RNA–Protein interactions for RNA: ENST00000427904.1

CLDN12-205, Transcript of claudin 12, humanhuman

TSL 3

Gene CLDN12, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-205ENST00000427904 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
CLDN12-205ENST00000427904 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
CLDN12-205ENST00000427904 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
CLDN12-205ENST00000427904 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
CLDN12-205ENST00000427904 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
CLDN12-205ENST00000427904 FOXD1Q16676 465 aa18.09■□□□□ 0.49
CLDN12-205ENST00000427904 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
CLDN12-205ENST00000427904 ADRA2BP18089 450 aa17.38■□□□□ 0.37
CLDN12-205ENST00000427904 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
CLDN12-205ENST00000427904 PIAS4Q8N2W9 510 aaPredicted RBP17.13■□□□□ 0.33
CLDN12-205ENST00000427904 MSH5O43196 834 aa16.76■□□□□ 0.27
CLDN12-205ENST00000427904 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
CLDN12-205ENST00000427904 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
CLDN12-205ENST00000427904 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
CLDN12-205ENST00000427904 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
CLDN12-205ENST00000427904 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
CLDN12-205ENST00000427904 KCNA4P22459 653 aa15.57■□□□□ 0.08
CLDN12-205ENST00000427904 DMRT2Q9Y5R5 561 aa15.55■□□□□ 0.08
CLDN12-205ENST00000427904 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.08
CLDN12-205ENST00000427904 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
CLDN12-205ENST00000427904 POTEDQ86YR6 584 aa15.3■□□□□ 0.04
CLDN12-205ENST00000427904 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
CLDN12-205ENST00000427904 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
CLDN12-205ENST00000427904 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
CLDN12-205ENST00000427904 ABCC9O60706 1549 aa14.89□□□□□ -0.03
CLDN12-205ENST00000427904 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
CLDN12-205ENST00000427904 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
CLDN12-205ENST00000427904 ZCCHC6Q5VYS8 1495 aaKnown RBP14.78□□□□□ -0.04
CLDN12-205ENST00000427904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.59□□□□□ -0.07
CLDN12-205ENST00000427904 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
CLDN12-205ENST00000427904 DCAF1Q9Y4B6 1507 aa14.55□□□□□ -0.08
CLDN12-205ENST00000427904 NACADO15069 1562 aa14.46□□□□□ -0.09
CLDN12-205ENST00000427904 SLC4A2P04920 1241 aa14.45□□□□□ -0.1
CLDN12-205ENST00000427904 MYO15BQ96JP2 1530 aa14.44□□□□□ -0.1
CLDN12-205ENST00000427904 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
CLDN12-205ENST00000427904 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
CLDN12-205ENST00000427904 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
CLDN12-205ENST00000427904 RNF39Q9H2S5 420 aa14.3□□□□□ -0.12
CLDN12-205ENST00000427904 SCRIBQ14160 1630 aa14.28□□□□□ -0.12
CLDN12-205ENST00000427904 ZBTB22O15209 634 aa14.27□□□□□ -0.13
CLDN12-205ENST00000427904 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
CLDN12-205ENST00000427904 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
CLDN12-205ENST00000427904 UNC13AQ9UPW8 1703 aa14.23□□□□□ -0.13
CLDN12-205ENST00000427904 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
CLDN12-205ENST00000427904 C1QBPQ07021 282 aaKnown RBP14.17□□□□□ -0.14
CLDN12-205ENST00000427904 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
CLDN12-205ENST00000427904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
CLDN12-205ENST00000427904 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
CLDN12-205ENST00000427904 CACNB1Q02641 598 aaPredicted RBP14.07□□□□□ -0.16
CLDN12-205ENST00000427904 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
CLDN12-205ENST00000427904 APLP2Q06481 763 aa14.05□□□□□ -0.16
CLDN12-205ENST00000427904 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
CLDN12-205ENST00000427904 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLDN12-205ENST00000427904 CAPN15O75808 1086 aa13.92□□□□□ -0.18
CLDN12-205ENST00000427904 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
CLDN12-205ENST00000427904 ATXN8OSP0DMR3 200 aa13.86□□□□□ -0.19
CLDN12-205ENST00000427904 DNAJC5Q9H3Z4 198 aa13.86□□□□□ -0.19
CLDN12-205ENST00000427904 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
CLDN12-205ENST00000427904 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
CLDN12-205ENST00000427904 CECR2Q9BXF3 1484 aa13.76□□□□□ -0.21
CLDN12-205ENST00000427904 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
CLDN12-205ENST00000427904 MROH2BQ7Z745 1585 aa13.65□□□□□ -0.22
CLDN12-205ENST00000427904 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
CLDN12-205ENST00000427904 ABCB7O75027 752 aa13.63□□□□□ -0.23
CLDN12-205ENST00000427904 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
CLDN12-205ENST00000427904 EIF4G1Q04637 1599 aaKnown RBP13.61□□□□□ -0.23
CLDN12-205ENST00000427904 DSG3P32926 999 aa13.6□□□□□ -0.23
CLDN12-205ENST00000427904 RSF1Q96T23 1441 aaPredicted RBP13.58□□□□□ -0.24
CLDN12-205ENST00000427904 POLA2Q14181 598 aa13.56□□□□□ -0.24
CLDN12-205ENST00000427904 WIZO95785 1651 aa13.55□□□□□ -0.24
CLDN12-205ENST00000427904 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
CLDN12-205ENST00000427904 CC2D2AQ9P2K1 1620 aa13.48□□□□□ -0.25
CLDN12-205ENST00000427904 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
CLDN12-205ENST00000427904 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
CLDN12-205ENST00000427904 SMARCA2P51531 1590 aa13.41□□□□□ -0.26
CLDN12-205ENST00000427904 ZBTB12Q9Y330 459 aaPredicted RBP13.37□□□□□ -0.27
CLDN12-205ENST00000427904 TOP2AP11388 1531 aaKnown RBP13.36□□□□□ -0.27
CLDN12-205ENST00000427904 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
CLDN12-205ENST00000427904 NCAPD3P42695 1498 aa13.33□□□□□ -0.28
CLDN12-205ENST00000427904 HMGXB3Q12766 1538 aa13.33□□□□□ -0.28
CLDN12-205ENST00000427904 FBLN2P98095 1184 aa13.32□□□□□ -0.28
CLDN12-205ENST00000427904 CCDC88BA6NC98 1476 aa13.21□□□□□ -0.3
CLDN12-205ENST00000427904 MKRN4PQ13434 485 aaPredicted RBP13.16□□□□□ -0.3
CLDN12-205ENST00000427904 OSCARQ8IYS5 282 aa13.1□□□□□ -0.31
CLDN12-205ENST00000427904 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
CLDN12-205ENST00000427904 NESP48681 1621 aa13.02□□□□□ -0.32
CLDN12-205ENST00000427904 TRIM41Q8WV44 630 aa13.02□□□□□ -0.33
CLDN12-205ENST00000427904 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
CLDN12-205ENST00000427904 CFTRP13569 1480 aa12.98□□□□□ -0.33
CLDN12-205ENST00000427904 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
CLDN12-205ENST00000427904 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
CLDN12-205ENST00000427904 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
CLDN12-205ENST00000427904 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
CLDN12-205ENST00000427904 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
CLDN12-205ENST00000427904 ZNF692Q9BU19 519 aaPredicted RBP12.94□□□□□ -0.34
CLDN12-205ENST00000427904 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
CLDN12-205ENST00000427904 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
CLDN12-205ENST00000427904 FKBP8Q14318 412 aa12.9□□□□□ -0.34
CLDN12-205ENST00000427904 KIF21AQ7Z4S6 1674 aa12.89□□□□□ -0.35
CLDN12-205ENST00000427904 CUX2O14529 1486 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms