RNA–Protein interactions for RNA: ENST00000429539.1

AL138775.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL138775.1, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL138775.1-201ENST00000429539 AEBP2Q6ZN18 517 aaPredicted RBP26.36■■□□□ 1.81
AL138775.1-201ENST00000429539 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
AL138775.1-201ENST00000429539 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
AL138775.1-201ENST00000429539 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
AL138775.1-201ENST00000429539 FOXD1Q16676 465 aa20.9■□□□□ 0.94
AL138775.1-201ENST00000429539 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
AL138775.1-201ENST00000429539 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
AL138775.1-201ENST00000429539 ADRA2BP18089 450 aa19.7■□□□□ 0.74
AL138775.1-201ENST00000429539 PIAS4Q8N2W9 510 aaPredicted RBP19.62■□□□□ 0.73
AL138775.1-201ENST00000429539 MSH5O43196 834 aa19.51■□□□□ 0.71
AL138775.1-201ENST00000429539 POTEDQ86YR6 584 aa18.53■□□□□ 0.56
AL138775.1-201ENST00000429539 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
AL138775.1-201ENST00000429539 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
AL138775.1-201ENST00000429539 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
AL138775.1-201ENST00000429539 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
AL138775.1-201ENST00000429539 CNKSR2Q8WXI2 1034 aa17.52■□□□□ 0.4
AL138775.1-201ENST00000429539 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
AL138775.1-201ENST00000429539 HOXD11P31277 338 aaPredicted RBP17.33■□□□□ 0.36
AL138775.1-201ENST00000429539 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
AL138775.1-201ENST00000429539 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
AL138775.1-201ENST00000429539 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
AL138775.1-201ENST00000429539 KCNA4P22459 653 aa16.93■□□□□ 0.3
AL138775.1-201ENST00000429539 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
AL138775.1-201ENST00000429539 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
AL138775.1-201ENST00000429539 CACNB1Q02641 598 aaPredicted RBP16.56■□□□□ 0.24
AL138775.1-201ENST00000429539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.24
AL138775.1-201ENST00000429539 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
AL138775.1-201ENST00000429539 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
AL138775.1-201ENST00000429539 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
AL138775.1-201ENST00000429539 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
AL138775.1-201ENST00000429539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
AL138775.1-201ENST00000429539 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
AL138775.1-201ENST00000429539 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
AL138775.1-201ENST00000429539 CAPN15O75808 1086 aa15.84■□□□□ 0.13
AL138775.1-201ENST00000429539 APLP2Q06481 763 aa15.84■□□□□ 0.13
AL138775.1-201ENST00000429539 SAMD1Q6SPF0 538 aaPredicted RBP15.78■□□□□ 0.12
AL138775.1-201ENST00000429539 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
AL138775.1-201ENST00000429539 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
AL138775.1-201ENST00000429539 DSG3P32926 999 aa15.68■□□□□ 0.1
AL138775.1-201ENST00000429539 ZNF219Q9P2Y4 722 aaPredicted RBP15.66■□□□□ 0.1
AL138775.1-201ENST00000429539 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
AL138775.1-201ENST00000429539 ZBTB22O15209 634 aa15.54■□□□□ 0.08
AL138775.1-201ENST00000429539 ABCB7O75027 752 aa15.47■□□□□ 0.07
AL138775.1-201ENST00000429539 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
AL138775.1-201ENST00000429539 POLA2Q14181 598 aa15.3■□□□□ 0.04
AL138775.1-201ENST00000429539 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
AL138775.1-201ENST00000429539 CSRNP3Q8WYN3 585 aa15.11■□□□□ 0.01
AL138775.1-201ENST00000429539 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
AL138775.1-201ENST00000429539 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
AL138775.1-201ENST00000429539 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
AL138775.1-201ENST00000429539 FBLN2P98095 1184 aa14.79□□□□□ -0.04
AL138775.1-201ENST00000429539 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
AL138775.1-201ENST00000429539 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
AL138775.1-201ENST00000429539 MKRN4PQ13434 485 aaPredicted RBP14.65□□□□□ -0.06
AL138775.1-201ENST00000429539 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
AL138775.1-201ENST00000429539 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
AL138775.1-201ENST00000429539 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
AL138775.1-201ENST00000429539 POTEHQ6S545 545 aa14.59□□□□□ -0.07
AL138775.1-201ENST00000429539 REM2Q8IYK8 340 aaPredicted RBP14.53□□□□□ -0.08
AL138775.1-201ENST00000429539 CHRDL2Q6WN34 429 aa14.52□□□□□ -0.09
AL138775.1-201ENST00000429539 ZNF692Q9BU19 519 aaPredicted RBP14.45□□□□□ -0.1
AL138775.1-201ENST00000429539 SSUH2Q9Y2M2 353 aa14.4□□□□□ -0.1
AL138775.1-201ENST00000429539 PITPNM1O00562 1244 aa14.36□□□□□ -0.11
AL138775.1-201ENST00000429539 SPDYE1Q8NFV5 336 aaPredicted RBP14.27□□□□□ -0.13
AL138775.1-201ENST00000429539 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
AL138775.1-201ENST00000429539 PIP4P2Q8N4L2 257 aa14.22□□□□□ -0.13
AL138775.1-201ENST00000429539 CLEC11AQ9Y240 323 aa14.21□□□□□ -0.13
AL138775.1-201ENST00000429539 FXR2P51116 673 aaKnown RBP eCLIP14.2□□□□□ -0.14
AL138775.1-201ENST00000429539 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
AL138775.1-201ENST00000429539 PRR29P0C7W0 189 aa14.04□□□□□ -0.16
AL138775.1-201ENST00000429539 PRKAR2AP13861 404 aaKnown RBP14.01□□□□□ -0.17
AL138775.1-201ENST00000429539 STAG3Q9UJ98 1225 aa13.95□□□□□ -0.18
AL138775.1-201ENST00000429539 HAX1O00165 279 aa13.91□□□□□ -0.18
AL138775.1-201ENST00000429539 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
AL138775.1-201ENST00000429539 PROM2Q8N271 834 aa13.82□□□□□ -0.2
AL138775.1-201ENST00000429539 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
AL138775.1-201ENST00000429539 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
AL138775.1-201ENST00000429539 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
AL138775.1-201ENST00000429539 CREBZFQ9NS37 354 aa13.72□□□□□ -0.21
AL138775.1-201ENST00000429539 EVX2Q03828 476 aa13.71□□□□□ -0.21
AL138775.1-201ENST00000429539 FKBP8Q14318 412 aa13.7□□□□□ -0.22
AL138775.1-201ENST00000429539 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
AL138775.1-201ENST00000429539 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
AL138775.1-201ENST00000429539 MNX1P50219 401 aaPredicted RBP13.51□□□□□ -0.25
AL138775.1-201ENST00000429539 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
AL138775.1-201ENST00000429539 MIER1Q8N108 512 aa13.47□□□□□ -0.25
AL138775.1-201ENST00000429539 GABBR2O75899 941 aa13.46□□□□□ -0.25
AL138775.1-201ENST00000429539 ZRANB1Q9UGI0 708 aa13.44□□□□□ -0.26
AL138775.1-201ENST00000429539 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
AL138775.1-201ENST00000429539 CLCN6P51797 869 aa13.41□□□□□ -0.26
AL138775.1-201ENST00000429539 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
AL138775.1-201ENST00000429539 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
AL138775.1-201ENST00000429539 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
AL138775.1-201ENST00000429539 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
AL138775.1-201ENST00000429539 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
AL138775.1-201ENST00000429539 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
AL138775.1-201ENST00000429539 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
AL138775.1-201ENST00000429539 GALR2O43603 387 aaPredicted RBP13.18□□□□□ -0.3
AL138775.1-201ENST00000429539 DCBLD2Q96PD2 775 aa13.18□□□□□ -0.3
AL138775.1-201ENST00000429539 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms