RNA–Protein interactions for RNA: ENST00000427568.1

AC079248.1-201, humanhuman

BASIC

Gene AC079248.1, Length 1,546 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079248.1-201ENST00000427568 AEBP2Q6ZN18 517 aaPredicted RBP25.73■■□□□ 1.71
AC079248.1-201ENST00000427568 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
AC079248.1-201ENST00000427568 PHF23Q9BUL5 403 aaPredicted RBP21.93■■□□□ 1.1
AC079248.1-201ENST00000427568 SENP3Q9H4L4 574 aaPredicted RBP21.76■■□□□ 1.07
AC079248.1-201ENST00000427568 FOXD1Q16676 465 aa20.27■□□□□ 0.84
AC079248.1-201ENST00000427568 PLPPR3Q6T4P5 718 aa20.09■□□□□ 0.81
AC079248.1-201ENST00000427568 PPP6R1Q9UPN7 881 aa19.41■□□□□ 0.7
AC079248.1-201ENST00000427568 ADRA2BP18089 450 aa19.33■□□□□ 0.68
AC079248.1-201ENST00000427568 PIAS4Q8N2W9 510 aaPredicted RBP19.01■□□□□ 0.63
AC079248.1-201ENST00000427568 MSH5O43196 834 aa18.7■□□□□ 0.58
AC079248.1-201ENST00000427568 NISCHQ9Y2I1 1504 aa17.95■□□□□ 0.46
AC079248.1-201ENST00000427568 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
AC079248.1-201ENST00000427568 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
AC079248.1-201ENST00000427568 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
AC079248.1-201ENST00000427568 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
AC079248.1-201ENST00000427568 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
AC079248.1-201ENST00000427568 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
AC079248.1-201ENST00000427568 KCNA4P22459 653 aa17.11■□□□□ 0.33
AC079248.1-201ENST00000427568 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
AC079248.1-201ENST00000427568 HOXD11P31277 338 aaPredicted RBP16.97■□□□□ 0.31
AC079248.1-201ENST00000427568 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.3
AC079248.1-201ENST00000427568 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.3
AC079248.1-201ENST00000427568 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
AC079248.1-201ENST00000427568 ABCC9O60706 1549 aa16.57■□□□□ 0.24
AC079248.1-201ENST00000427568 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
AC079248.1-201ENST00000427568 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
AC079248.1-201ENST00000427568 CCDC180Q9P1Z9 1646 aa16.24■□□□□ 0.19
AC079248.1-201ENST00000427568 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
AC079248.1-201ENST00000427568 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
AC079248.1-201ENST00000427568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.07■□□□□ 0.16
AC079248.1-201ENST00000427568 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
AC079248.1-201ENST00000427568 U3KPZ7 1027 aaPredicted RBP15.89■□□□□ 0.13
AC079248.1-201ENST00000427568 C1QBPQ07021 282 aaKnown RBP15.82■□□□□ 0.12
AC079248.1-201ENST00000427568 ZBTB22O15209 634 aa15.79■□□□□ 0.12
AC079248.1-201ENST00000427568 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.11
AC079248.1-201ENST00000427568 CACNB1Q02641 598 aaPredicted RBP15.7■□□□□ 0.1
AC079248.1-201ENST00000427568 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
AC079248.1-201ENST00000427568 CSRNP3Q8WYN3 585 aa15.62■□□□□ 0.09
AC079248.1-201ENST00000427568 RB1CC1Q8TDY2 1594 aa15.57■□□□□ 0.08
AC079248.1-201ENST00000427568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.07
AC079248.1-201ENST00000427568 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.07
AC079248.1-201ENST00000427568 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
AC079248.1-201ENST00000427568 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
AC079248.1-201ENST00000427568 UNC13AQ9UPW8 1703 aa15.41■□□□□ 0.06
AC079248.1-201ENST00000427568 NACADO15069 1562 aa15.4■□□□□ 0.06
AC079248.1-201ENST00000427568 APLP2Q06481 763 aa15.38■□□□□ 0.05
AC079248.1-201ENST00000427568 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
AC079248.1-201ENST00000427568 CAPN15O75808 1086 aa15.35■□□□□ 0.05
AC079248.1-201ENST00000427568 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
AC079248.1-201ENST00000427568 BICRAQ9NZM4 1560 aa15.29■□□□□ 0.04
AC079248.1-201ENST00000427568 ATXN8OSP0DMR3 200 aa15.24■□□□□ 0.03
AC079248.1-201ENST00000427568 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
AC079248.1-201ENST00000427568 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
AC079248.1-201ENST00000427568 DSG3P32926 999 aa15.22■□□□□ 0.03
AC079248.1-201ENST00000427568 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
AC079248.1-201ENST00000427568 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
AC079248.1-201ENST00000427568 ABCB7O75027 752 aa15.07■□□□□ 0
AC079248.1-201ENST00000427568 SLC24A1O60721 1099 aa15.06■□□□□ 0
AC079248.1-201ENST00000427568 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
AC079248.1-201ENST00000427568 POLA2Q14181 598 aa14.98□□□□□ -0.01
AC079248.1-201ENST00000427568 CECR2Q9BXF3 1484 aa14.93□□□□□ -0.02
AC079248.1-201ENST00000427568 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
AC079248.1-201ENST00000427568 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
AC079248.1-201ENST00000427568 ZCCHC6Q5VYS8 1495 aaKnown RBP14.81□□□□□ -0.04
AC079248.1-201ENST00000427568 DCAF1Q9Y4B6 1507 aa14.79□□□□□ -0.04
AC079248.1-201ENST00000427568 SCRIBQ14160 1630 aa14.79□□□□□ -0.04
AC079248.1-201ENST00000427568 DNAJC5Q9H3Z4 198 aa14.78□□□□□ -0.04
AC079248.1-201ENST00000427568 RTN4Q9NQC3 1192 aaKnown RBP14.77□□□□□ -0.04
AC079248.1-201ENST00000427568 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
AC079248.1-201ENST00000427568 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
AC079248.1-201ENST00000427568 AMER1Q5JTC6 1135 aaPredicted RBP14.62□□□□□ -0.07
AC079248.1-201ENST00000427568 FBLN2P98095 1184 aa14.55□□□□□ -0.08
AC079248.1-201ENST00000427568 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
AC079248.1-201ENST00000427568 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
AC079248.1-201ENST00000427568 CUX2O14529 1486 aa14.35□□□□□ -0.11
AC079248.1-201ENST00000427568 SPDYE2BA6NHP3 402 aa14.31□□□□□ -0.12
AC079248.1-201ENST00000427568 SPDYE6P0CI01 402 aa14.31□□□□□ -0.12
AC079248.1-201ENST00000427568 SPDYE2Q495Y8 402 aa14.31□□□□□ -0.12
AC079248.1-201ENST00000427568 AKT1S1Q96B36 256 aa14.25□□□□□ -0.13
AC079248.1-201ENST00000427568 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
AC079248.1-201ENST00000427568 SSUH2Q9Y2M2 353 aa14.24□□□□□ -0.13
AC079248.1-201ENST00000427568 ERCC6Q03468 1493 aa14.22□□□□□ -0.13
AC079248.1-201ENST00000427568 ZNF692Q9BU19 519 aaPredicted RBP14.2□□□□□ -0.14
AC079248.1-201ENST00000427568 NESP48681 1621 aa14.2□□□□□ -0.14
AC079248.1-201ENST00000427568 ATAD2BQ9ULI0 1458 aa14.17□□□□□ -0.14
AC079248.1-201ENST00000427568 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
AC079248.1-201ENST00000427568 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
AC079248.1-201ENST00000427568 THOC2Q8NI27 1593 aaKnown RBP14.11□□□□□ -0.15
AC079248.1-201ENST00000427568 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
AC079248.1-201ENST00000427568 SMARCA4P51532 1647 aa14.08□□□□□ -0.15
AC079248.1-201ENST00000427568 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
AC079248.1-201ENST00000427568 FKBP8Q14318 412 aa14.03□□□□□ -0.16
AC079248.1-201ENST00000427568 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
AC079248.1-201ENST00000427568 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
AC079248.1-201ENST00000427568 PROM2Q8N271 834 aa13.98□□□□□ -0.17
AC079248.1-201ENST00000427568 PEG3Q9GZU2 1588 aa13.97□□□□□ -0.17
AC079248.1-201ENST00000427568 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
AC079248.1-201ENST00000427568 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
AC079248.1-201ENST00000427568 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
AC079248.1-201ENST00000427568 SPDYE1Q8NFV5 336 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms