RNA–Protein interactions for RNA: ENST00000427841.5

SDHAP1-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 2

Gene SDHAP1, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-205ENST00000427841 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
SDHAP1-205ENST00000427841 CCDC180Q9P1Z9 1646 aa31.19■■■□□ 2.58
SDHAP1-205ENST00000427841 ZCCHC6Q5VYS8 1495 aaKnown RBP30.65■■■□□ 2.5
SDHAP1-205ENST00000427841 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
SDHAP1-205ENST00000427841 DCAF8L2P0C7V8 631 aa30.1■■■□□ 2.41
SDHAP1-205ENST00000427841 DCAF1Q9Y4B6 1507 aa29.89■■■□□ 2.37
SDHAP1-205ENST00000427841 SUPT5HO00267 1087 aaKnown RBP29.65■■■□□ 2.34
SDHAP1-205ENST00000427841 MYO15BQ96JP2 1530 aa29.22■■■□□ 2.27
SDHAP1-205ENST00000427841 ABCC9O60706 1549 aa29.17■■■□□ 2.26
SDHAP1-205ENST00000427841 SCRIBQ14160 1630 aa29.04■■■□□ 2.24
SDHAP1-205ENST00000427841 NACADO15069 1562 aa28.93■■■□□ 2.22
SDHAP1-205ENST00000427841 CHIC1Q5VXU3 224 aa28.66■■■□□ 2.18
SDHAP1-205ENST00000427841 RB1CC1Q8TDY2 1594 aa28.54■■■□□ 2.16
SDHAP1-205ENST00000427841 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
SDHAP1-205ENST00000427841 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.13
SDHAP1-205ENST00000427841 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.11
SDHAP1-205ENST00000427841 UNC13AQ9UPW8 1703 aa28.13■■■□□ 2.09
SDHAP1-205ENST00000427841 WIZO95785 1651 aa28.03■■■□□ 2.08
SDHAP1-205ENST00000427841 BAZ1AQ9NRL2 1556 aaPredicted RBP27.95■■■□□ 2.07
SDHAP1-205ENST00000427841 BICRAQ9NZM4 1560 aa27.79■■■□□ 2.04
SDHAP1-205ENST00000427841 SMARCA4P51532 1647 aa27.78■■■□□ 2.04
SDHAP1-205ENST00000427841 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.04
SDHAP1-205ENST00000427841 LOC105371045A0A1W2PR82 267 aa27.74■■■□□ 2.03
SDHAP1-205ENST00000427841 TRIM41Q8WV44 630 aa27.7■■■□□ 2.02
SDHAP1-205ENST00000427841 TOP2AP11388 1531 aaKnown RBP27.61■■■□□ 2.01
SDHAP1-205ENST00000427841 EIF4G1Q04637 1599 aaKnown RBP27.48■■□□□ 1.99
SDHAP1-205ENST00000427841 CCDC88BA6NC98 1476 aa27.45■■□□□ 1.99
SDHAP1-205ENST00000427841 SMARCA2P51531 1590 aa27.44■■□□□ 1.98
SDHAP1-205ENST00000427841 FAM9AQ8IZU1 332 aaPredicted RBP27.39■■□□□ 1.98
SDHAP1-205ENST00000427841 PEG3Q9GZU2 1588 aa27.32■■□□□ 1.96
SDHAP1-205ENST00000427841 PCGF6Q9BYE7 350 aa27.19■■□□□ 1.94
SDHAP1-205ENST00000427841 ABCC8Q09428 1581 aa27.19■■□□□ 1.94
SDHAP1-205ENST00000427841 ATAD2BQ9ULI0 1458 aa27.18■■□□□ 1.94
SDHAP1-205ENST00000427841 EHMT2Q96KQ7 1210 aa27.11■■□□□ 1.93
SDHAP1-205ENST00000427841 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
SDHAP1-205ENST00000427841 HRCP23327 699 aa26.89■■□□□ 1.9
SDHAP1-205ENST00000427841 TRIM26Q12899 539 aaPredicted RBP26.85■■□□□ 1.89
SDHAP1-205ENST00000427841 SOGA1O94964 1423 aa26.83■■□□□ 1.89
SDHAP1-205ENST00000427841 WRNQ14191 1432 aaPredicted RBP eCLIP26.81■■□□□ 1.88
SDHAP1-205ENST00000427841 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
SDHAP1-205ENST00000427841 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
SDHAP1-205ENST00000427841 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
SDHAP1-205ENST00000427841 SYNJ1O43426 1573 aa26.71■■□□□ 1.87
SDHAP1-205ENST00000427841 EEA1Q15075 1411 aa26.66■■□□□ 1.86
SDHAP1-205ENST00000427841 CSRNP3Q8WYN3 585 aa26.64■■□□□ 1.86
SDHAP1-205ENST00000427841 TNIKQ9UKE5 1360 aa26.5■■□□□ 1.83
SDHAP1-205ENST00000427841 CEP162Q5TB80 1403 aa26.48■■□□□ 1.83
SDHAP1-205ENST00000427841 PPARGC1BQ86YN6 1023 aaKnown RBP26.46■■□□□ 1.83
SDHAP1-205ENST00000427841 TOP2BQ02880 1626 aa26.46■■□□□ 1.83
SDHAP1-205ENST00000427841 UBTFP17480 764 aaKnown RBP26.44■■□□□ 1.82
SDHAP1-205ENST00000427841 GOLGA3Q08378 1498 aa26.43■■□□□ 1.82
SDHAP1-205ENST00000427841 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.82
SDHAP1-205ENST00000427841 CFTRP13569 1480 aa26.39■■□□□ 1.82
SDHAP1-205ENST00000427841 CEP164Q9UPV0 1460 aa26.35■■□□□ 1.81
SDHAP1-205ENST00000427841 KIF21BO75037 1637 aa26.34■■□□□ 1.81
SDHAP1-205ENST00000427841 CC2D2AQ9P2K1 1620 aa26.33■■□□□ 1.8
SDHAP1-205ENST00000427841 CUX1P39880 1505 aa26.29■■□□□ 1.8
SDHAP1-205ENST00000427841 RAPGEF2Q9Y4G8 1499 aa26.21■■□□□ 1.79
SDHAP1-205ENST00000427841 PRDM2Q13029 1718 aa26.21■■□□□ 1.79
SDHAP1-205ENST00000427841 CADPSQ9ULU8 1353 aa26.18■■□□□ 1.78
SDHAP1-205ENST00000427841 TTBK1Q5TCY1 1321 aaPredicted RBP26.11■■□□□ 1.77
SDHAP1-205ENST00000427841 CLIP1P30622 1438 aa26.09■■□□□ 1.77
SDHAP1-205ENST00000427841 PRXQ9BXM0 1461 aa26.05■■□□□ 1.76
SDHAP1-205ENST00000427841 ZEB1P37275 1124 aaPredicted RBP26.04■■□□□ 1.76
SDHAP1-205ENST00000427841 KIF27Q86VH2 1401 aa26.03■■□□□ 1.76
SDHAP1-205ENST00000427841 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
SDHAP1-205ENST00000427841 RANGAP1P46060 587 aaPredicted RBP25.98■■□□□ 1.75
SDHAP1-205ENST00000427841 VPS8Q8N3P4 1428 aa25.93■■□□□ 1.74
SDHAP1-205ENST00000427841 FANCD2Q9BXW9 1451 aa25.92■■□□□ 1.74
SDHAP1-205ENST00000427841 FGD5Q6ZNL6 1462 aa25.89■■□□□ 1.74
SDHAP1-205ENST00000427841 CUX2O14529 1486 aa25.87■■□□□ 1.73
SDHAP1-205ENST00000427841 NESP48681 1621 aa25.87■■□□□ 1.73
SDHAP1-205ENST00000427841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.85■■□□□ 1.73
SDHAP1-205ENST00000427841 IGF1RP08069 1367 aa25.8■■□□□ 1.72
SDHAP1-205ENST00000427841 ARAP1Q96P48 1450 aa25.76■■□□□ 1.71
SDHAP1-205ENST00000427841 CCER1Q8TC90 406 aaPredicted RBP25.74■■□□□ 1.71
SDHAP1-205ENST00000427841 DNMBPQ6XZF7 1577 aa25.74■■□□□ 1.71
SDHAP1-205ENST00000427841 APLP2Q06481 763 aa25.73■■□□□ 1.71
SDHAP1-205ENST00000427841 DNAJC5BQ9UF47 199 aa25.73■■□□□ 1.71
SDHAP1-205ENST00000427841 TOPBP1Q92547 1522 aa25.7■■□□□ 1.71
SDHAP1-205ENST00000427841 LAMC3Q9Y6N6 1575 aa25.7■■□□□ 1.7
SDHAP1-205ENST00000427841 CARMIL1Q5VZK9 1371 aa25.68■■□□□ 1.7
SDHAP1-205ENST00000427841 RAD54L2Q9Y4B4 1467 aa25.67■■□□□ 1.7
SDHAP1-205ENST00000427841 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
SDHAP1-205ENST00000427841 ARHGAP35Q9NRY4 1499 aa25.63■■□□□ 1.69
SDHAP1-205ENST00000427841 ABCA10Q8WWZ4 1543 aa25.6■■□□□ 1.69
SDHAP1-205ENST00000427841 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
SDHAP1-205ENST00000427841 HNRNPUL2Q1KMD3 747 aaKnown RBP25.54■■□□□ 1.68
SDHAP1-205ENST00000427841 PDS5BQ9NTI5 1447 aa25.52■■□□□ 1.68
SDHAP1-205ENST00000427841 KANK4Q5T7N3 995 aaPredicted RBP25.52■■□□□ 1.68
SDHAP1-205ENST00000427841 KIF21AQ7Z4S6 1674 aa25.46■■□□□ 1.67
SDHAP1-205ENST00000427841 WDR97A6NE52 1622 aa25.44■■□□□ 1.66
SDHAP1-205ENST00000427841 CUL7Q14999 1698 aa25.39■■□□□ 1.66
SDHAP1-205ENST00000427841 TDRD9Q8NDG6 1382 aaKnown RBP25.37■■□□□ 1.65
SDHAP1-205ENST00000427841 ABCA5Q8WWZ7 1642 aa25.34■■□□□ 1.65
SDHAP1-205ENST00000427841 P3H3Q8IVL6 736 aa25.31■■□□□ 1.64
SDHAP1-205ENST00000427841 GAPVD1Q14C86 1478 aa25.3■■□□□ 1.64
SDHAP1-205ENST00000427841 CTTNBP2Q8WZ74 1663 aa25.27■■□□□ 1.64
SDHAP1-205ENST00000427841 RRBP1Q9P2E9 1410 aaKnown RBP25.27■■□□□ 1.64
SDHAP1-205ENST00000427841 TIAM1Q13009 1591 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms