RNA–Protein interactions for RNA: ENST00000431196.2

KDM6A-204, Transcript of lysine demethylase 6A, humanhuman

TSL 3

Gene KDM6A, Length 735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6A-204ENST00000431196 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
KDM6A-204ENST00000431196 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
KDM6A-204ENST00000431196 SENP3Q9H4L4 574 aaPredicted RBP15.38■□□□□ 0.05
KDM6A-204ENST00000431196 PHF23Q9BUL5 403 aaPredicted RBP15.09■□□□□ 0.01
KDM6A-204ENST00000431196 FOXD1Q16676 465 aa14.32□□□□□ -0.12
KDM6A-204ENST00000431196 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
KDM6A-204ENST00000431196 MSH5O43196 834 aa13.58□□□□□ -0.24
KDM6A-204ENST00000431196 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
KDM6A-204ENST00000431196 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
KDM6A-204ENST00000431196 PPP6R1Q9UPN7 881 aa13.13□□□□□ -0.31
KDM6A-204ENST00000431196 ADRA2BP18089 450 aa13.06□□□□□ -0.32
KDM6A-204ENST00000431196 DMRT2Q9Y5R5 561 aa12.14□□□□□ -0.47
KDM6A-204ENST00000431196 MAPK8IP2Q13387 824 aaPredicted RBP12.07□□□□□ -0.48
KDM6A-204ENST00000431196 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
KDM6A-204ENST00000431196 CACNB1Q02641 598 aaPredicted RBP11.79□□□□□ -0.52
KDM6A-204ENST00000431196 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
KDM6A-204ENST00000431196 HOXD11P31277 338 aaPredicted RBP11.58□□□□□ -0.56
KDM6A-204ENST00000431196 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
KDM6A-204ENST00000431196 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
KDM6A-204ENST00000431196 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
KDM6A-204ENST00000431196 RNF216Q9NWF9 866 aaPredicted RBP11.42□□□□□ -0.58
KDM6A-204ENST00000431196 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
KDM6A-204ENST00000431196 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
KDM6A-204ENST00000431196 NCBP3Q53F19 620 aaKnown RBP11.07□□□□□ -0.64
KDM6A-204ENST00000431196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
KDM6A-204ENST00000431196 NPM3O75607 178 aaKnown RBP10.87□□□□□ -0.67
KDM6A-204ENST00000431196 U3KPZ7 1027 aaPredicted RBP10.75□□□□□ -0.69
KDM6A-204ENST00000431196 POTEHQ6S545 545 aa10.69□□□□□ -0.7
KDM6A-204ENST00000431196 DSG3P32926 999 aa10.68□□□□□ -0.7
KDM6A-204ENST00000431196 CAPN15O75808 1086 aa10.67□□□□□ -0.7
KDM6A-204ENST00000431196 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
KDM6A-204ENST00000431196 APLP2Q06481 763 aa10.5□□□□□ -0.73
KDM6A-204ENST00000431196 KCNA4P22459 653 aa10.47□□□□□ -0.73
KDM6A-204ENST00000431196 ZNF219Q9P2Y4 722 aaPredicted RBP10.45□□□□□ -0.74
KDM6A-204ENST00000431196 SLC4A2P04920 1241 aa10.44□□□□□ -0.74
KDM6A-204ENST00000431196 TRHP20396 242 aaPredicted RBP10.41□□□□□ -0.74
KDM6A-204ENST00000431196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.4□□□□□ -0.74
KDM6A-204ENST00000431196 HNRNPUL2Q1KMD3 747 aaKnown RBP10.4□□□□□ -0.74
KDM6A-204ENST00000431196 ABCB7O75027 752 aa10.37□□□□□ -0.75
KDM6A-204ENST00000431196 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
KDM6A-204ENST00000431196 RBM42Q9BTD8 480 aaKnown RBP10.26□□□□□ -0.77
KDM6A-204ENST00000431196 CHRDL2Q6WN34 429 aa10.11□□□□□ -0.79
KDM6A-204ENST00000431196 MYCNP04198 464 aaPredicted RBP10.09□□□□□ -0.79
KDM6A-204ENST00000431196 POLA2Q14181 598 aa10.07□□□□□ -0.8
KDM6A-204ENST00000431196 AKT1S1Q96B36 256 aa9.93□□□□□ -0.82
KDM6A-204ENST00000431196 ZBTB12Q9Y330 459 aaPredicted RBP9.93□□□□□ -0.82
KDM6A-204ENST00000431196 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
KDM6A-204ENST00000431196 ATF5Q9Y2D1 282 aaPredicted RBP9.83□□□□□ -0.84
KDM6A-204ENST00000431196 FOXD4L1Q9NU39 408 aa9.82□□□□□ -0.84
KDM6A-204ENST00000431196 REM2Q8IYK8 340 aaPredicted RBP9.81□□□□□ -0.84
KDM6A-204ENST00000431196 PIP4P2Q8N4L2 257 aa9.79□□□□□ -0.84
KDM6A-204ENST00000431196 SLC4A1APQ9BWU0 796 aaKnown RBP9.79□□□□□ -0.84
KDM6A-204ENST00000431196 OSCARQ8IYS5 282 aa9.78□□□□□ -0.84
KDM6A-204ENST00000431196 PITPNM1O00562 1244 aa9.71□□□□□ -0.86
KDM6A-204ENST00000431196 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
KDM6A-204ENST00000431196 HAX1O00165 279 aa9.69□□□□□ -0.86
KDM6A-204ENST00000431196 ZBTB22O15209 634 aa9.67□□□□□ -0.86
KDM6A-204ENST00000431196 ATXN8OSP0DMR3 200 aa9.58□□□□□ -0.88
KDM6A-204ENST00000431196 SPDYE2BA6NHP3 402 aa9.57□□□□□ -0.88
KDM6A-204ENST00000431196 SPDYE6P0CI01 402 aa9.57□□□□□ -0.88
KDM6A-204ENST00000431196 SPDYE2Q495Y8 402 aa9.57□□□□□ -0.88
KDM6A-204ENST00000431196 FBLN2P98095 1184 aa9.52□□□□□ -0.89
KDM6A-204ENST00000431196 EVX2Q03828 476 aa9.5□□□□□ -0.89
KDM6A-204ENST00000431196 SPDYE1Q8NFV5 336 aaPredicted RBP9.47□□□□□ -0.89
KDM6A-204ENST00000431196 PRKAR2AP13861 404 aaKnown RBP9.45□□□□□ -0.9
KDM6A-204ENST00000431196 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
KDM6A-204ENST00000431196 C19orf67A6NJJ6 358 aa9.4□□□□□ -0.9
KDM6A-204ENST00000431196 SSUH2Q9Y2M2 353 aa9.4□□□□□ -0.9
KDM6A-204ENST00000431196 ZNF692Q9BU19 519 aaPredicted RBP9.37□□□□□ -0.91
KDM6A-204ENST00000431196 MKRN4PQ13434 485 aaPredicted RBP9.36□□□□□ -0.91
KDM6A-204ENST00000431196 GABBR2O75899 941 aa9.32□□□□□ -0.92
KDM6A-204ENST00000431196 LHX8Q68G74 356 aa9.26□□□□□ -0.93
KDM6A-204ENST00000431196 CHADLQ6NUI6 762 aa9.25□□□□□ -0.93
KDM6A-204ENST00000431196 PRR29P0C7W0 189 aa9.24□□□□□ -0.93
KDM6A-204ENST00000431196 PABPN1Q86U42 306 aaKnown RBP eCLIP9.22□□□□□ -0.93
KDM6A-204ENST00000431196 CLCN6P51797 869 aa9.16□□□□□ -0.94
KDM6A-204ENST00000431196 CD44P16070 742 aaKnown RBP9.15□□□□□ -0.94
KDM6A-204ENST00000431196 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
KDM6A-204ENST00000431196 POTEIP0CG38 1075 aa9.1□□□□□ -0.95
KDM6A-204ENST00000431196 CSRNP3Q8WYN3 585 aa9.07□□□□□ -0.96
KDM6A-204ENST00000431196 DCBLD2Q96PD2 775 aa9.02□□□□□ -0.97
KDM6A-204ENST00000431196 ZNF579Q8NAF0 562 aaKnown RBP9.01□□□□□ -0.97
KDM6A-204ENST00000431196 ZRANB1Q9UGI0 708 aa8.96□□□□□ -0.98
KDM6A-204ENST00000431196 STAG3Q9UJ98 1225 aa8.95□□□□□ -0.98
KDM6A-204ENST00000431196 CREBZFQ9NS37 354 aa8.93□□□□□ -0.98
KDM6A-204ENST00000431196 PLSCR2Q9NRY7 297 aa8.89□□□□□ -0.99
KDM6A-204ENST00000431196 GALR2O43603 387 aaPredicted RBP8.88□□□□□ -0.99
KDM6A-204ENST00000431196 PAK3O75914 559 aaPredicted RBP8.87□□□□□ -0.99
KDM6A-204ENST00000431196 OTUD5Q96G74 571 aa8.83□□□□□ -1
KDM6A-204ENST00000431196 NPM1P06748 294 aaKnown RBP eCLIP8.8□□□□□ -1
KDM6A-204ENST00000431196 SPDYE4A6NLX3 237 aa8.79□□□□□ -1
KDM6A-204ENST00000431196 EHMT2Q96KQ7 1210 aa8.79□□□□□ -1
KDM6A-204ENST00000431196 PHF12Q96QT6 1004 aa8.79□□□□□ -1
KDM6A-204ENST00000431196 POTEB2H3BUK9 544 aa8.78□□□□□ -1
KDM6A-204ENST00000431196 MNX1P50219 401 aaPredicted RBP8.74□□□□□ -1.01
KDM6A-204ENST00000431196 POTEMA6NI47 508 aa8.73□□□□□ -1.01
KDM6A-204ENST00000431196 ASTLQ6HA08 431 aaPredicted RBP8.72□□□□□ -1.01
KDM6A-204ENST00000431196 PELP1Q8IZL8 1130 aaKnown RBP8.72□□□□□ -1.01
KDM6A-204ENST00000431196 POTEGQ6S5H5 508 aa8.7□□□□□ -1.02
KDM6A-204ENST00000431196 METRNQ9UJH8 293 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms