RNA–Protein interactions for RNA: ENST00000427704.6

PHACTR2-207, Transcript of phosphatase and actin regulator 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR2, Length 9,531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR2-207ENST00000427704 MYT1Q01538 1121 aa10.19□□□□□ -0.78
PHACTR2-207ENST00000427704 PELP1Q8IZL8 1130 aaKnown RBP10.13□□□□□ -0.79
PHACTR2-207ENST00000427704 TTBK1Q5TCY1 1321 aaPredicted RBP9.52□□□□□ -0.89
PHACTR2-207ENST00000427704 ERICH6Q7L0X2 663 aa9.24□□□□□ -0.93
PHACTR2-207ENST00000427704 CENPBP07199 599 aaPredicted RBP9.14□□□□□ -0.95
PHACTR2-207ENST00000427704 CCER1Q8TC90 406 aaPredicted RBP8.98□□□□□ -0.97
PHACTR2-207ENST00000427704 ZEB1P37275 1124 aaPredicted RBP8.97□□□□□ -0.97
PHACTR2-207ENST00000427704 HRCP23327 699 aa8.87□□□□□ -0.99
PHACTR2-207ENST00000427704 YTHDC1Q96MU7 727 aaKnown RBP8.8□□□□□ -1
PHACTR2-207ENST00000427704 PCGF6Q9BYE7 350 aa8.74□□□□□ -1.01
PHACTR2-207ENST00000427704 NEFLP07196 543 aa8.63□□□□□ -1.03
PHACTR2-207ENST00000427704 MYT1LQ9UL68 1186 aa8.6□□□□□ -1.03
PHACTR2-207ENST00000427704 GLIPR1L2Q4G1C9 344 aa8.59□□□□□ -1.03
PHACTR2-207ENST00000427704 RTL5Q5HYW3 569 aaPredicted RBP8.55□□□□□ -1.04
PHACTR2-207ENST00000427704 BCL11AQ9H165 835 aa8.5□□□□□ -1.05
PHACTR2-207ENST00000427704 CLSPNQ9HAW4 1339 aa8.5□□□□□ -1.05
PHACTR2-207ENST00000427704 SLC24A1O60721 1099 aa8.49□□□□□ -1.05
PHACTR2-207ENST00000427704 GTF3C3Q9Y5Q9 886 aa8.46□□□□□ -1.06
PHACTR2-207ENST00000427704 ACIN1Q9UKV3 1341 aaKnown RBP8.46□□□□□ -1.06
PHACTR2-207ENST00000427704 RANGAP1P46060 587 aaPredicted RBP8.46□□□□□ -1.06
PHACTR2-207ENST00000427704 SUPT5HO00267 1087 aaKnown RBP8.41□□□□□ -1.06
PHACTR2-207ENST00000427704 TRIM26Q12899 539 aaPredicted RBP8.38□□□□□ -1.07
PHACTR2-207ENST00000427704 NISCHQ9Y2I1 1504 aa8.37□□□□□ -1.07
PHACTR2-207ENST00000427704 PPARGC1BQ86YN6 1023 aaKnown RBP8.37□□□□□ -1.07
PHACTR2-207ENST00000427704 ANP32EQ9BTT0 268 aa8.36□□□□□ -1.07
PHACTR2-207ENST00000427704 SCAF1Q9H7N4 1312 aaKnown RBP8.35□□□□□ -1.07
PHACTR2-207ENST00000427704 DAXXQ9UER7 740 aaPredicted RBP8.33□□□□□ -1.08
PHACTR2-207ENST00000427704 EIF5BO60841 1220 aaKnown RBP8.32□□□□□ -1.08
PHACTR2-207ENST00000427704 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
PHACTR2-207ENST00000427704 DIEXFQ68CQ4 756 aaKnown RBP8.27□□□□□ -1.09
PHACTR2-207ENST00000427704 ZNF316A6NFI3 1004 aaPredicted RBP8.23□□□□□ -1.09
PHACTR2-207ENST00000427704 APLP2Q06481 763 aa8.16□□□□□ -1.1
PHACTR2-207ENST00000427704 ERICH6BQ5W0A0 696 aa8.16□□□□□ -1.1
PHACTR2-207ENST00000427704 CDK11AQ9UQ88 783 aaPredicted RBP8.15□□□□□ -1.1
PHACTR2-207ENST00000427704 DCAF8L2P0C7V8 631 aa8.13□□□□□ -1.11
PHACTR2-207ENST00000427704 NEUROD1Q13562 356 aa8.11□□□□□ -1.11
PHACTR2-207ENST00000427704 ANP32AP39687 249 aaKnown RBP8.11□□□□□ -1.11
PHACTR2-207ENST00000427704 FAM9AQ8IZU1 332 aaPredicted RBP8.06□□□□□ -1.12
PHACTR2-207ENST00000427704 SHROOM4Q9ULL8 1493 aa8.05□□□□□ -1.12
PHACTR2-207ENST00000427704 DCAF1Q9Y4B6 1507 aa8.04□□□□□ -1.12
PHACTR2-207ENST00000427704 BCANQ96GW7 911 aa8.04□□□□□ -1.12
PHACTR2-207ENST00000427704 NCLP19338 710 aaKnown RBP8.03□□□□□ -1.12
PHACTR2-207ENST00000427704 TNNT2P45379 298 aaPredicted RBP8.02□□□□□ -1.13
PHACTR2-207ENST00000427704 CCDC180Q9P1Z9 1646 aa8□□□□□ -1.13
PHACTR2-207ENST00000427704 PKNOX2Q96KN3 472 aa7.99□□□□□ -1.13
PHACTR2-207ENST00000427704 CSRNP3Q8WYN3 585 aa7.96□□□□□ -1.13
PHACTR2-207ENST00000427704 ZNF326Q5BKZ1 582 aaKnown RBP7.96□□□□□ -1.13
PHACTR2-207ENST00000427704 PODXL2Q9NZ53 605 aa7.96□□□□□ -1.13
PHACTR2-207ENST00000427704 CDK11BP21127 795 aaKnown RBP7.94□□□□□ -1.14
PHACTR2-207ENST00000427704 DEKP35659 375 aaKnown RBP7.93□□□□□ -1.14
PHACTR2-207ENST00000427704 NEFMP07197 916 aa7.93□□□□□ -1.14
PHACTR2-207ENST00000427704 NBR1Q14596 966 aa7.92□□□□□ -1.14
PHACTR2-207ENST00000427704 ANP32BQ92688 251 aaKnown RBP7.92□□□□□ -1.14
PHACTR2-207ENST00000427704 TRIM44Q96DX7 344 aaPredicted RBP7.92□□□□□ -1.14
PHACTR2-207ENST00000427704 EHMT2Q96KQ7 1210 aa7.91□□□□□ -1.14
PHACTR2-207ENST00000427704 RSPH6AQ9H0K4 717 aa7.9□□□□□ -1.14
PHACTR2-207ENST00000427704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.88□□□□□ -1.15
PHACTR2-207ENST00000427704 ZBTB47Q9UFB7 747 aaPredicted RBP7.87□□□□□ -1.15
PHACTR2-207ENST00000427704 CHIC1Q5VXU3 224 aa7.86□□□□□ -1.15
PHACTR2-207ENST00000427704 FKBP8Q14318 412 aa7.85□□□□□ -1.15
PHACTR2-207ENST00000427704 TRIM41Q8WV44 630 aa7.85□□□□□ -1.15
PHACTR2-207ENST00000427704 NAP1L5Q96NT1 182 aaPredicted RBP7.84□□□□□ -1.15
PHACTR2-207ENST00000427704 UBE2Q2Q8WVN8 375 aa7.83□□□□□ -1.16
PHACTR2-207ENST00000427704 NOP58Q9Y2X3 529 aaKnown RBP7.83□□□□□ -1.16
PHACTR2-207ENST00000427704 RTN4Q9NQC3 1192 aaKnown RBP7.83□□□□□ -1.16
PHACTR2-207ENST00000427704 PPM1GO15355 546 aaPredicted RBP7.82□□□□□ -1.16
PHACTR2-207ENST00000427704 HSP90AA1P07900 732 aaKnown RBP7.81□□□□□ -1.16
PHACTR2-207ENST00000427704 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.8□□□□□ -1.16
PHACTR2-207ENST00000427704 CNGB1Q14028 1251 aaPredicted RBP7.8□□□□□ -1.16
PHACTR2-207ENST00000427704 SUPT16HQ9Y5B9 1047 aaKnown RBP7.79□□□□□ -1.16
PHACTR2-207ENST00000427704 POLR3GLQ9BT43 218 aa7.79□□□□□ -1.16
PHACTR2-207ENST00000427704 DDRGK1Q96HY6 314 aa7.78□□□□□ -1.16
PHACTR2-207ENST00000427704 ANP32CO43423 234 aa7.78□□□□□ -1.16
PHACTR2-207ENST00000427704 VSIG10Q8N0Z9 540 aa7.77□□□□□ -1.17
PHACTR2-207ENST00000427704 PTMSP20962 102 aa7.77□□□□□ -1.17
PHACTR2-207ENST00000427704 CCDC136Q96JN2 1154 aa7.76□□□□□ -1.17
PHACTR2-207ENST00000427704 NPM2Q86SE8 214 aaKnown RBP7.75□□□□□ -1.17
PHACTR2-207ENST00000427704 HSP90AA2PQ14568 343 aaPredicted RBP7.75□□□□□ -1.17
PHACTR2-207ENST00000427704 TSHZ2Q9NRE2 1034 aa7.73□□□□□ -1.17
PHACTR2-207ENST00000427704 L1TD1Q5T7N2 865 aaKnown RBP7.72□□□□□ -1.17
PHACTR2-207ENST00000427704 A0A0U1RQG5 324 aaPredicted RBP7.72□□□□□ -1.17
PHACTR2-207ENST00000427704 RBM19Q9Y4C8 960 aaKnown RBP7.71□□□□□ -1.17
PHACTR2-207ENST00000427704 PNNQ9H307 717 aaKnown RBP7.69□□□□□ -1.18
PHACTR2-207ENST00000427704 ANO8Q9HCE9 1232 aaPredicted RBP7.68□□□□□ -1.18
PHACTR2-207ENST00000427704 PDE4CQ08493 712 aa7.67□□□□□ -1.18
PHACTR2-207ENST00000427704 USP35Q9P2H5 1018 aa7.67□□□□□ -1.18
PHACTR2-207ENST00000427704 LOC105371045A0A1W2PR82 267 aa7.66□□□□□ -1.18
PHACTR2-207ENST00000427704 UPF2Q9HAU5 1272 aaKnown RBP7.66□□□□□ -1.18
PHACTR2-207ENST00000427704 MIER1Q8N108 512 aa7.66□□□□□ -1.18
PHACTR2-207ENST00000427704 FANCIQ9NVI1 1328 aa7.65□□□□□ -1.18
PHACTR2-207ENST00000427704 BECN1Q14457 450 aa7.64□□□□□ -1.19
PHACTR2-207ENST00000427704 UBTFP17480 764 aaKnown RBP7.63□□□□□ -1.19
PHACTR2-207ENST00000427704 CANXP27824 592 aaKnown RBP7.62□□□□□ -1.19
PHACTR2-207ENST00000427704 HNRNPUL2Q1KMD3 747 aaKnown RBP7.62□□□□□ -1.19
PHACTR2-207ENST00000427704 ARID4BQ4LE39 1312 aaPredicted RBP7.61□□□□□ -1.19
PHACTR2-207ENST00000427704 ITGAEP38570 1179 aa7.61□□□□□ -1.19
PHACTR2-207ENST00000427704 SALL2Q9Y467 1007 aaPredicted RBP7.61□□□□□ -1.19
PHACTR2-207ENST00000427704 LAS1LQ9Y4W2 734 aaKnown RBP7.61□□□□□ -1.19
PHACTR2-207ENST00000427704 PPP4R2Q9NY27 417 aa7.59□□□□□ -1.19
PHACTR2-207ENST00000427704 TNNT3P45378 269 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms