RNA–Protein interactions for RNA: ENST00000427699.5

ABCC3-202, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCC3, Length 1,881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-202ENST00000427699 NISCHQ9Y2I1 1504 aa38.09■■■■□ 3.69
ABCC3-202ENST00000427699 CCDC180Q9P1Z9 1646 aa32.87■■■□□ 2.85
ABCC3-202ENST00000427699 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
ABCC3-202ENST00000427699 SHROOM4Q9ULL8 1493 aa31.69■■■□□ 2.66
ABCC3-202ENST00000427699 DCAF1Q9Y4B6 1507 aa31.46■■■□□ 2.63
ABCC3-202ENST00000427699 DCAF8L2P0C7V8 631 aa31.21■■■□□ 2.59
ABCC3-202ENST00000427699 ABCC9O60706 1549 aa30.91■■■□□ 2.54
ABCC3-202ENST00000427699 SUPT5HO00267 1087 aaKnown RBP30.84■■■□□ 2.53
ABCC3-202ENST00000427699 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.52
ABCC3-202ENST00000427699 SCRIBQ14160 1630 aa30.39■■■□□ 2.46
ABCC3-202ENST00000427699 NACADO15069 1562 aa30.38■■■□□ 2.45
ABCC3-202ENST00000427699 RB1CC1Q8TDY2 1594 aa29.95■■■□□ 2.39
ABCC3-202ENST00000427699 CHIC1Q5VXU3 224 aa29.93■■■□□ 2.38
ABCC3-202ENST00000427699 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
ABCC3-202ENST00000427699 CECR2Q9BXF3 1484 aa29.57■■■□□ 2.32
ABCC3-202ENST00000427699 UNC13AQ9UPW8 1703 aa29.55■■■□□ 2.32
ABCC3-202ENST00000427699 MROH2BQ7Z745 1585 aa29.49■■■□□ 2.31
ABCC3-202ENST00000427699 WIZO95785 1651 aa29.35■■■□□ 2.29
ABCC3-202ENST00000427699 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
ABCC3-202ENST00000427699 SMARCA4P51532 1647 aa29.15■■■□□ 2.26
ABCC3-202ENST00000427699 BICRAQ9NZM4 1560 aa29.09■■■□□ 2.25
ABCC3-202ENST00000427699 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.23
ABCC3-202ENST00000427699 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
ABCC3-202ENST00000427699 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
ABCC3-202ENST00000427699 EIF4G1Q04637 1599 aaKnown RBP28.89■■■□□ 2.22
ABCC3-202ENST00000427699 LOC105371045A0A1W2PR82 267 aa28.85■■■□□ 2.21
ABCC3-202ENST00000427699 SMARCA2P51531 1590 aa28.77■■■□□ 2.2
ABCC3-202ENST00000427699 PEG3Q9GZU2 1588 aa28.73■■■□□ 2.19
ABCC3-202ENST00000427699 CCDC88BA6NC98 1476 aa28.71■■■□□ 2.19
ABCC3-202ENST00000427699 FAM9AQ8IZU1 332 aaPredicted RBP28.45■■■□□ 2.15
ABCC3-202ENST00000427699 ABCC8Q09428 1581 aa28.43■■■□□ 2.14
ABCC3-202ENST00000427699 ATAD2BQ9ULI0 1458 aa28.43■■■□□ 2.14
ABCC3-202ENST00000427699 DNAJC5BQ9UF47 199 aa28.38■■■□□ 2.13
ABCC3-202ENST00000427699 PCGF6Q9BYE7 350 aa28.36■■■□□ 2.13
ABCC3-202ENST00000427699 BAZ1BQ9UIG0 1483 aaKnown RBP28.32■■■□□ 2.12
ABCC3-202ENST00000427699 HRCP23327 699 aa28.19■■■□□ 2.1
ABCC3-202ENST00000427699 TRIM26Q12899 539 aaPredicted RBP28.12■■■□□ 2.09
ABCC3-202ENST00000427699 HMGXB3Q12766 1538 aa28.08■■■□□ 2.09
ABCC3-202ENST00000427699 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
ABCC3-202ENST00000427699 EHMT2Q96KQ7 1210 aa28.06■■■□□ 2.08
ABCC3-202ENST00000427699 EEA1Q15075 1411 aa28.05■■■□□ 2.08
ABCC3-202ENST00000427699 NCAPD3P42695 1498 aa28.01■■■□□ 2.08
ABCC3-202ENST00000427699 SOGA1O94964 1423 aa28.01■■■□□ 2.07
ABCC3-202ENST00000427699 SYNJ1O43426 1573 aa27.99■■■□□ 2.07
ABCC3-202ENST00000427699 RUSC2Q8N2Y8 1516 aa27.88■■■□□ 2.05
ABCC3-202ENST00000427699 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
ABCC3-202ENST00000427699 CSRNP3Q8WYN3 585 aa27.83■■■□□ 2.04
ABCC3-202ENST00000427699 TOP2BQ02880 1626 aa27.79■■■□□ 2.04
ABCC3-202ENST00000427699 TNIKQ9UKE5 1360 aa27.78■■■□□ 2.04
ABCC3-202ENST00000427699 BIVM-ERCC5R4GMW8 1640 aa27.77■■■□□ 2.04
ABCC3-202ENST00000427699 GOLGA3Q08378 1498 aa27.74■■■□□ 2.03
ABCC3-202ENST00000427699 CEP162Q5TB80 1403 aa27.73■■■□□ 2.03
ABCC3-202ENST00000427699 KIF21BO75037 1637 aa27.72■■■□□ 2.03
ABCC3-202ENST00000427699 PRDM2Q13029 1718 aa27.68■■■□□ 2.02
ABCC3-202ENST00000427699 CEP164Q9UPV0 1460 aa27.65■■■□□ 2.02
ABCC3-202ENST00000427699 CFTRP13569 1480 aa27.64■■■□□ 2.01
ABCC3-202ENST00000427699 UBTFP17480 764 aaKnown RBP27.56■■■□□ 2
ABCC3-202ENST00000427699 CUX1P39880 1505 aa27.52■■■□□ 2
ABCC3-202ENST00000427699 PPARGC1BQ86YN6 1023 aaKnown RBP27.46■■□□□ 1.99
ABCC3-202ENST00000427699 RAPGEF2Q9Y4G8 1499 aa27.41■■□□□ 1.98
ABCC3-202ENST00000427699 ZEB1P37275 1124 aaPredicted RBP27.38■■□□□ 1.97
ABCC3-202ENST00000427699 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
ABCC3-202ENST00000427699 CADPSQ9ULU8 1353 aa27.35■■□□□ 1.97
ABCC3-202ENST00000427699 CLIP1P30622 1438 aa27.32■■□□□ 1.96
ABCC3-202ENST00000427699 PRXQ9BXM0 1461 aa27.3■■□□□ 1.96
ABCC3-202ENST00000427699 KIF27Q86VH2 1401 aa27.27■■□□□ 1.96
ABCC3-202ENST00000427699 VPS8Q8N3P4 1428 aa27.2■■□□□ 1.94
ABCC3-202ENST00000427699 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
ABCC3-202ENST00000427699 FGD5Q6ZNL6 1462 aa27.09■■□□□ 1.93
ABCC3-202ENST00000427699 TTBK1Q5TCY1 1321 aaPredicted RBP27.08■■□□□ 1.93
ABCC3-202ENST00000427699 CUX2O14529 1486 aa27.04■■□□□ 1.92
ABCC3-202ENST00000427699 DNMBPQ6XZF7 1577 aa27.02■■□□□ 1.92
ABCC3-202ENST00000427699 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
ABCC3-202ENST00000427699 LAMC3Q9Y6N6 1575 aa26.98■■□□□ 1.91
ABCC3-202ENST00000427699 NESP48681 1621 aa26.95■■□□□ 1.9
ABCC3-202ENST00000427699 IGF1RP08069 1367 aa26.94■■□□□ 1.9
ABCC3-202ENST00000427699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.93■■□□□ 1.9
ABCC3-202ENST00000427699 RANGAP1P46060 587 aaPredicted RBP26.93■■□□□ 1.9
ABCC3-202ENST00000427699 TOPBP1Q92547 1522 aa26.91■■□□□ 1.9
ABCC3-202ENST00000427699 APLP2Q06481 763 aa26.9■■□□□ 1.9
ABCC3-202ENST00000427699 CCER1Q8TC90 406 aaPredicted RBP26.89■■□□□ 1.9
ABCC3-202ENST00000427699 ABCA10Q8WWZ4 1543 aa26.84■■□□□ 1.89
ABCC3-202ENST00000427699 POLA1P09884 1462 aaPredicted RBP26.84■■□□□ 1.89
ABCC3-202ENST00000427699 ARHGAP35Q9NRY4 1499 aa26.83■■□□□ 1.89
ABCC3-202ENST00000427699 CARMIL1Q5VZK9 1371 aa26.82■■□□□ 1.88
ABCC3-202ENST00000427699 WDR97A6NE52 1622 aa26.77■■□□□ 1.88
ABCC3-202ENST00000427699 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
ABCC3-202ENST00000427699 URB2Q14146 1524 aaKnown RBP26.74■■□□□ 1.87
ABCC3-202ENST00000427699 CUL7Q14999 1698 aa26.73■■□□□ 1.87
ABCC3-202ENST00000427699 KIF21AQ7Z4S6 1674 aa26.69■■□□□ 1.86
ABCC3-202ENST00000427699 PDS5BQ9NTI5 1447 aa26.69■■□□□ 1.86
ABCC3-202ENST00000427699 CTTNBP2Q8WZ74 1663 aa26.62■■□□□ 1.85
ABCC3-202ENST00000427699 ABCA5Q8WWZ7 1642 aa26.61■■□□□ 1.85
ABCC3-202ENST00000427699 HNRNPUL2Q1KMD3 747 aaKnown RBP26.59■■□□□ 1.85
ABCC3-202ENST00000427699 KANK4Q5T7N3 995 aaPredicted RBP26.58■■□□□ 1.85
ABCC3-202ENST00000427699 MAP3K1Q13233 1512 aa26.57■■□□□ 1.84
ABCC3-202ENST00000427699 ERCC6Q03468 1493 aa26.54■■□□□ 1.84
ABCC3-202ENST00000427699 TIAM1Q13009 1591 aa26.53■■□□□ 1.84
ABCC3-202ENST00000427699 RRBP1Q9P2E9 1410 aaKnown RBP26.52■■□□□ 1.84
ABCC3-202ENST00000427699 EFCAB5A4FU69 1503 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms