RNA–Protein interactions for RNA: ENST00000429001.7

LARP4-204, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 5 BASIC

Gene LARP4, Length 4,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-204ENST00000429001 NISCHQ9Y2I1 1504 aa20.9■□□□□ 0.94
LARP4-204ENST00000429001 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
LARP4-204ENST00000429001 SHROOM4Q9ULL8 1493 aa19.25■□□□□ 0.67
LARP4-204ENST00000429001 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
LARP4-204ENST00000429001 EHMT2Q96KQ7 1210 aa18.19■□□□□ 0.5
LARP4-204ENST00000429001 ABCC9O60706 1549 aa17.97■□□□□ 0.47
LARP4-204ENST00000429001 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
LARP4-204ENST00000429001 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
LARP4-204ENST00000429001 ZCCHC6Q5VYS8 1495 aaKnown RBP17.38■□□□□ 0.37
LARP4-204ENST00000429001 TTBK1Q5TCY1 1321 aaPredicted RBP17.37■□□□□ 0.37
LARP4-204ENST00000429001 LOC105371045A0A1W2PR82 267 aa17.32■□□□□ 0.36
LARP4-204ENST00000429001 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
LARP4-204ENST00000429001 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
LARP4-204ENST00000429001 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
LARP4-204ENST00000429001 SCRIBQ14160 1630 aa17.22■□□□□ 0.35
LARP4-204ENST00000429001 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
LARP4-204ENST00000429001 PPARGC1BQ86YN6 1023 aaKnown RBP17.2■□□□□ 0.34
LARP4-204ENST00000429001 PCGF6Q9BYE7 350 aa17.1■□□□□ 0.33
LARP4-204ENST00000429001 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
LARP4-204ENST00000429001 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
LARP4-204ENST00000429001 RSF1Q96T23 1441 aaPredicted RBP16.67■□□□□ 0.26
LARP4-204ENST00000429001 ATP1B4Q9UN42 357 aaPredicted RBP16.65■□□□□ 0.26
LARP4-204ENST00000429001 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
LARP4-204ENST00000429001 RB1CC1Q8TDY2 1594 aa16.53■□□□□ 0.24
LARP4-204ENST00000429001 NACADO15069 1562 aa16.49■□□□□ 0.23
LARP4-204ENST00000429001 APLP2Q06481 763 aa16.47■□□□□ 0.23
LARP4-204ENST00000429001 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
LARP4-204ENST00000429001 DCAF1Q9Y4B6 1507 aa16.44■□□□□ 0.22
LARP4-204ENST00000429001 ITGAEP38570 1179 aa16.36■□□□□ 0.21
LARP4-204ENST00000429001 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
LARP4-204ENST00000429001 P3H3Q8IVL6 736 aa16.29■□□□□ 0.2
LARP4-204ENST00000429001 CCER1Q8TC90 406 aaPredicted RBP16.28■□□□□ 0.2
LARP4-204ENST00000429001 WIZO95785 1651 aa16.27■□□□□ 0.2
LARP4-204ENST00000429001 TRIM26Q12899 539 aaPredicted RBP16.25■□□□□ 0.19
LARP4-204ENST00000429001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
LARP4-204ENST00000429001 ARID3CA6NKF2 412 aa16.23■□□□□ 0.19
LARP4-204ENST00000429001 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
LARP4-204ENST00000429001 FBLN2P98095 1184 aa16.14■□□□□ 0.17
LARP4-204ENST00000429001 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
LARP4-204ENST00000429001 BAZ1AQ9NRL2 1556 aaPredicted RBP16.1■□□□□ 0.17
LARP4-204ENST00000429001 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
LARP4-204ENST00000429001 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
LARP4-204ENST00000429001 HRCP23327 699 aa16.08■□□□□ 0.17
LARP4-204ENST00000429001 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
LARP4-204ENST00000429001 SOGA1O94964 1423 aa16.05■□□□□ 0.16
LARP4-204ENST00000429001 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
LARP4-204ENST00000429001 RUSC2Q8N2Y8 1516 aa15.92■□□□□ 0.14
LARP4-204ENST00000429001 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
LARP4-204ENST00000429001 FAM50AQ14320 339 aaKnown RBP15.88■□□□□ 0.13
LARP4-204ENST00000429001 ATAD2BQ9ULI0 1458 aa15.87■□□□□ 0.13
LARP4-204ENST00000429001 YTHDC1Q96MU7 727 aaKnown RBP15.77■□□□□ 0.12
LARP4-204ENST00000429001 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.11
LARP4-204ENST00000429001 TOP2AP11388 1531 aaKnown RBP15.76■□□□□ 0.11
LARP4-204ENST00000429001 CEP162Q5TB80 1403 aa15.73■□□□□ 0.11
LARP4-204ENST00000429001 CNGB1Q14028 1251 aaPredicted RBP15.72■□□□□ 0.11
LARP4-204ENST00000429001 SMARCA2P51531 1590 aa15.69■□□□□ 0.1
LARP4-204ENST00000429001 NEUROD1Q13562 356 aa15.68■□□□□ 0.1
LARP4-204ENST00000429001 TDRD9Q8NDG6 1382 aaKnown RBP15.68■□□□□ 0.1
LARP4-204ENST00000429001 CLIP1P30622 1438 aa15.67■□□□□ 0.1
LARP4-204ENST00000429001 UNC13AQ9UPW8 1703 aa15.67■□□□□ 0.1
LARP4-204ENST00000429001 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
LARP4-204ENST00000429001 EIF4G1Q04637 1599 aaKnown RBP15.63■□□□□ 0.09
LARP4-204ENST00000429001 CUX2O14529 1486 aa15.61■□□□□ 0.09
LARP4-204ENST00000429001 NESP48681 1621 aa15.61■□□□□ 0.09
LARP4-204ENST00000429001 MYT1LQ9UL68 1186 aa15.6■□□□□ 0.09
LARP4-204ENST00000429001 ZNF777Q9ULD5 760 aaPredicted RBP15.6■□□□□ 0.09
LARP4-204ENST00000429001 CHIC2Q9UKJ5 165 aa15.59■□□□□ 0.09
LARP4-204ENST00000429001 KANK4Q5T7N3 995 aaPredicted RBP15.58■□□□□ 0.08
LARP4-204ENST00000429001 CADPSQ9ULU8 1353 aa15.56■□□□□ 0.08
LARP4-204ENST00000429001 GOLGA3Q08378 1498 aa15.55■□□□□ 0.08
LARP4-204ENST00000429001 CHMP7Q8WUX9 453 aaPredicted RBP15.55■□□□□ 0.08
LARP4-204ENST00000429001 RAPGEF2Q9Y4G8 1499 aa15.54■□□□□ 0.08
LARP4-204ENST00000429001 KIF27Q86VH2 1401 aa15.53■□□□□ 0.08
LARP4-204ENST00000429001 TRIM52Q96A61 297 aa15.52■□□□□ 0.08
LARP4-204ENST00000429001 TNIKQ9UKE5 1360 aa15.52■□□□□ 0.07
LARP4-204ENST00000429001 POLR3GLQ9BT43 218 aa15.52■□□□□ 0.07
LARP4-204ENST00000429001 CARMIL1Q5VZK9 1371 aa15.48■□□□□ 0.07
LARP4-204ENST00000429001 ERCC6Q03468 1493 aa15.47■□□□□ 0.07
LARP4-204ENST00000429001 RAD54L2Q9Y4B4 1467 aa15.47■□□□□ 0.07
LARP4-204ENST00000429001 HIRIP3Q9BW71 556 aaPredicted RBP15.46■□□□□ 0.07
LARP4-204ENST00000429001 CEP164Q9UPV0 1460 aa15.45■□□□□ 0.06
LARP4-204ENST00000429001 CC2D2AQ9P2K1 1620 aa15.44■□□□□ 0.06
LARP4-204ENST00000429001 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
LARP4-204ENST00000429001 SYNJ1O43426 1573 aa15.42■□□□□ 0.06
LARP4-204ENST00000429001 ZNF326Q5BKZ1 582 aaKnown RBP15.41■□□□□ 0.06
LARP4-204ENST00000429001 FANCD2Q9BXW9 1451 aa15.41■□□□□ 0.06
LARP4-204ENST00000429001 DIEXFQ68CQ4 756 aaKnown RBP15.4■□□□□ 0.06
LARP4-204ENST00000429001 RRP7BPQ9NSQ0 103 aa15.38■□□□□ 0.05
LARP4-204ENST00000429001 EEA1Q15075 1411 aa15.38■□□□□ 0.05
LARP4-204ENST00000429001 KCNH8Q96L42 1107 aa15.37■□□□□ 0.05
LARP4-204ENST00000429001 SENP3Q9H4L4 574 aaPredicted RBP15.35■□□□□ 0.05
LARP4-204ENST00000429001 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
LARP4-204ENST00000429001 MTUS2Q5JR59 1369 aa15.32■□□□□ 0.04
LARP4-204ENST00000429001 IGF1RP08069 1367 aa15.3■□□□□ 0.04
LARP4-204ENST00000429001 FHOD3Q2V2M9 1422 aa15.29■□□□□ 0.04
LARP4-204ENST00000429001 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
LARP4-204ENST00000429001 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.041e-8■■■■■ 37.4
LARP4-204ENST00000429001 SIN3AQ96ST3 1273 aa15.27■□□□□ 0.04
LARP4-204ENST00000429001 CFTRP13569 1480 aa15.26■□□□□ 0.03
LARP4-204ENST00000429001 CUX1P39880 1505 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms