461 aa13.92□□□□□ -0.18
AC003958.2-202ENST00000432258 CARMIL1Q5VZK9 1371 aa13.92□□□□□ -0.18
AC003958.2-202ENST00000432258 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
AC003958.2-202ENST00000432258 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
AC003958.2-202ENST00000432258 KANK4Q5T7N3 995 aaPredicted RBP13.87□□□□□ -0.19
AC003958.2-202ENST00000432258 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
AC003958.2-202ENST00000432258 POLA1P09884 1462 aaPredicted RBP13.84□□□□□ -0.19
AC003958.2-202ENST00000432258 PDS5BQ9NTI5 1447 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms