RNA–Protein interactions for RNA: ENST00000428888.1

AC009495.1-201, humanhuman

TSL 5 BASIC

Gene AC009495.1, Length 372 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009495.1-201ENST00000428888 AEBP2Q6ZN18 517 aaPredicted RBP28.93■■■□□ 2.22
AC009495.1-201ENST00000428888 CHIC1Q5VXU3 224 aa28.02■■■□□ 2.08
AC009495.1-201ENST00000428888 SENP3Q9H4L4 574 aaPredicted RBP24.67■■□□□ 1.54
AC009495.1-201ENST00000428888 PHF23Q9BUL5 403 aaPredicted RBP24.57■■□□□ 1.52
AC009495.1-201ENST00000428888 FOXD1Q16676 465 aa22.88■■□□□ 1.25
AC009495.1-201ENST00000428888 PLPPR3Q6T4P5 718 aa22.66■■□□□ 1.22
AC009495.1-201ENST00000428888 PPP6R1Q9UPN7 881 aa21.77■■□□□ 1.08
AC009495.1-201ENST00000428888 ADRA2BP18089 450 aa21.75■■□□□ 1.07
AC009495.1-201ENST00000428888 PIAS4Q8N2W9 510 aaPredicted RBP21.53■■□□□ 1.04
AC009495.1-201ENST00000428888 MSH5O43196 834 aa21.27■■□□□ 1
AC009495.1-201ENST00000428888 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
AC009495.1-201ENST00000428888 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
AC009495.1-201ENST00000428888 PPP4R3CPQ6ZMV5 832 aa19.9■□□□□ 0.78
AC009495.1-201ENST00000428888 POTEDQ86YR6 584 aa19.82■□□□□ 0.76
AC009495.1-201ENST00000428888 MAPK8IP2Q13387 824 aaPredicted RBP19.8■□□□□ 0.76
AC009495.1-201ENST00000428888 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
AC009495.1-201ENST00000428888 CNKSR2Q8WXI2 1034 aa19.43■□□□□ 0.7
AC009495.1-201ENST00000428888 NCBP3Q53F19 620 aaKnown RBP19.35■□□□□ 0.69
AC009495.1-201ENST00000428888 HOXD11P31277 338 aaPredicted RBP19.12■□□□□ 0.65
AC009495.1-201ENST00000428888 RNF216Q9NWF9 866 aaPredicted RBP19.12■□□□□ 0.65
AC009495.1-201ENST00000428888 KCNA4P22459 653 aa19.09■□□□□ 0.65
AC009495.1-201ENST00000428888 NPM3O75607 178 aaKnown RBP19■□□□□ 0.63
AC009495.1-201ENST00000428888 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
AC009495.1-201ENST00000428888 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
AC009495.1-201ENST00000428888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.51
AC009495.1-201ENST00000428888 RNF39Q9H2S5 420 aa18.18■□□□□ 0.5
AC009495.1-201ENST00000428888 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
AC009495.1-201ENST00000428888 CCDC180Q9P1Z9 1646 aa18.09■□□□□ 0.49
AC009495.1-201ENST00000428888 SLC4A2P04920 1241 aa18■□□□□ 0.47
AC009495.1-201ENST00000428888 C1QBPQ07021 282 aaKnown RBP17.96■□□□□ 0.47
AC009495.1-201ENST00000428888 CACNB1Q02641 598 aaPredicted RBP17.92■□□□□ 0.46
AC009495.1-201ENST00000428888 U3KPZ7 1027 aaPredicted RBP17.87■□□□□ 0.45
AC009495.1-201ENST00000428888 FOXD4L1Q9NU39 408 aa17.69■□□□□ 0.42
AC009495.1-201ENST00000428888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
AC009495.1-201ENST00000428888 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
AC009495.1-201ENST00000428888 MYCNP04198 464 aaPredicted RBP17.6■□□□□ 0.41
AC009495.1-201ENST00000428888 ZBTB22O15209 634 aa17.54■□□□□ 0.4
AC009495.1-201ENST00000428888 SAMD1Q6SPF0 538 aaPredicted RBP17.53■□□□□ 0.4
AC009495.1-201ENST00000428888 APLP2Q06481 763 aa17.52■□□□□ 0.4
AC009495.1-201ENST00000428888 ZCCHC6Q5VYS8 1495 aaKnown RBP17.44■□□□□ 0.38
AC009495.1-201ENST00000428888 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
AC009495.1-201ENST00000428888 CAPN15O75808 1086 aa17.42■□□□□ 0.38
AC009495.1-201ENST00000428888 ZNF219Q9P2Y4 722 aaPredicted RBP17.29■□□□□ 0.36
AC009495.1-201ENST00000428888 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
AC009495.1-201ENST00000428888 DCAF8L2P0C7V8 631 aa17.27■□□□□ 0.36
AC009495.1-201ENST00000428888 TRHP20396 242 aaPredicted RBP17.26■□□□□ 0.35
AC009495.1-201ENST00000428888 CSRNP3Q8WYN3 585 aa17.22■□□□□ 0.35
AC009495.1-201ENST00000428888 ABCC9O60706 1549 aa17.21■□□□□ 0.35
AC009495.1-201ENST00000428888 DSG3P32926 999 aa17.18■□□□□ 0.34
AC009495.1-201ENST00000428888 DCAF1Q9Y4B6 1507 aa17.17■□□□□ 0.34
AC009495.1-201ENST00000428888 ATXN8OSP0DMR3 200 aa17.13■□□□□ 0.33
AC009495.1-201ENST00000428888 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
AC009495.1-201ENST00000428888 ABCB7O75027 752 aa17.03■□□□□ 0.32
AC009495.1-201ENST00000428888 MYO15BQ96JP2 1530 aa16.99■□□□□ 0.31
AC009495.1-201ENST00000428888 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
AC009495.1-201ENST00000428888 POLA2Q14181 598 aa16.92■□□□□ 0.3
AC009495.1-201ENST00000428888 NACADO15069 1562 aa16.92■□□□□ 0.3
AC009495.1-201ENST00000428888 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
AC009495.1-201ENST00000428888 ZBTB12Q9Y330 459 aaPredicted RBP16.68■□□□□ 0.26
AC009495.1-201ENST00000428888 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
AC009495.1-201ENST00000428888 FBLN2P98095 1184 aa16.47■□□□□ 0.23
AC009495.1-201ENST00000428888 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
AC009495.1-201ENST00000428888 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
AC009495.1-201ENST00000428888 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
AC009495.1-201ENST00000428888 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
AC009495.1-201ENST00000428888 UNC13AQ9UPW8 1703 aa16.3■□□□□ 0.2
AC009495.1-201ENST00000428888 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
AC009495.1-201ENST00000428888 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.18
AC009495.1-201ENST00000428888 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
AC009495.1-201ENST00000428888 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
AC009495.1-201ENST00000428888 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
AC009495.1-201ENST00000428888 AKT1S1Q96B36 256 aa16.15■□□□□ 0.18
AC009495.1-201ENST00000428888 CECR2Q9BXF3 1484 aa16.14■□□□□ 0.17
AC009495.1-201ENST00000428888 RSF1Q96T23 1441 aaPredicted RBP16.11■□□□□ 0.17
AC009495.1-201ENST00000428888 BAZ1AQ9NRL2 1556 aaPredicted RBP16.06■□□□□ 0.16
AC009495.1-201ENST00000428888 ZNF692Q9BU19 519 aaPredicted RBP16.05■□□□□ 0.16
AC009495.1-201ENST00000428888 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
AC009495.1-201ENST00000428888 SSUH2Q9Y2M2 353 aa16■□□□□ 0.15
AC009495.1-201ENST00000428888 REM2Q8IYK8 340 aaPredicted RBP15.97■□□□□ 0.15
AC009495.1-201ENST00000428888 SMARCA4P51532 1647 aa15.96■□□□□ 0.15
AC009495.1-201ENST00000428888 SPDYE4A6NLX3 237 aa15.88■□□□□ 0.13
AC009495.1-201ENST00000428888 WIZO95785 1651 aa15.87■□□□□ 0.13
AC009495.1-201ENST00000428888 CHRDL2Q6WN34 429 aa15.83■□□□□ 0.12
AC009495.1-201ENST00000428888 PITPNM1O00562 1244 aa15.78■□□□□ 0.12
AC009495.1-201ENST00000428888 SPDYE1Q8NFV5 336 aaPredicted RBP15.77■□□□□ 0.12
AC009495.1-201ENST00000428888 EIF4G1Q04637 1599 aaKnown RBP15.76■□□□□ 0.11
AC009495.1-201ENST00000428888 TOP2AP11388 1531 aaKnown RBP15.76■□□□□ 0.11
AC009495.1-201ENST00000428888 PEG3Q9GZU2 1588 aa15.75■□□□□ 0.11
AC009495.1-201ENST00000428888 ATAD2BQ9ULI0 1458 aa15.75■□□□□ 0.11
AC009495.1-201ENST00000428888 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
AC009495.1-201ENST00000428888 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
AC009495.1-201ENST00000428888 BAZ1BQ9UIG0 1483 aaKnown RBP15.68■□□□□ 0.1
AC009495.1-201ENST00000428888 POTEHQ6S545 545 aa15.65■□□□□ 0.1
AC009495.1-201ENST00000428888 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
AC009495.1-201ENST00000428888 FKBP8Q14318 412 aa15.61■□□□□ 0.09
AC009495.1-201ENST00000428888 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
AC009495.1-201ENST00000428888 HMGXB3Q12766 1538 aa15.58■□□□□ 0.08
AC009495.1-201ENST00000428888 PROM2Q8N271 834 aa15.56■□□□□ 0.08
AC009495.1-201ENST00000428888 FXR2P51116 673 aaKnown RBP eCLIP15.55■□□□□ 0.08
AC009495.1-201ENST00000428888 PIP4P2Q8N4L2 257 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms