RNA–Protein interactions for RNA: ENST00000429781.1

LINC00476-204, long intergenic non-protein coding RNA 476, humanhuman

TSL 2 BASIC

Gene LINC00476, Length 2,825 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-204ENST00000429781 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.68
LINC00476-204ENST00000429781 CCDC180Q9P1Z9 1646 aa27.2■■□□□ 1.94
LINC00476-204ENST00000429781 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
LINC00476-204ENST00000429781 ZCCHC6Q5VYS8 1495 aaKnown RBP26.9■■□□□ 1.9
LINC00476-204ENST00000429781 DCAF8L2P0C7V8 631 aa26.32■■□□□ 1.8
LINC00476-204ENST00000429781 SUPT5HO00267 1087 aaKnown RBP26.29■■□□□ 1.8
LINC00476-204ENST00000429781 DCAF1Q9Y4B6 1507 aa26.13■■□□□ 1.77
LINC00476-204ENST00000429781 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
LINC00476-204ENST00000429781 MYO15BQ96JP2 1530 aa25.44■■□□□ 1.66
LINC00476-204ENST00000429781 SCRIBQ14160 1630 aa25.43■■□□□ 1.66
LINC00476-204ENST00000429781 ABCC9O60706 1549 aa25.37■■□□□ 1.65
LINC00476-204ENST00000429781 NACADO15069 1562 aa25.15■■□□□ 1.62
LINC00476-204ENST00000429781 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
LINC00476-204ENST00000429781 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
LINC00476-204ENST00000429781 CECR2Q9BXF3 1484 aa24.82■■□□□ 1.56
LINC00476-204ENST00000429781 MROH2BQ7Z745 1585 aa24.73■■□□□ 1.55
LINC00476-204ENST00000429781 LOC105371045A0A1W2PR82 267 aa24.69■■□□□ 1.54
LINC00476-204ENST00000429781 WIZO95785 1651 aa24.6■■□□□ 1.53
LINC00476-204ENST00000429781 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
LINC00476-204ENST00000429781 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
LINC00476-204ENST00000429781 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
LINC00476-204ENST00000429781 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.5
LINC00476-204ENST00000429781 HRCP23327 699 aa24.34■■□□□ 1.49
LINC00476-204ENST00000429781 SMARCA4P51532 1647 aa24.3■■□□□ 1.48
LINC00476-204ENST00000429781 FAM9AQ8IZU1 332 aaPredicted RBP24.29■■□□□ 1.48
LINC00476-204ENST00000429781 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
LINC00476-204ENST00000429781 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
LINC00476-204ENST00000429781 BICRAQ9NZM4 1560 aa24.13■■□□□ 1.45
LINC00476-204ENST00000429781 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.45
LINC00476-204ENST00000429781 EHMT2Q96KQ7 1210 aa24.08■■□□□ 1.45
LINC00476-204ENST00000429781 SMARCA2P51531 1590 aa24.08■■□□□ 1.44
LINC00476-204ENST00000429781 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.44
LINC00476-204ENST00000429781 TRIM26Q12899 539 aaPredicted RBP24.06■■□□□ 1.44
LINC00476-204ENST00000429781 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
LINC00476-204ENST00000429781 PPARGC1BQ86YN6 1023 aaKnown RBP23.88■■□□□ 1.41
LINC00476-204ENST00000429781 PEG3Q9GZU2 1588 aa23.85■■□□□ 1.41
LINC00476-204ENST00000429781 ATAD2BQ9ULI0 1458 aa23.69■■□□□ 1.38
LINC00476-204ENST00000429781 SOGA1O94964 1423 aa23.68■■□□□ 1.38
LINC00476-204ENST00000429781 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
LINC00476-204ENST00000429781 RUSC2Q8N2Y8 1516 aa23.58■■□□□ 1.36
LINC00476-204ENST00000429781 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.36
LINC00476-204ENST00000429781 EEA1Q15075 1411 aa23.53■■□□□ 1.36
LINC00476-204ENST00000429781 SYNJ1O43426 1573 aa23.5■■□□□ 1.35
LINC00476-204ENST00000429781 CEP162Q5TB80 1403 aa23.49■■□□□ 1.35
LINC00476-204ENST00000429781 CSRNP3Q8WYN3 585 aa23.48■■□□□ 1.35
LINC00476-204ENST00000429781 TNIKQ9UKE5 1360 aa23.44■■□□□ 1.34
LINC00476-204ENST00000429781 PELP1Q8IZL8 1130 aaKnown RBP23.43■■□□□ 1.34
LINC00476-204ENST00000429781 ZEB1P37275 1124 aaPredicted RBP23.41■■□□□ 1.34
LINC00476-204ENST00000429781 GOLGA3Q08378 1498 aa23.38■■□□□ 1.33
LINC00476-204ENST00000429781 UBTFP17480 764 aaKnown RBP23.37■■□□□ 1.33
LINC00476-204ENST00000429781 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
LINC00476-204ENST00000429781 CEP164Q9UPV0 1460 aa23.27■■□□□ 1.32
LINC00476-204ENST00000429781 TTBK1Q5TCY1 1321 aaPredicted RBP23.27■■□□□ 1.31
LINC00476-204ENST00000429781 KIF21BO75037 1637 aa23.26■■□□□ 1.31
LINC00476-204ENST00000429781 NCAPD3P42695 1498 aa23.26■■□□□ 1.31
LINC00476-204ENST00000429781 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
LINC00476-204ENST00000429781 BIVM-ERCC5R4GMW8 1640 aa23.16■■□□□ 1.3
LINC00476-204ENST00000429781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.15■■□□□ 1.3
LINC00476-204ENST00000429781 RAPGEF2Q9Y4G8 1499 aa23.13■■□□□ 1.29
LINC00476-204ENST00000429781 CLIP1P30622 1438 aa23.09■■□□□ 1.29
LINC00476-204ENST00000429781 CCER1Q8TC90 406 aaPredicted RBP23.06■■□□□ 1.28
LINC00476-204ENST00000429781 CUX1P39880 1505 aa23.04■■□□□ 1.28
LINC00476-204ENST00000429781 CFTRP13569 1480 aa23.03■■□□□ 1.28
LINC00476-204ENST00000429781 VPS8Q8N3P4 1428 aa22.97■■□□□ 1.27
LINC00476-204ENST00000429781 RANGAP1P46060 587 aaPredicted RBP22.95■■□□□ 1.26
LINC00476-204ENST00000429781 PRXQ9BXM0 1461 aa22.92■■□□□ 1.26
LINC00476-204ENST00000429781 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
LINC00476-204ENST00000429781 PRDM2Q13029 1718 aa22.89■■□□□ 1.26
LINC00476-204ENST00000429781 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
LINC00476-204ENST00000429781 CC2D2AQ9P2K1 1620 aa22.8■■□□□ 1.24
LINC00476-204ENST00000429781 APLP2Q06481 763 aa22.79■■□□□ 1.24
LINC00476-204ENST00000429781 CADPSQ9ULU8 1353 aa22.78■■□□□ 1.24
LINC00476-204ENST00000429781 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
LINC00476-204ENST00000429781 HNRNPUL2Q1KMD3 747 aaKnown RBP22.73■■□□□ 1.23
LINC00476-204ENST00000429781 CUX2O14529 1486 aa22.69■■□□□ 1.22
LINC00476-204ENST00000429781 SCAF1Q9H7N4 1312 aaKnown RBP22.67■■□□□ 1.22
LINC00476-204ENST00000429781 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
LINC00476-204ENST00000429781 MYT1Q01538 1121 aa22.63■■□□□ 1.21
LINC00476-204ENST00000429781 IGF1RP08069 1367 aa22.6■■□□□ 1.21
LINC00476-204ENST00000429781 ARHGAP35Q9NRY4 1499 aa22.6■■□□□ 1.21
LINC00476-204ENST00000429781 FANCD2Q9BXW9 1451 aa22.59■■□□□ 1.21
LINC00476-204ENST00000429781 KANK4Q5T7N3 995 aaPredicted RBP22.56■■□□□ 1.2
LINC00476-204ENST00000429781 CARMIL1Q5VZK9 1371 aa22.51■■□□□ 1.19
LINC00476-204ENST00000429781 NESP48681 1621 aa22.49■■□□□ 1.19
LINC00476-204ENST00000429781 DIEXFQ68CQ4 756 aaKnown RBP22.49■■□□□ 1.19
LINC00476-204ENST00000429781 DNMBPQ6XZF7 1577 aa22.47■■□□□ 1.19
LINC00476-204ENST00000429781 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
LINC00476-204ENST00000429781 TOPBP1Q92547 1522 aa22.43■■□□□ 1.18
LINC00476-204ENST00000429781 POLA1P09884 1462 aaPredicted RBP22.41■■□□□ 1.18
LINC00476-204ENST00000429781 RRBP1Q9P2E9 1410 aaKnown RBP22.4■■□□□ 1.18
LINC00476-204ENST00000429781 ABCA10Q8WWZ4 1543 aa22.38■■□□□ 1.17
LINC00476-204ENST00000429781 ZNF316A6NFI3 1004 aaPredicted RBP22.38■■□□□ 1.17
LINC00476-204ENST00000429781 TIAM1Q13009 1591 aa22.33■■□□□ 1.17
LINC00476-204ENST00000429781 LAMC3Q9Y6N6 1575 aa22.32■■□□□ 1.16
LINC00476-204ENST00000429781 CCNB3Q8WWL7 1395 aa22.31■■□□□ 1.16
LINC00476-204ENST00000429781 DHX57Q6P158 1386 aaKnown RBP22.3■■□□□ 1.16
LINC00476-204ENST00000429781 URB2Q14146 1524 aaKnown RBP22.29■■□□□ 1.16
LINC00476-204ENST00000429781 MAP3K1Q13233 1512 aa22.27■■□□□ 1.16
LINC00476-204ENST00000429781 CUL7Q14999 1698 aa22.26■■□□□ 1.15
LINC00476-204ENST00000429781 PCF11O94913 1555 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms